Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_FL5_P10
(828 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016672-7|AAB66119.1| 378|Caenorhabditis elegans Vig (drosophi... 62 6e-10
Z68314-7|CAA92662.2| 872|Caenorhabditis elegans Hypothetical pr... 31 1.0
L16679-1|AAA28092.5| 2104|Caenorhabditis elegans Muscle position... 30 2.3
AL132862-2|CAB70224.1| 1019|Caenorhabditis elegans Hypothetical ... 30 2.3
AF289202-1|AAK69172.1| 2104|Caenorhabditis elegans transmembrane... 30 2.3
U64844-8|AAB18308.1| 330|Caenorhabditis elegans Serpentine rece... 29 4.1
AF003139-10|AAB54160.3| 294|Caenorhabditis elegans Hypothetical... 28 7.1
Z75711-6|CAB00037.3| 387|Caenorhabditis elegans Hypothetical pr... 28 9.4
U41104-6|AAK77633.2| 419|Caenorhabditis elegans Hypothetical pr... 28 9.4
>AF016672-7|AAB66119.1| 378|Caenorhabditis elegans Vig (drosophila
vasa intronic gene)ortholog protein 1, isoform a
protein.
Length = 378
Score = 61.7 bits (143), Expect = 6e-10
Identities = 39/104 (37%), Positives = 53/104 (50%)
Frame = +2
Query: 302 REFDRRSGSDKTGVKSVDKREGAGPHNWGTIKDDLDELNKXXXXXXXXXXKAPEAGAGDG 481
R+FDR+SGSD+TGV+S DK++G G NWG KD+L + + PE +
Sbjct: 178 RQFDRQSGSDRTGVRSFDKKDGHGKGNWGDQKDELAGETENIAPEGAESTE-PEV-PREK 235
Query: 482 QXXXXXXXXXXXXXXXXLTLDEYKALRNAQRTAPQYNLRKAGEG 613
TL E+KA A+ AP++N RKAGEG
Sbjct: 236 TAEELAYEAELAVLAKQKTLKEFKAA--AKADAPKFNTRKAGEG 277
>Z68314-7|CAA92662.2| 872|Caenorhabditis elegans Hypothetical
protein F07H5.8 protein.
Length = 872
Score = 31.1 bits (67), Expect = 1.0
Identities = 25/120 (20%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Frame = -2
Query: 656 CVPTEPGFSTGSSLHPHLPSSNCTAERCVARCVKPCIHR-VSTHAVLPQRALHVQFQALV 480
CV +P FS ++ PS++ ++ +C+ +C C + + T+ + Q+ Q Q
Sbjct: 494 CVAAQPNFSVQINMIDETPSTSTSSPQCIPQCQPSCDQQCIQTYKIQVQQMNSQQKQQRQ 553
Query: 479 HRQRRPQEPSLQ*FHPQNRFCSTRRDRP*SCPSCGDLRPPSCRLISHRFCQSRIFGRTHV 300
+ +P+ + Q+++ T + + S + G+ P +C+ C +I +T V
Sbjct: 554 YNCVPACQPTCEQSCIQSQYQVTIQ-QSYSKGNQGNSCPSACQPACEPLCVQQITVQTTV 612
>L16679-1|AAA28092.5| 2104|Caenorhabditis elegans Muscle positioning
protein 4 protein.
Length = 2104
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -2
Query: 617 LHPHLPSSNCTAERCVARCVKPCIHRVSTHA 525
L+P P NC + R V C KP ++ S HA
Sbjct: 1655 LNPSRPGRNCLSYRGVNECEKPELNECSPHA 1685
>AL132862-2|CAB70224.1| 1019|Caenorhabditis elegans Hypothetical
protein Y73F8A.5 protein.
Length = 1019
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 78 RVVVKTGRRTVPQKTRKELRGHRDASSA 161
RV+ GRR+ P +R LR HR+ +A
Sbjct: 983 RVIFSKGRRSAPNNSRTTLRDHRENDNA 1010
>AF289202-1|AAK69172.1| 2104|Caenorhabditis elegans transmembrane
matrix receptor MUP-4 protein.
Length = 2104
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -2
Query: 617 LHPHLPSSNCTAERCVARCVKPCIHRVSTHA 525
L+P P NC + R V C KP ++ S HA
Sbjct: 1655 LNPSRPGRNCLSYRGVNECEKPELNECSPHA 1685
>U64844-8|AAB18308.1| 330|Caenorhabditis elegans Serpentine
receptor, class h protein213 protein.
Length = 330
Score = 29.1 bits (62), Expect = 4.1
Identities = 22/72 (30%), Positives = 34/72 (47%)
Frame = -3
Query: 730 TRCG*SAQIXFLVSFLIITTVTFLLAFQQNQVFPLAQVFTLTCLPQIVLRSGALRVA*SL 551
++C + + ++ I+ TV F A+Q LA+ F ++ P I L A L
Sbjct: 130 SKCWRVFRTPWFITHFIVATVFFFPAYQMIPDQQLAKNFVISIAPCIPLYVNA-----DL 184
Query: 550 VFIECQLTRFFL 515
VF+ TRFFL
Sbjct: 185 VFVMLLETRFFL 196
>AF003139-10|AAB54160.3| 294|Caenorhabditis elegans Hypothetical
protein F53G12.4 protein.
Length = 294
Score = 28.3 bits (60), Expect = 7.1
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = -1
Query: 390 VPQLWGPAPSLLSTDFTPVLSEP-DLRSNSRLPLLS 286
+P WGP+ S L TD S+P N+ LP LS
Sbjct: 168 IPNAWGPSKSALVTDDVASTSDPLPAIFNAHLPPLS 203
>Z75711-6|CAB00037.3| 387|Caenorhabditis elegans Hypothetical
protein K02B12.8 protein.
Length = 387
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 3/40 (7%)
Frame = -2
Query: 389 CPSCGDLRPPSCRLIS---HRFCQSRIFGRTHVCLYCQKN 279
C C + +PP IS H FC VCL C+KN
Sbjct: 6 CNKCFNRKPPDGFFISSCFHIFCTKCAKADLAVCLICKKN 45
>U41104-6|AAK77633.2| 419|Caenorhabditis elegans Hypothetical
protein T12C9.7 protein.
Length = 419
Score = 27.9 bits (59), Expect = 9.4
Identities = 10/48 (20%), Positives = 23/48 (47%)
Frame = -2
Query: 431 QNRFCSTRRDRP*SCPSCGDLRPPSCRLISHRFCQSRIFGRTHVCLYC 288
+ + C+ +R P P+C +L+P ++ + G +++ YC
Sbjct: 49 EKKQCTKKRQLPSLAPACEELQPKKSKVTEETVASQKTHGLSNLDDYC 96
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,991,644
Number of Sequences: 27780
Number of extensions: 263909
Number of successful extensions: 809
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 779
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 809
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2050970610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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