Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP09_FL5_P22
         (831 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              25   0.65 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   3.5  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   4.6  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    22   6.0  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 25.4 bits (53), Expect = 0.65
 Identities = 13/45 (28%), Positives = 19/45 (42%), Gaps = 3/45 (6%)
 Frame = +2

Query: 449  QTFPAHNELHAAQRRPPISQTCRGQNQERGGEK---EKNGRDSQI 574
            QTFP     H+    PP+          R G +    +NGR S++
Sbjct: 1746 QTFPHPGNGHSGTMGPPVGHPTNASAHSRSGSQSMPRQNGRYSRV 1790


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 12/46 (26%), Positives = 24/46 (52%)
 Frame = +2

Query: 449 QTFPAHNELHAAQRRPPISQTCRGQNQERGGEKEKNGRDSQIEGSQ 586
           Q+ P H +LH  Q   P +Q  + Q Q++  ++++  +  Q +  Q
Sbjct: 806 QSQPPHQQLHHHQSTHPQAQ-AQAQPQQQQQQQQQQPQQQQQQQQQ 850


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -1

Query: 162 FCFLRYRRAGWLNQVLTNL 106
           FC+ R   A W N V  NL
Sbjct: 538 FCYFRRNAATWKNAVRHNL 556


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +1

Query: 187 SSTSCSWAVTSY 222
           S + C+W +TSY
Sbjct: 66  SGSKCTWTITSY 77


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,321
Number of Sequences: 438
Number of extensions: 3864
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26581563
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)