Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_FL5_P21
(792 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 39 0.005
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 39 0.005
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 39 0.005
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 35 0.077
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 35 0.077
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 35 0.077
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 34 0.10
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 34 0.10
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 33 0.18
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 33 0.18
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 33 0.18
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 33 0.31
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 32 0.54
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 30 1.7
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 30 1.7
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 2.9
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 2.9
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 5.0
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 5.0
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 28 8.8
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 28 8.8
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 28 8.8
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 28 8.8
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 28 8.8
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 28 8.8
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 38.7 bits (86), Expect = 0.005
Identities = 23/67 (34%), Positives = 23/67 (34%), Gaps = 2/67 (2%)
Frame = +3
Query: 390 PXXGXPPXXXXKXGGXPPRGGXXPPPPXXFF--*KNHPPPXXXGGGGXXPPXXXCXXGGX 563
P G PP G P GG PPPP PPP GG PP GG
Sbjct: 721 PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGF 780
Query: 564 AXXXXPP 584
PP
Sbjct: 781 KGGPPPP 787
Score = 37.1 bits (82), Expect = 0.014
Identities = 20/52 (38%), Positives = 20/52 (38%)
Frame = +3
Query: 381 PQXPXXGXPPXXXXKXGGXPPRGGXXPPPPXXFF*KNHPPPXXXGGGGXXPP 536
P P G PP PP GG PPPP PPP GG PP
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPP-------PPPGGFKGGPPPPP 788
Score = 32.7 bits (71), Expect = 0.31
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = +3
Query: 390 PXXGXPPXXXXKXGGXPPRGGXXPPPPXXFF*KNHPPPXXXG 515
P G PP GG PP PPPP F PPP G
Sbjct: 753 PISGGPPPPPPPPGGCPP---PPPPPPPGGFKGGPPPPPPPG 791
Score = 28.7 bits (61), Expect = 5.0
Identities = 18/44 (40%), Positives = 18/44 (40%)
Frame = -3
Query: 559 PPXXHXKXGGXXPPPPXXXGGGWFF*KXXXGGGGXXPPRGGXPP 428
PP GG PPPP GG GG PP GG PP
Sbjct: 716 PPGLPPITGGPPPPPPP---GGL---PPITGGPPPPPPPGGLPP 753
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 38.7 bits (86), Expect = 0.005
Identities = 23/67 (34%), Positives = 23/67 (34%), Gaps = 2/67 (2%)
Frame = +3
Query: 390 PXXGXPPXXXXKXGGXPPRGGXXPPPPXXFF--*KNHPPPXXXGGGGXXPPXXXCXXGGX 563
P G PP G P GG PPPP PPP GG PP GG
Sbjct: 721 PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGF 780
Query: 564 AXXXXPP 584
PP
Sbjct: 781 KGGPPPP 787
Score = 37.1 bits (82), Expect = 0.014
Identities = 20/52 (38%), Positives = 20/52 (38%)
Frame = +3
Query: 381 PQXPXXGXPPXXXXKXGGXPPRGGXXPPPPXXFF*KNHPPPXXXGGGGXXPP 536
P P G PP PP GG PPPP PPP GG PP
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPP-------PPPGGFKGGPPPPP 788
Score = 32.7 bits (71), Expect = 0.31
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = +3
Query: 390 PXXGXPPXXXXKXGGXPPRGGXXPPPPXXFF*KNHPPPXXXG 515
P G PP GG PP PPPP F PPP G
Sbjct: 753 PISGGPPPPPPPPGGCPP---PPPPPPPGGFKGGPPPPPPPG 791
Score = 28.7 bits (61), Expect = 5.0
Identities = 18/44 (40%), Positives = 18/44 (40%)
Frame = -3
Query: 559 PPXXHXKXGGXXPPPPXXXGGGWFF*KXXXGGGGXXPPRGGXPP 428
PP GG PPPP GG GG PP GG PP
Sbjct: 716 PPGLPPITGGPPPPPPP---GGL---PPITGGPPPPPPPGGLPP 753
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 38.7 bits (86), Expect = 0.005
Identities = 23/67 (34%), Positives = 23/67 (34%), Gaps = 2/67 (2%)
Frame = +3
Query: 390 PXXGXPPXXXXKXGGXPPRGGXXPPPPXXFF--*KNHPPPXXXGGGGXXPPXXXCXXGGX 563
P G PP G P GG PPPP PPP GG PP GG
Sbjct: 304 PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGF 363
Query: 564 AXXXXPP 584
PP
Sbjct: 364 KGGPPPP 370
Score = 37.1 bits (82), Expect = 0.014
Identities = 20/52 (38%), Positives = 20/52 (38%)
Frame = +3
Query: 381 PQXPXXGXPPXXXXKXGGXPPRGGXXPPPPXXFF*KNHPPPXXXGGGGXXPP 536
P P G PP PP GG PPPP PPP GG PP
Sbjct: 327 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPP-------PPPGGFKGGPPPPP 371
Score = 32.7 bits (71), Expect = 0.31
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = +3
Query: 390 PXXGXPPXXXXKXGGXPPRGGXXPPPPXXFF*KNHPPPXXXG 515
P G PP GG PP PPPP F PPP G
Sbjct: 336 PISGGPPPPPPPPGGCPP---PPPPPPPGGFKGGPPPPPPPG 374
Score = 28.7 bits (61), Expect = 5.0
Identities = 18/44 (40%), Positives = 18/44 (40%)
Frame = -3
Query: 559 PPXXHXKXGGXXPPPPXXXGGGWFF*KXXXGGGGXXPPRGGXPP 428
PP GG PPPP GG GG PP GG PP
Sbjct: 299 PPGLPPITGGPPPPPPP---GGL---PPITGGPPPPPPPGGLPP 336
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 34.7 bits (76), Expect = 0.077
Identities = 20/51 (39%), Positives = 20/51 (39%), Gaps = 2/51 (3%)
Frame = +3
Query: 438 PPRGGXXPPPPXXFF*KNHPPPXXXGGGGXXPPXXXC--XXGGXAXXXXPP 584
PPRGG PPP PP GGGG PP GG PP
Sbjct: 782 PPRGGPGAPPPPGM---RPPPGAPGGGGGMYPPLIPTRPGPGGPPPNMAPP 829
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 34.7 bits (76), Expect = 0.077
Identities = 20/51 (39%), Positives = 20/51 (39%), Gaps = 2/51 (3%)
Frame = +3
Query: 438 PPRGGXXPPPPXXFF*KNHPPPXXXGGGGXXPPXXXC--XXGGXAXXXXPP 584
PPRGG PPP PP GGGG PP GG PP
Sbjct: 782 PPRGGPGAPPPPGM---RPPPGAPGGGGGMYPPLIPTRPGPGGPPPNMAPP 829
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 34.7 bits (76), Expect = 0.077
Identities = 17/49 (34%), Positives = 19/49 (38%)
Frame = -3
Query: 535 GGXXPPPPXXXGGGWFF*KXXXGGGGXXPPRGGXPPXFXXXXGGXPXXG 389
GG PPPP G + G GG PP G P + G P G
Sbjct: 407 GGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPPVG 455
Score = 31.5 bits (68), Expect = 0.71
Identities = 19/53 (35%), Positives = 19/53 (35%), Gaps = 2/53 (3%)
Frame = +3
Query: 381 PQXPXXGXPPXXXXKXGGXPPRGGXXP--PPPXXFF*KNHPPPXXXGGGGXXP 533
P P PP G PP GG PPP F PPP G G P
Sbjct: 417 PGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPPVGAPPPGAAGAPGGNP 469
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 34.3 bits (75), Expect = 0.10
Identities = 16/33 (48%), Positives = 16/33 (48%)
Frame = +3
Query: 438 PPRGGXXPPPPXXFF*KNHPPPXXXGGGGXXPP 536
PPRGG PPP PP GGGG PP
Sbjct: 782 PPRGGPGAPPPPGM---RPPPGAPGGGGGMYPP 811
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 34.3 bits (75), Expect = 0.10
Identities = 16/33 (48%), Positives = 16/33 (48%)
Frame = +3
Query: 438 PPRGGXXPPPPXXFF*KNHPPPXXXGGGGXXPP 536
PPRGG PPP PP GGGG PP
Sbjct: 782 PPRGGPGAPPPPGM---RPPPGAPGGGGGMYPP 811
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.5 bits (73), Expect = 0.18
Identities = 18/51 (35%), Positives = 18/51 (35%)
Frame = +3
Query: 381 PQXPXXGXPPXXXXKXGGXPPRGGXXPPPPXXFF*KNHPPPXXXGGGGXXP 533
P G PP PPR G PPPP PPP GG P
Sbjct: 247 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPP-----TGSPPPPPAGGSPPPP 292
Score = 33.1 bits (72), Expect = 0.23
Identities = 19/55 (34%), Positives = 20/55 (36%), Gaps = 4/55 (7%)
Frame = +3
Query: 381 PQXPXXGXPPXXXXKXGGXPPRGGXXPPPPXXFF*KNHPP----PXXXGGGGXXP 533
P P G PP PPR G PPPP + PP P GG P
Sbjct: 272 PPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPP---RGSPPTGSLPPPQAGGSPPP 323
Score = 31.9 bits (69), Expect = 0.54
Identities = 21/67 (31%), Positives = 21/67 (31%)
Frame = +3
Query: 384 QXPXXGXPPXXXXKXGGXPPRGGXXPPPPXXFF*KNHPPPXXXGGGGXXPPXXXCXXGGX 563
Q P G PP G P G PPPP PPP G PP
Sbjct: 230 QAPPAGSPPPPPPPKGSPPLAGSGSPPPPPA---AGSPPPPRT--GSPPPPPTGSPPPPP 284
Query: 564 AXXXXPP 584
A PP
Sbjct: 285 AGGSPPP 291
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/55 (34%), Positives = 19/55 (34%), Gaps = 3/55 (5%)
Frame = +3
Query: 381 PQXPXXGXPPXXXXKXGGXPPRGGXXPPPPXXFF*KNHP---PPXXXGGGGXXPP 536
P P G PP PP G PPPP P PP GG PP
Sbjct: 239 PPPPPKGSPPLAGSGSPPPPPAAG-SPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 292
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.5 bits (73), Expect = 0.18
Identities = 18/51 (35%), Positives = 18/51 (35%)
Frame = +3
Query: 381 PQXPXXGXPPXXXXKXGGXPPRGGXXPPPPXXFF*KNHPPPXXXGGGGXXP 533
P G PP PPR G PPPP PPP GG P
Sbjct: 268 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPP-----TGSPPPPPAGGSPPPP 313
Score = 33.1 bits (72), Expect = 0.23
Identities = 19/55 (34%), Positives = 20/55 (36%), Gaps = 4/55 (7%)
Frame = +3
Query: 381 PQXPXXGXPPXXXXKXGGXPPRGGXXPPPPXXFF*KNHPP----PXXXGGGGXXP 533
P P G PP PPR G PPPP + PP P GG P
Sbjct: 293 PPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPP---RGSPPTGSLPPPQAGGSPPP 344
Score = 31.9 bits (69), Expect = 0.54
Identities = 21/67 (31%), Positives = 21/67 (31%)
Frame = +3
Query: 384 QXPXXGXPPXXXXKXGGXPPRGGXXPPPPXXFF*KNHPPPXXXGGGGXXPPXXXCXXGGX 563
Q P G PP G P G PPPP PPP G PP
Sbjct: 251 QAPPAGSPPPPPPPKGSPPLAGSGSPPPPPA---AGSPPPPRT--GSPPPPPTGSPPPPP 305
Query: 564 AXXXXPP 584
A PP
Sbjct: 306 AGGSPPP 312
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/55 (34%), Positives = 19/55 (34%), Gaps = 3/55 (5%)
Frame = +3
Query: 381 PQXPXXGXPPXXXXKXGGXPPRGGXXPPPPXXFF*KNHP---PPXXXGGGGXXPP 536
P P G PP PP G PPPP P PP GG PP
Sbjct: 260 PPPPPKGSPPLAGSGSPPPPPAAG-SPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 313
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.5 bits (73), Expect = 0.18
Identities = 18/51 (35%), Positives = 18/51 (35%)
Frame = +3
Query: 381 PQXPXXGXPPXXXXKXGGXPPRGGXXPPPPXXFF*KNHPPPXXXGGGGXXP 533
P G PP PPR G PPPP PPP GG P
Sbjct: 253 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPP-----TGSPPPPPAGGSPPPP 298
Score = 33.1 bits (72), Expect = 0.23
Identities = 19/55 (34%), Positives = 20/55 (36%), Gaps = 4/55 (7%)
Frame = +3
Query: 381 PQXPXXGXPPXXXXKXGGXPPRGGXXPPPPXXFF*KNHPP----PXXXGGGGXXP 533
P P G PP PPR G PPPP + PP P GG P
Sbjct: 278 PPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPP---RGSPPTGSLPPPQAGGSPPP 329
Score = 31.9 bits (69), Expect = 0.54
Identities = 21/67 (31%), Positives = 21/67 (31%)
Frame = +3
Query: 384 QXPXXGXPPXXXXKXGGXPPRGGXXPPPPXXFF*KNHPPPXXXGGGGXXPPXXXCXXGGX 563
Q P G PP G P G PPPP PPP G PP
Sbjct: 236 QAPPAGSPPPPPPPKGSPPLAGSGSPPPPPA---AGSPPPPRT--GSPPPPPTGSPPPPP 290
Query: 564 AXXXXPP 584
A PP
Sbjct: 291 AGGSPPP 297
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/55 (34%), Positives = 19/55 (34%), Gaps = 3/55 (5%)
Frame = +3
Query: 381 PQXPXXGXPPXXXXKXGGXPPRGGXXPPPPXXFF*KNHP---PPXXXGGGGXXPP 536
P P G PP PP G PPPP P PP GG PP
Sbjct: 245 PPPPPKGSPPLAGSGSPPPPPAAG-SPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 298
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 32.7 bits (71), Expect = 0.31
Identities = 20/55 (36%), Positives = 20/55 (36%), Gaps = 3/55 (5%)
Frame = +3
Query: 381 PQXPXXGXPPXXXXKXGGXPPRG---GXXPPPPXXFF*KNHPPPXXXGGGGXXPP 536
P G PP GG PP G PPPP F PPP G PP
Sbjct: 76 PPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGLGVAPQPP 130
Score = 32.3 bits (70), Expect = 0.41
Identities = 18/49 (36%), Positives = 18/49 (36%)
Frame = +3
Query: 390 PXXGXPPXXXXKXGGXPPRGGXXPPPPXXFF*KNHPPPXXXGGGGXXPP 536
P PP PP G PPPP F PPP GG PP
Sbjct: 61 PSFFIPPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPP 109
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 31.9 bits (69), Expect = 0.54
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = +3
Query: 390 PXXGXPPXXXXKXGGXPPRGGXXPPPPXXFF*KNHPPPXXXG 515
P G PP PP G PPPP + PPP G
Sbjct: 72 PFMGGPPPHHQYHLQYPPPHGLGPPPPPPHYYTQPPPPPQSG 113
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/52 (36%), Positives = 19/52 (36%)
Frame = +3
Query: 381 PQXPXXGXPPXXXXKXGGXPPRGGXXPPPPXXFF*KNHPPPXXXGGGGXXPP 536
P P G P PP G PPPP F PPP G G PP
Sbjct: 272 PHHPY-GPPHPMHHPYAMMPPPFGFFPPPPRGHF---PPPPPHFMGRGMPPP 319
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/52 (36%), Positives = 19/52 (36%)
Frame = +3
Query: 381 PQXPXXGXPPXXXXKXGGXPPRGGXXPPPPXXFF*KNHPPPXXXGGGGXXPP 536
P P G P PP G PPPP F PPP G G PP
Sbjct: 272 PHHPY-GPPHPMHHPYAMMPPPFGFFPPPPRGHF---PPPPPHFMGRGMPPP 319
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/51 (35%), Positives = 19/51 (37%), Gaps = 5/51 (9%)
Frame = +3
Query: 399 GXPPXXXXKXGGXPPRGGXXPPPPXXF-F*KNHPPP----XXXGGGGXXPP 536
G PP G P GG PPPP + PPP G G PP
Sbjct: 315 GMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPP 365
Score = 28.7 bits (61), Expect = 5.0
Identities = 21/68 (30%), Positives = 22/68 (32%), Gaps = 8/68 (11%)
Frame = +3
Query: 405 PPXXXXKXGGXPPRGGXXPPPPXXFF*K----NHPPPXXXG----GGGXXPPXXXCXXGG 560
PP + G P G PPPP F PPP G GG PP G
Sbjct: 300 PPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAG 359
Query: 561 XAXXXXPP 584
PP
Sbjct: 360 PGMYPPPP 367
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/51 (35%), Positives = 19/51 (37%), Gaps = 5/51 (9%)
Frame = +3
Query: 399 GXPPXXXXKXGGXPPRGGXXPPPPXXF-F*KNHPPP----XXXGGGGXXPP 536
G PP G P GG PPPP + PPP G G PP
Sbjct: 325 GMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPP 375
Score = 28.7 bits (61), Expect = 5.0
Identities = 21/68 (30%), Positives = 22/68 (32%), Gaps = 8/68 (11%)
Frame = +3
Query: 405 PPXXXXKXGGXPPRGGXXPPPPXXFF*K----NHPPPXXXG----GGGXXPPXXXCXXGG 560
PP + G P G PPPP F PPP G GG PP G
Sbjct: 310 PPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAG 369
Query: 561 XAXXXXPP 584
PP
Sbjct: 370 PGMYPPPP 377
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.7 bits (61), Expect = 5.0
Identities = 23/76 (30%), Positives = 27/76 (35%)
Frame = -1
Query: 408 GGPPXXGXGEXXXXXGXXXXPRGEKKXFXWXPPXYKKXXPPXXPPGXPGXPQKXXXFXKK 229
GGPP G G RG PP + PP G PG P +
Sbjct: 1466 GGPPPP-RGMNSPMRGMPPPMRGGGPPMRGGPPM--RGGPPMFRGGPPG-PGRGMPSPMM 1521
Query: 228 RGAXXKTXFGVRGGXP 181
RG+ + F RGG P
Sbjct: 1522 RGSSMRGGFPQRGGGP 1537
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 28.7 bits (61), Expect = 5.0
Identities = 22/75 (29%), Positives = 23/75 (30%), Gaps = 7/75 (9%)
Frame = +3
Query: 381 PQXPXXGXPPXXXXKXGGXPPRGGXXPPPPXXF----F*KNHPPPXXXGGG---GXXPPX 539
P PP PP G PPPP F N PPP G G PP
Sbjct: 700 PMFNLNAPPPPGIPGYPPAPPPPGVGPPPPQGIPPMGFDPNKPPPPMFQQGFNAGAPPPP 759
Query: 540 XXCXXGGXAXXXXPP 584
G + PP
Sbjct: 760 FGRGAGPMSSFPPPP 774
Score = 28.7 bits (61), Expect = 5.0
Identities = 22/65 (33%), Positives = 23/65 (35%), Gaps = 4/65 (6%)
Frame = +3
Query: 378 FPQXPXXGXPPXXXXKXGGXPPRGGXXPPPPXXFF*KNHPPPXXXGG----GGXXPPXXX 545
F Q G PP + G P PPPP PPP GG GG PP
Sbjct: 747 FQQGFNAGAPPPPFGRGAG--PMSSF-PPPPRGGMHHMPPPPSFRGGRGGHGGPPPPHFD 803
Query: 546 CXXGG 560
GG
Sbjct: 804 RRGGG 808
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 27.9 bits (59), Expect = 8.8
Identities = 18/49 (36%), Positives = 18/49 (36%)
Frame = -3
Query: 535 GGXXPPPPXXXGGGWFF*KXXXGGGGXXPPRGGXPPXFXXXXGGXPXXG 389
GG PPP GGG GGGG GG P GG G
Sbjct: 45 GGGCAPPPAPCGGG------CGGGGGGCGGGGGCAPPPAPCGGGCGGGG 87
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 27.9 bits (59), Expect = 8.8
Identities = 18/49 (36%), Positives = 18/49 (36%)
Frame = -3
Query: 535 GGXXPPPPXXXGGGWFF*KXXXGGGGXXPPRGGXPPXFXXXXGGXPXXG 389
GG PPP GGG GGGG GG P GG G
Sbjct: 45 GGGCAPPPAPCGGG------CGGGGGGCGGGGGCAPPPAPCGGGCGGGG 87
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = +1
Query: 136 PXPPEXKXXPQKVXXGXPPPDSKXXFXPGPP 228
P PP P ++ G PPP P PP
Sbjct: 773 PPPPSAIPLPPRLQGGIPPPPPLGIIPPPPP 803
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 27.9 bits (59), Expect = 8.8
Identities = 18/54 (33%), Positives = 18/54 (33%), Gaps = 2/54 (3%)
Frame = +3
Query: 429 GGXPPRGGXXPPPPXXFF*KNHPPPXXXGGGG--XXPPXXXCXXGGXAXXXXPP 584
GG PP G P F PP GGGG PP G PP
Sbjct: 131 GGPPPFGQPFQQAPQGMFNVPTGPPPLMGGGGDPRGPPGGMGGPPGHGGMGGPP 184
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 27.9 bits (59), Expect = 8.8
Identities = 18/54 (33%), Positives = 18/54 (33%), Gaps = 2/54 (3%)
Frame = +3
Query: 429 GGXPPRGGXXPPPPXXFF*KNHPPPXXXGGGG--XXPPXXXCXXGGXAXXXXPP 584
GG PP G P F PP GGGG PP G PP
Sbjct: 411 GGPPPFGQPFQQAPQGMFNVPTGPPPLMGGGGDPRGPPGGMGGPPGHGGMGGPP 464
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = +1
Query: 136 PXPPEXKXXPQKVXXGXPPPDSKXXFXPGPP 228
P PP P ++ G PPP P PP
Sbjct: 773 PPPPSAIPLPPRLQGGIPPPPPLGIIPPPPP 803
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,360,780
Number of Sequences: 27780
Number of extensions: 297338
Number of successful extensions: 1372
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 501
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1112
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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