Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_T7_A03
(739 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 114 1e-26
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 112 4e-26
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 93 3e-20
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 57 2e-09
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 54 2e-08
SPAC6G10.04c |||20S proteasome component alpha 6 subunit Pre5|Sc... 29 0.013
SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr 1|||M... 32 0.074
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 32 0.074
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 32 0.098
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 31 0.13
SPBC15D4.01c ||SPBC2D10.21c|kinesin-like protein|Schizosaccharom... 31 0.23
SPCC16A11.08 |atg20||sorting nexin Atg20|Schizosaccharomyces pom... 30 0.40
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 29 0.69
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 29 0.91
SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces po... 28 1.2
SPBP23A10.05 |ssr4||SWI/SNF and RSC complex subunit Ssr4|Schizos... 28 1.6
SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|ch... 28 1.6
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 27 2.1
SPBC16A3.11 |eso1||sister chromatid cohesion protein Eso1|Schizo... 27 2.8
SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomy... 27 3.7
SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein homolog|Schizosacch... 27 3.7
SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr... 27 3.7
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 27 3.7
SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 4.9
SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr 1|... 26 4.9
SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces pomb... 26 4.9
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 26 4.9
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 26 4.9
SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10 |Schizos... 26 4.9
SPAC644.12 |cdc5||cell division control protein Cdc5|Schizosacch... 26 4.9
SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces po... 26 4.9
SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein Usp104|Schi... 26 4.9
SPAC1B2.04 |cox6||cytochrome c oxidase subunit VI|Schizosaccharo... 26 6.4
SPCC569.01c |||DUF1773 family protein 5|Schizosaccharomyces pomb... 26 6.4
SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomy... 26 6.4
SPAC323.07c |||MatE family transporter|Schizosaccharomyces pombe... 26 6.4
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 25 8.5
SPAC222.06 |mak16||nuclear HMG-like acidic protein Mak16|Schizos... 25 8.5
SPAC13C5.02 |dre4||DNA replication protein Dre4|Schizosaccharomy... 25 8.5
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 114 bits (275), Expect = 1e-26
Identities = 52/88 (59%), Positives = 69/88 (78%)
Frame = -3
Query: 569 KENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDE 390
K KITITNDKGRLSKEEI+RMV EAEKY+ ED+ + IQAKN LESY +S++++++D
Sbjct: 495 KTQKITITNDKGRLSKEEIDRMVAEAEKYKAEDEAESGRIQAKNHLESYAYSLRNSLDDP 554
Query: 389 KLKEKISDSDKQTILDKCNDTIKWLDSN 306
LK+K+ SDK+T+ +TI+WLDSN
Sbjct: 555 NLKDKVDASDKETVDKAVKETIEWLDSN 582
Score = 75.8 bits (178), Expect = 6e-15
Identities = 53/155 (34%), Positives = 76/155 (49%), Gaps = 2/155 (1%)
Frame = -1
Query: 685 FELTGIPPAPRGVPQIEVTFDIDANGILNVSAIREVHQXRRTRSPLPTTKVASPRKRSSV 506
FEL+GIPPAPRGVPQIEVTFD+DANGILNVSA+ + +T+ + T + +
Sbjct: 457 FELSGIPPAPRGVPQIEVTFDVDANGILNVSALEK--GTGKTQK-ITITNDKGRLSKEEI 513
Query: 505 WLMRQRSTETRMTSKRRPSRPRMHWNLTASA*SL-PWXXXXXXXXXXXXXXXXXXXXXXX 329
M + + + + R + +L + A SL
Sbjct: 514 DRMVAEAEKYKAEDEAESGRIQAKNHLESYAYSLRNSLDDPNLKDKVDASDKETVDKAVK 573
Query: 328 XXSGWIPTN-WPXKEEYEHKQKELEGICNPIITKM 227
W+ +N K+E+E KQKELE + NPI+ K+
Sbjct: 574 ETIEWLDSNTTAAKDEFEAKQKELESVANPIMAKI 608
Score = 30.3 bits (65), Expect = 0.30
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -2
Query: 738 QVFEGGRAMTKDNNLLG 688
QVFEG RA TKD NLLG
Sbjct: 439 QVFEGERARTKDCNLLG 455
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 112 bits (270), Expect = 4e-26
Identities = 51/88 (57%), Positives = 68/88 (77%)
Frame = -3
Query: 569 KENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDE 390
K KITITNDKGRLSKEEI+RMV+EAEKY+ ED+ + IQAKN LESY +S++++++D
Sbjct: 495 KTQKITITNDKGRLSKEEIDRMVSEAEKYKAEDEAETSRIQAKNHLESYAYSLRNSLDDP 554
Query: 389 KLKEKISDSDKQTILDKCNDTIKWLDSN 306
LK+K+ SDK+ I +TI+WLD N
Sbjct: 555 NLKDKVDASDKEAIDKAVKETIEWLDHN 582
Score = 81.0 bits (191), Expect = 2e-16
Identities = 56/155 (36%), Positives = 77/155 (49%), Gaps = 2/155 (1%)
Frame = -1
Query: 685 FELTGIPPAPRGVPQIEVTFDIDANGILNVSAIREVHQXRRTRSPLPTTKVASPRKRSSV 506
FEL+GIPPAPRGVPQIEVTFD+DANGILNVSA+ + +T+ + T + +
Sbjct: 457 FELSGIPPAPRGVPQIEVTFDVDANGILNVSALEK--GTGKTQK-ITITNDKGRLSKEEI 513
Query: 505 WLMRQRSTETRMTSKRRPSRPRMHWNLTASA*SL-PWXXXXXXXXXXXXXXXXXXXXXXX 329
M + + + + SR + +L + A SL
Sbjct: 514 DRMVSEAEKYKAEDEAETSRIQAKNHLESYAYSLRNSLDDPNLKDKVDASDKEAIDKAVK 573
Query: 328 XXSGWIPTN-WPXKEEYEHKQKELEGICNPIITKM 227
W+ N K+EYE KQKELEG+ NPI+ K+
Sbjct: 574 ETIEWLDHNTTAAKDEYEDKQKELEGVANPIMAKI 608
Score = 30.3 bits (65), Expect = 0.30
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -2
Query: 738 QVFEGGRAMTKDNNLLG 688
QVFEG RA TKD NLLG
Sbjct: 439 QVFEGERARTKDCNLLG 455
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 93.5 bits (222), Expect = 3e-20
Identities = 44/92 (47%), Positives = 61/92 (66%), Gaps = 1/92 (1%)
Frame = -3
Query: 584 RSPPXKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKS 405
+S K K+ I NDKGRLS+E+IERMV EAE++ ED KE I+A+N LE+Y +S+K
Sbjct: 520 KSGKGKPEKLVIKNDKGRLSEEDIERMVKEAEEFAEEDKILKERIEARNTLENYAYSLKG 579
Query: 404 TM-EDEKLKEKISDSDKQTILDKCNDTIKWLD 312
+DE+L K+ DKQ +LD D +WL+
Sbjct: 580 QFDDDEQLGGKVDPEDKQAVLDAVEDVAEWLE 611
Score = 62.9 bits (146), Expect = 5e-11
Identities = 26/33 (78%), Positives = 31/33 (93%)
Frame = -1
Query: 685 FELTGIPPAPRGVPQIEVTFDIDANGILNVSAI 587
F+L GIPPAPRGVPQIEVTF++DANG+L VSA+
Sbjct: 486 FDLRGIPPAPRGVPQIEVTFEVDANGVLTVSAV 518
Score = 32.3 bits (70), Expect = 0.074
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -2
Query: 738 QVFEGGRAMTKDNNLLG 688
QV+EG R +TKDNNLLG
Sbjct: 468 QVYEGERTLTKDNNLLG 484
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 57.2 bits (132), Expect = 2e-09
Identities = 24/32 (75%), Positives = 30/32 (93%)
Frame = -1
Query: 685 FELTGIPPAPRGVPQIEVTFDIDANGILNVSA 590
F+LTGI PAP+G PQIEV+FD+DA+GI+NVSA
Sbjct: 500 FQLTGIAPAPKGQPQIEVSFDVDADGIINVSA 531
Score = 50.0 bits (114), Expect = 3e-07
Identities = 28/80 (35%), Positives = 43/80 (53%)
Frame = -3
Query: 569 KENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDE 390
K++ IT+ G L+ EIE MV +AEKYR D +KE I+ N ES C ++S ++
Sbjct: 538 KDSSITVAGSSG-LTDSEIEAMVADAEKYRASDMARKEAIENGNRAESVCTDIESNLDIH 596
Query: 389 KLKEKISDSDKQTILDKCND 330
K+K+ + + K D
Sbjct: 597 --KDKLDQQAVEDLRSKITD 614
Score = 26.2 bits (55), Expect = 4.9
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -2
Query: 738 QVFEGGRAMTKDNNLLGN 685
+VF+G R + +DN L+GN
Sbjct: 482 RVFQGERELVRDNKLIGN 499
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 54.4 bits (125), Expect = 2e-08
Identities = 27/87 (31%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Frame = -3
Query: 557 ITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKE 378
I ITN G LS +I+ M+ A+K++ +D + ++AK+ LESY ++++T+ + +
Sbjct: 504 IEITNSVGHLSSTKIQEMIENADKFKQQDKDFAKKLEAKSQLESYISNIETTISEPNVMM 563
Query: 377 KISDSDKQTI---LDKCNDTIKWLDSN 306
K+ DK I L +C ++ D+N
Sbjct: 564 KLKRGDKSKIEAQLAECMSQLELEDTN 590
Score = 53.2 bits (122), Expect = 4e-08
Identities = 21/35 (60%), Positives = 29/35 (82%)
Frame = -1
Query: 685 FELTGIPPAPRGVPQIEVTFDIDANGILNVSAIRE 581
F+LTGIPP PRG ++E TF++DANGIL V+A+ +
Sbjct: 462 FQLTGIPPMPRGQAELEATFELDANGILKVTAVEK 496
>SPAC6G10.04c |||20S proteasome component alpha 6 subunit
Pre5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 29.1 bits (62), Expect(2) = 0.013
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -3
Query: 248 QSDNNEDVXRVPEESPEVCRASRAEHPEPEVP 153
Q+D E + ++ ++ P RASRA EP+ P
Sbjct: 226 QNDTKEWLDKLGDKGPAAARASRAAAEEPQAP 257
Score = 24.6 bits (51), Expect(2) = 0.013
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = -3
Query: 473 DDKQKETI-QAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLD 312
D ++E I A AL + E+ I +K T+ D+ NDT +WLD
Sbjct: 181 DSSREELILSALRALRDTLSKDQELTEENVSISVIGKDEKYTLYDQ-NDTKEWLD 234
>SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr
1|||Manual
Length = 468
Score = 32.3 bits (70), Expect = 0.074
Identities = 15/61 (24%), Positives = 35/61 (57%)
Frame = -3
Query: 521 EEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILD 342
EE++ +NEA+K NE ++ I+ +L+ +++ +++ + + S KQT+++
Sbjct: 19 EELDAKINEAKKRFNEHKEKLGAIRGGGSLQEKNAELRAELDNIRNAQAAIRSSKQTLIN 78
Query: 341 K 339
K
Sbjct: 79 K 79
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 32.3 bits (70), Expect = 0.074
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = -3
Query: 557 ITITNDKGRLSKEEIERMVNEAEKYRNEDDKQ-KETIQAKNALESYCFSMKSTMED 393
++++ + RL E +E+ EAE DK ET+ KNALE Y + ++ ++D
Sbjct: 542 LSVSVQEDRLPTEVLEKY-REAEHQMIATDKLVAETVDRKNALEEYIYDTRAKLDD 596
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 31.9 bits (69), Expect = 0.098
Identities = 25/107 (23%), Positives = 50/107 (46%), Gaps = 1/107 (0%)
Frame = -3
Query: 677 DRDPT-GAAWRASN*GHLRHRCQRYPQRFRYSRSPPXKENKITITNDKGRLSKEEIERMV 501
+ PT G+ A LR + + Q + + + + +K + +KEE+E +
Sbjct: 1556 EHSPTQGSLENADEIARLRSQLESTKQYYEKEKETEILAARSELVAEKEK-TKEELENQL 1614
Query: 500 NEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSD 360
NE + E ++Q + ++N ++ +K +E EKLKE ++ D
Sbjct: 1615 NEKSQRIKELEEQAQKNSSENTHDNIDDMIKQQVE-EKLKENSANFD 1660
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 31.5 bits (68), Expect = 0.13
Identities = 21/73 (28%), Positives = 33/73 (45%)
Frame = -3
Query: 539 KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSD 360
+GR + + N+ E + DDKQ + KN+LE+ M+ + E K D +
Sbjct: 1259 RGRQKTSIVAKYRNKRELPEDSDDKQDTASKDKNSLETIDEKMEDASKIEG-DAKTGDDN 1317
Query: 359 KQTILDKCNDTIK 321
+ LDK D K
Sbjct: 1318 EMEDLDKMEDLEK 1330
>SPBC15D4.01c ||SPBC2D10.21c|kinesin-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 30.7 bits (66), Expect = 0.23
Identities = 26/128 (20%), Positives = 57/128 (44%), Gaps = 3/128 (2%)
Frame = -3
Query: 521 EEIERMVNEAEKYRNEDDKQKETI-QAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 345
+++E+M +K ++E+ ++ ETI Q + +E ++S +E+E +KE + +
Sbjct: 491 QKLEKMGGWMKKLQDENSEKTETIAQLEQIIEELHEELRS-LEEESIKESSATQQNENQH 549
Query: 344 DKCNDTIKWLDSNXXXXXXXXXXXAERIGRH--LQSDNNEDVXRVPEESPEVCRASRAEH 171
+ + + + D + + +Q+ N++D VP SP+ S +
Sbjct: 550 KRSSRKLLYEDKQAIQEAHTINTKRKLWPQSTLIQAPNSDDEENVPSPSPKKKVVSPIKP 609
Query: 170 PEPEVPPP 147
P PP
Sbjct: 610 LSPSRRPP 617
>SPCC16A11.08 |atg20||sorting nexin Atg20|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 534
Score = 29.9 bits (64), Expect = 0.40
Identities = 20/67 (29%), Positives = 30/67 (44%)
Frame = -3
Query: 251 LQSDNNEDVXRVPEESPEVCRASRAEHPEPEVPPPGLEALAPPSRRSIKPTFHTTRKPTC 72
L D+N D R+P P H +P +L+PPS R++KP H+ P+
Sbjct: 146 LPKDSNTDPLRLP---PIATEHDPFAHLRSSMPLVMANSLSPPSSRALKP-IHSLSNPST 201
Query: 71 NNHLVTS 51
+ L S
Sbjct: 202 ASSLEPS 208
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 29.1 bits (62), Expect = 0.69
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 539 KGRLSKEEIERMVNEAEKYRNEDD 468
KG LSKEE+ER V +A K N D
Sbjct: 525 KGTLSKEELERRVYDAAKLANAYD 548
>SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 28.7 bits (61), Expect = 0.91
Identities = 22/68 (32%), Positives = 34/68 (50%)
Frame = -3
Query: 569 KENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDE 390
K+ K T D SKEE+E +V E E D +Q + K+ L++ F ++
Sbjct: 530 KKGKHTQIEDPTAASKEELENLVREDE----NDSEQLDHFDMKSILKAEKFK-----KNR 580
Query: 389 KLKEKISD 366
KLK+K S+
Sbjct: 581 KLKKKASN 588
>SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 28.3 bits (60), Expect = 1.2
Identities = 20/85 (23%), Positives = 36/85 (42%)
Frame = -3
Query: 575 PXKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTME 396
P + I +T + R S E V + E ++D + +++NA + S +
Sbjct: 234 PDLSSLIRLTRSRARSSNEA--SYVEKDESSNSDDSISYKRRRSRNAANRITDYVDSDLS 291
Query: 395 DEKLKEKISDSDKQTILDKCNDTIK 321
+ +KEK S +K DK + K
Sbjct: 292 ESSMKEKQSKIEKYMKSDKSSKNFK 316
>SPBP23A10.05 |ssr4||SWI/SNF and RSC complex subunit
Ssr4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 395
Score = 27.9 bits (59), Expect = 1.6
Identities = 17/71 (23%), Positives = 35/71 (49%)
Frame = -3
Query: 578 PPXKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTM 399
PP + + G+ K+ E++V + +KY++ T N L+ + ++KS
Sbjct: 310 PPALWQEPNSMEELGKELKDNKEQLVKQDQKYQSLQGDLSYTDSMSNLLKEFS-NIKSAE 368
Query: 398 EDEKLKEKISD 366
E + L++KI +
Sbjct: 369 ECDVLQKKIEE 379
>SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 764
Score = 27.9 bits (59), Expect = 1.6
Identities = 18/58 (31%), Positives = 24/58 (41%)
Frame = -3
Query: 602 QRFRYSRSPPXKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALE 429
Q+ R R P KE +G L E E NEA++ NE+ E +N E
Sbjct: 72 QQARDGRQSPSKEAPF----GEGELKLENFENQENEADEAENEETSYSEQNHTENTEE 125
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 27.5 bits (58), Expect = 2.1
Identities = 15/55 (27%), Positives = 29/55 (52%)
Frame = -3
Query: 614 QRYPQRFRYSRSPPXKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETI 450
+ PQ+ RS P EN+ + +S ++ R ++ E Y ++D+ +KET+
Sbjct: 1047 EELPQKESQERSSPSPENQDSTPLAPKSVSPKQAARTLDIDENY-DDDEGEKETV 1100
>SPBC16A3.11 |eso1||sister chromatid cohesion protein
Eso1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 27.1 bits (57), Expect = 2.8
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -3
Query: 506 MVNEAEKYRNEDDKQKETIQAKNALESYCFSMKST 402
M+++ RN+ +KQ TI KNA++ Y S+K T
Sbjct: 247 MLSKLVSSRNKPNKQ--TILTKNAIQDYLVSLKIT 279
>SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 26.6 bits (56), Expect = 3.7
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = +3
Query: 594 ETLRIPLASMSKVTSI*GTPRGAGGIP 674
E L PLA MS TSI G G GG P
Sbjct: 76 EVLVDPLADMSAGTSIMGNNFGFGGFP 102
>SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2609
Score = 26.6 bits (56), Expect = 3.7
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Frame = +3
Query: 186 SPAYLRGLLRHPGYIFVIIGLQMPSNSFCLCSYSSLXGQLVGIQPLDGVVALVEDGLL-- 359
+PA+L LLR + I G+++ + S C SS + Q G + ++ D L
Sbjct: 981 TPAWLLFLLRQQDIHYFICGIRLLNQSICSLG-SSFLSKF--SQKFHGFL-ILHDNLKDH 1036
Query: 360 VRVRDLFLELLILHGRLHAEAVRFQ 434
+ + +L+L LL L L +V+F+
Sbjct: 1037 IHLEELWLNLLFLSLGLGIRSVQFR 1061
>SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 506
Score = 26.6 bits (56), Expect = 3.7
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = -3
Query: 476 EDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWL 315
E DK ET+ K A+ S+ +++++++ K+S D L+ CN+ + L
Sbjct: 242 ETDKFDETM--KEAILSF-----EDLKEQEIRRKVSSDDVHNYLESCNNHLSML 288
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 26.6 bits (56), Expect = 3.7
Identities = 17/58 (29%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = -3
Query: 566 ENKITITNDKGRLSKEEIERM-VNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTME 396
++++TIT++ S E++E++ N AEK + E + K + ++ LES S + +E
Sbjct: 288 KSQMTITDE----SSEDLEKLHSNFAEKVKEEQELYKSLEKKRSDLESLLKSRRELLE 341
>SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 751
Score = 26.2 bits (55), Expect = 4.9
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 9/74 (12%)
Frame = -3
Query: 524 KEEIERMVNEAEKYRNEDD---------KQKETIQAKNALESYCFSMKSTMEDEKLKEKI 372
KE ER+ E + NED K+K IQ KN+ + + ST E K+ I
Sbjct: 487 KETPERLCTENQSTENEDQANLKESELPKEKSDIQPKNSRSTIEYIETSTRVYEMPKDTI 546
Query: 371 SDSDKQTILDKCND 330
K +I + +D
Sbjct: 547 PSRFKTSISTEVHD 560
>SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 26.2 bits (55), Expect = 4.9
Identities = 21/88 (23%), Positives = 35/88 (39%), Gaps = 2/88 (2%)
Frame = -3
Query: 596 FRYSRSPPXKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCF 417
F + P K T+ + + E+ + E EK + +A+ A
Sbjct: 205 FSSIQKPKLKAEGSTLKGQALKKTLEDTWNNLTEEEKKPYHEGLLAAREKAREARRRRSA 264
Query: 416 SMKSTMEDEKLKEKISDSDKQ--TILDK 339
+ +E EK KEK D D++ T+ DK
Sbjct: 265 QNSAKLEKEKAKEKQKDKDQEQDTVSDK 292
>SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 457
Score = 26.2 bits (55), Expect = 4.9
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = -3
Query: 521 EEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQT 351
+EIE M + + + D + + N + CFS +ED K KE +SD K +
Sbjct: 215 KEIEEMKDSNGMFCDADHVPLQGQELCNGILEECFSF---LEDAKTKEGLSDEMKSS 268
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 26.2 bits (55), Expect = 4.9
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = -3
Query: 545 NDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNA-LESYCFSMKSTMEDEKLKEKIS 369
+DK + E + E YRNE +E++ +N L S +++ +E+ K ++++S
Sbjct: 635 DDKMKSIDESTRELEKNYEVYRNEMTAIQESLSKRNQDLLSEMEAIRKELENSKYQQQLS 694
Query: 368 DSDKQT 351
+D+ T
Sbjct: 695 -TDRLT 699
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 26.2 bits (55), Expect = 4.9
Identities = 21/85 (24%), Positives = 34/85 (40%)
Frame = -3
Query: 584 RSPPXKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKS 405
+S K N D+ + +EE E ++EK ++ K + KNA ++ M
Sbjct: 80 KSKKAKANAFEAFADEQSVEEEEEE----DSEKPVRKNKKSSKKASPKNAFDALADDMDD 135
Query: 404 TMEDEKLKEKISDSDKQTILDKCND 330
DE+ E S K+ K D
Sbjct: 136 LSLDEEESESSEKSKKKKKKSKSKD 160
>SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1649
Score = 26.2 bits (55), Expect = 4.9
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = -3
Query: 557 ITITND-KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLK 381
I + D K S I V + E+ + D T+Q K +S FS K + E L
Sbjct: 383 IPVNQDFKALQSYRRILDSVIQPERKEGKLDNLINTLQDKK--KSSTFSKK---DREVLL 437
Query: 380 EKISDSDKQTILDKC 336
+KIS+ D QT ++C
Sbjct: 438 KKISEIDSQTSFEQC 452
>SPAC644.12 |cdc5||cell division control protein
Cdc5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 757
Score = 26.2 bits (55), Expect = 4.9
Identities = 15/57 (26%), Positives = 25/57 (43%)
Frame = -1
Query: 613 NGILNVSAIREVHQXRRTRSPLPTTKVASPRKRSSVWLMRQRSTETRMTSKRRPSRP 443
NGI N E + P P +V P K + MR+ + +M+ +R+ + P
Sbjct: 259 NGIRNNEMESEGRKFGHFEKPKPIDRVKKPNKDAQEEKMRRLAEAEQMSKRRKLNLP 315
>SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 26.2 bits (55), Expect = 4.9
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3
Query: 212 EESPEVCRASRAEHPEPE 159
EE+P AS EHPEP+
Sbjct: 244 EEAPAAAAASENEHPEPK 261
>SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein
Usp104|Schizosaccharomyces pombe|chr 1|||Manual
Length = 695
Score = 26.2 bits (55), Expect = 4.9
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = -3
Query: 527 SKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKS 405
S+ E +++ E ++ ED+KQ E + K AL+ +C +++
Sbjct: 299 SETEQQQLFFEYKQKLLEDEKQLEKDRRKEALDDFCSLLRN 339
>SPAC1B2.04 |cox6||cytochrome c oxidase subunit
VI|Schizosaccharomyces pombe|chr 1|||Manual
Length = 140
Score = 25.8 bits (54), Expect = 6.4
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -1
Query: 313 IPTNWPXKEEYEHKQKELEGICNPI 239
I P KE+Y+ KEL+ +CN +
Sbjct: 106 IKVKLPTKEQYQAYVKELKPVCNEL 130
>SPCC569.01c |||DUF1773 family protein 5|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 323
Score = 25.8 bits (54), Expect = 6.4
Identities = 22/67 (32%), Positives = 30/67 (44%)
Frame = -1
Query: 679 LTGIPPAPRGVPQIEVTFDIDANGILNVSAIREVHQXRRTRSPLPTTKVASPRKRSSVWL 500
L G PA G+P IE DID + ++ + SP T K+ R R +V L
Sbjct: 253 LNGNEPANSGLPPIERVEDIDE--LSKEQCVQYLKGYGIMFSPAETIKL-KKRLRDAVGL 309
Query: 499 MRQRSTE 479
+ STE
Sbjct: 310 WSKASTE 316
>SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 991
Score = 25.8 bits (54), Expect = 6.4
Identities = 13/61 (21%), Positives = 31/61 (50%)
Frame = -3
Query: 524 KEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 345
+++I + + + E RNE+ ++++ ++ ESY ++ E ++ S K T +
Sbjct: 391 EDDIFKRLKQQEDRRNENYRRRQQRESNQESESYVDNVVIQRSVETQSTEVVTSSKSTSV 450
Query: 344 D 342
D
Sbjct: 451 D 451
>SPAC323.07c |||MatE family transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 25.8 bits (54), Expect = 6.4
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 250 KCLPILSACAHTPPXSASWLESSHLMVSLHLSRMV 354
+CL IL A H P + WL H+++ LH MV
Sbjct: 174 RCLLIL-AVLHIP-VALIWLNLEHILIFLHQDPMV 206
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 25.4 bits (53), Expect = 8.5
Identities = 14/63 (22%), Positives = 29/63 (46%)
Frame = -3
Query: 524 KEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 345
+EE E+ + E K R + DK++E + + LE + + + K+ + + +
Sbjct: 694 REEEEKRILEERKRREKLDKEEEERRRRELLEKESEEKERRLREAKIAAFFAPNQTKEGS 753
Query: 344 DKC 336
D C
Sbjct: 754 DGC 756
>SPAC222.06 |mak16||nuclear HMG-like acidic protein
Mak16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 25.4 bits (53), Expect = 8.5
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = -3
Query: 563 NKITITNDKGRLSKEEIERMVNEAE-KYRNEDDKQKETIQAKNALESYCFSMKSTMEDEK 387
NK+ + G + + E E EAE ++ ++D+ ++E ++ L S S E+E+
Sbjct: 187 NKVLAARE-GLIDEGEEEEEREEAELEFVSDDEDEEEISDLEDWLGSDQSMETSESEEEE 245
Query: 386 LKEKISDSDK 357
E SD D+
Sbjct: 246 SSESESDEDE 255
>SPAC13C5.02 |dre4||DNA replication protein Dre4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 411
Score = 25.4 bits (53), Expect = 8.5
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -3
Query: 443 KNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKW 318
K E YC S+ ST + + K +SD T+L T+ W
Sbjct: 284 KEVFEEYCKSVVSTKKITRRKNTLSDF--WTLLHSLPSTLLW 323
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,736,646
Number of Sequences: 5004
Number of extensions: 53267
Number of successful extensions: 269
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 267
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 349251756
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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