Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_FL5_P06
(821 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 67 2e-13
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 65 6e-13
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 63 3e-12
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 62 6e-12
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 61 1e-11
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 60 2e-11
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 60 3e-11
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 60 3e-11
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 60 3e-11
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 60 3e-11
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 59 4e-11
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 58 7e-11
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 58 1e-10
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 58 1e-10
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 58 1e-10
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 57 2e-10
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 57 2e-10
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 57 2e-10
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 56 4e-10
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 55 7e-10
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 54 1e-09
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 54 1e-09
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 52 5e-09
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 47 2e-07
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 46 4e-07
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 41 1e-05
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 39 5e-05
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 39 5e-05
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 39 5e-05
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 38 1e-04
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 37 3e-04
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 36 3e-04
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 33 0.004
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 31 0.017
DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein. 25 0.85
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 4.5
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 22 7.9
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 66.9 bits (156), Expect = 2e-13
Identities = 50/159 (31%), Positives = 71/159 (44%), Gaps = 9/159 (5%)
Frame = +2
Query: 68 IASAAECENATSLSLMIDSLLATYDRDSPPDSK----IVVNLTLHLRHA---NIRESEST 226
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 227 VRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RAR 400
+ L+ W D + W+ E+G T L V SE +W PD+VL N A G + +A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 401 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 517
+ G V W + + + +P D QTC KFGS
Sbjct: 127 LHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGS 165
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 65.3 bits (152), Expect = 6e-13
Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 7/149 (4%)
Frame = +2
Query: 92 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNW 259
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 260 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSWI 430
+D+RL++ G+ + + R+W+PD N + T R+ +G V +
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYS 121
Query: 431 KRLDISTPISMQLDNWPNDMQTCTFKFGS 517
RL I M L+N+P D Q C +FGS
Sbjct: 122 SRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 63.3 bits (147), Expect = 3e-12
Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 9/164 (5%)
Frame = +2
Query: 86 CENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQAD 244
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 245 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 418
++ +W D +L W+ E+G L V S+ +WRPD+VL N A A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 419 VSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHXSDEMXFR 550
V W + + ++ +P D QTC KFGS + ++ R
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVDLR 180
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 62.1 bits (144), Expect = 6e-12
Identities = 36/132 (27%), Positives = 65/132 (49%), Gaps = 6/132 (4%)
Frame = +2
Query: 164 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWR 337
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 338 PDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTF 505
PD+VL N A G+Y +R + + NG V W+ + ++ + +P D QTC
Sbjct: 111 PDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 506 KFGSRMHXSDEM 541
KFGS D++
Sbjct: 168 KFGSWTFNGDQV 179
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 60.9 bits (141), Expect = 1e-11
Identities = 45/166 (27%), Positives = 75/166 (45%), Gaps = 12/166 (7%)
Frame = +2
Query: 56 LTCAIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRH---ANIRE 214
++C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 5 ISCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKN 64
Query: 215 SESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYAL 391
T + ++ W D +L WN ++G T V SE +W PD+VL N A G+Y +
Sbjct: 65 QIMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEV 119
Query: 392 ----RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 517
+A + + G V W + + ++ +P D QTC KFGS
Sbjct: 120 TIMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGS 165
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 60.5 bits (140), Expect = 2e-11
Identities = 39/142 (27%), Positives = 69/142 (48%), Gaps = 7/142 (4%)
Frame = +2
Query: 113 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 277
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 278 WNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDIST 451
W E+G L V S+ +WRPD+VL N A A +A + + G V W +
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKS 151
Query: 452 PISMQLDNWPNDMQTCTFKFGS 517
+ ++ +P D QTC KFGS
Sbjct: 152 SCEIDVEYFPFDEQTCVLKFGS 173
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 59.7 bits (138), Expect = 3e-11
Identities = 43/162 (26%), Positives = 76/162 (46%), Gaps = 10/162 (6%)
Frame = +2
Query: 86 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANIRESESTVRIQADLQ 250
C++ TS S + L YDRD P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 251 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL--LNAAATTAGDYALRARVSNNGSV 421
+ W L+W + E+ ++ V S +W PD+V+ + + ++ V N+G++
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVMHSVTSVGIDLEMPSVECIVFNSGTI 147
Query: 422 SWIKRLDISTPISMQLDN--WPNDMQTCTFKFGSRMHXSDEM 541
+ TP+ + D+ WP D+ CT S H S+E+
Sbjct: 148 LCVP-FTTYTPV-CEYDHTWWPYDILNCTIHIASWSHGSNEI 187
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 59.7 bits (138), Expect = 3e-11
Identities = 30/115 (26%), Positives = 57/115 (49%), Gaps = 2/115 (1%)
Frame = +2
Query: 203 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 376
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 377 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHXSDEM 541
G Y V++NGS ++ + + + +P D Q C KFGS + +++
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQV 207
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 59.7 bits (138), Expect = 3e-11
Identities = 30/115 (26%), Positives = 57/115 (49%), Gaps = 2/115 (1%)
Frame = +2
Query: 203 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 376
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 377 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHXSDEM 541
G Y V++NGS ++ + + + +P D Q C KFGS + +++
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQV 207
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 59.7 bits (138), Expect = 3e-11
Identities = 44/147 (29%), Positives = 67/147 (45%), Gaps = 12/147 (8%)
Frame = +2
Query: 113 MIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQADLQMNWIDKR 271
+ D LL+ Y+R P LT+ L N++ T + ++ W D +
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVW--VEQRWNDYK 94
Query: 272 LSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKR 436
L WN E+G L V SE +W PD+VL N A G+Y + +A + G VSW
Sbjct: 95 LKWNPEEYGGVEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKYTGDVSWKPP 151
Query: 437 LDISTPISMQLDNWPNDMQTCTFKFGS 517
+ + ++ +P D Q+C KFGS
Sbjct: 152 AIYKSSCEINVEYFPFDEQSCIMKFGS 178
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 59.3 bits (137), Expect = 4e-11
Identities = 30/115 (26%), Positives = 57/115 (49%), Gaps = 2/115 (1%)
Frame = +2
Query: 203 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 376
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 377 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHXSDEM 541
G Y V++NGS ++ + + + +P D Q C KFGS + +++
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQV 139
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 58.4 bits (135), Expect = 7e-11
Identities = 30/115 (26%), Positives = 57/115 (49%), Gaps = 2/115 (1%)
Frame = +2
Query: 203 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 376
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 377 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHXSDEM 541
G Y V+++GS ++ + M + +P D Q C KFGS + +++
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGSWTYDGNQV 139
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 58.0 bits (134), Expect = 1e-10
Identities = 30/115 (26%), Positives = 57/115 (49%), Gaps = 2/115 (1%)
Frame = +2
Query: 203 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 376
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 377 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHXSDEM 541
G Y V+++GS ++ + M + +P D Q C KFGS + +++
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGSWTYDGNQV 139
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 58.0 bits (134), Expect = 1e-10
Identities = 40/159 (25%), Positives = 72/159 (45%), Gaps = 8/159 (5%)
Frame = +2
Query: 89 ENATSLSLMIDSLLATYDRDSPPDS--KIVVNLTLHL--RHANIRESESTVRIQADLQMN 256
++ T+L + L YD + P S +I N+T+ L + + S + + + + +
Sbjct: 39 DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98
Query: 257 WIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVS 424
W D LSW ++ G + V S+ +W PD+ + N+ T G V ++GSVS
Sbjct: 99 WTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVS 158
Query: 425 WIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHXSDEM 541
+ + + +WP D C FGS +H +E+
Sbjct: 159 CVPSVKHVAKCATDFSSWPYDTHRCRINFGSWVHSGEEV 197
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 58.0 bits (134), Expect = 1e-10
Identities = 41/145 (28%), Positives = 73/145 (50%), Gaps = 10/145 (6%)
Frame = +2
Query: 113 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 277
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 278 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLD 442
W E+G L V S+ +WRPD+VL N A G+Y + +A V +G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNAD---GNYEVTLMTKATVYYSGLVVWQPPAV 148
Query: 443 ISTPISMQLDNWPNDMQTCTFKFGS 517
+ S+ ++ +P D+QTC K GS
Sbjct: 149 YKSSCSIDVEFFPYDVQTCVLKLGS 173
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 57.2 bits (132), Expect = 2e-10
Identities = 29/115 (25%), Positives = 57/115 (49%), Gaps = 2/115 (1%)
Frame = +2
Query: 203 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 376
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 377 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHXSDEM 541
G Y V+++GS ++ + + + +P D Q C KFGS + +++
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQV 139
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 56.8 bits (131), Expect = 2e-10
Identities = 29/115 (25%), Positives = 57/115 (49%), Gaps = 2/115 (1%)
Frame = +2
Query: 203 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 376
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 377 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHXSDEM 541
G Y V+++GS ++ + + + +P D Q C KFGS + +++
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQV 139
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 56.8 bits (131), Expect = 2e-10
Identities = 29/115 (25%), Positives = 57/115 (49%), Gaps = 2/115 (1%)
Frame = +2
Query: 203 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 376
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 377 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHXSDEM 541
G Y V+++GS ++ + + + +P D Q C KFGS + +++
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQV 139
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 56.0 bits (129), Expect = 4e-10
Identities = 40/158 (25%), Positives = 71/158 (44%), Gaps = 7/158 (4%)
Frame = +2
Query: 65 AIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTV 229
A+A++ + +++ LL TY+ P +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 230 RIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARV 403
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVV 130
Query: 404 SNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 517
NNG+ ++ + + + +P D Q C KFGS
Sbjct: 131 KNNGTCLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGS 168
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 55.2 bits (127), Expect = 7e-10
Identities = 45/183 (24%), Positives = 80/183 (43%), Gaps = 12/183 (6%)
Frame = +2
Query: 35 IILLPFLLTCAIASAAECENATSLSLMIDSLLATYDRDSPP------DSKIVVNLTLHLR 196
++LL FLL + + + ++D++L YD P D +V + L +R
Sbjct: 9 LVLLTFLLHPSRCTQGKVNYREKEKEVLDNILGGYDARIRPSGENATDGPAIVRVNLFVR 68
Query: 197 H-ANIRESESTVRIQADLQMNWIDKRLSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAA 367
A I + + +Q + W+D+RL +N G T L + R+W PD+ N
Sbjct: 69 SIATISDIKMEYSVQLTFREQWLDERLRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKE 127
Query: 368 TTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHXSDE 538
+ + R+ NGSV + R+ ++ M L +P D Q C+ + S +D+
Sbjct: 128 GHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDD 187
Query: 539 MXF 547
+ F
Sbjct: 188 LVF 190
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 54.4 bits (125), Expect = 1e-09
Identities = 36/147 (24%), Positives = 66/147 (44%), Gaps = 8/147 (5%)
Frame = +2
Query: 101 SLSLMIDSLLATYDRDSPPD----SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNWID 265
++++++++LL Y+ + P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 266 KRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 436
RLS+ S + ER+WRPD N + + R+S +G + + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 437 LDISTPISMQLDNWPNDMQTCTFKFGS 517
L I M+L N+P D Q+C GS
Sbjct: 156 LTIKAKCPMELRNFPMDRQSCPLILGS 182
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 54.4 bits (125), Expect = 1e-09
Identities = 33/120 (27%), Positives = 51/120 (42%), Gaps = 3/120 (2%)
Frame = +2
Query: 167 IVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 343
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 344 VVLLNAAATTAGDYALRARV--SNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 517
+L N A + V S+ G V W+ + + ++ +P D Q C K+ S
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWAS 151
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 52.4 bits (120), Expect = 5e-09
Identities = 44/183 (24%), Positives = 79/183 (43%), Gaps = 12/183 (6%)
Frame = +2
Query: 35 IILLPFLLTCAIASAAECENATSLSLMIDSLLATYDRDSPP------DSKIVVNLTLHLR 196
++LL FLL + + + ++D++L YD P D VV + + +R
Sbjct: 9 LVLLTFLLHPSRCTQGKVNYREKEKEVLDNILGGYDARIRPSGENATDGPAVVRVNIFVR 68
Query: 197 H-ANIRESESTVRIQADLQMNWIDKRLSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAA 367
+ I + +Q + W+D+RL +N G T L + R+W PD+ N
Sbjct: 69 SISKIDDVTMEYSVQLTFREQWLDERLRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKE 127
Query: 368 TTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHXSDE 538
+ + R+ NGSV + R+ ++ M L +P D Q C+ + S +D+
Sbjct: 128 GHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDD 187
Query: 539 MXF 547
+ F
Sbjct: 188 LVF 190
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 47.2 bits (107), Expect = 2e-07
Identities = 40/155 (25%), Positives = 72/155 (46%), Gaps = 13/155 (8%)
Frame = +2
Query: 92 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLH-LRHANIRESESTVRIQADLQMNW 259
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 260 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 412
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 413 GSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 517
GS++ RL I+ M L +P D Q C + S
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 46.0 bits (104), Expect = 4e-07
Identities = 40/155 (25%), Positives = 71/155 (45%), Gaps = 13/155 (8%)
Frame = +2
Query: 92 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLH-LRHANIRESESTVRIQADLQMNW 259
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 260 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 412
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 413 GSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 517
GS++ RL I+ M L +P D Q C + S
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 41.1 bits (92), Expect = 1e-05
Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 3/107 (2%)
Frame = +2
Query: 206 IRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDY 385
I E I L W D+RL+++ E + +E++W PD N + D
Sbjct: 75 ISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 134
Query: 386 ALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 517
R R+S +GSV++ R + M L +P D Q CT + S
Sbjct: 135 TERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIES 181
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 39.1 bits (87), Expect = 5e-05
Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 10/173 (5%)
Frame = +2
Query: 29 TYIILLPFLLTCAIASAAE--CENATSLSLMIDSLLAT--YDRD--SPPDSKIVVNLT-L 187
T + +L LT AE E+ S ++D+LL + YD+ P + VN++ L
Sbjct: 34 TILCILTLALTLVTLVRAEDIFEDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVL 93
Query: 188 HLRHANIRESESTVRIQADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLN 358
L A+ ES ++ LQ W D RL + N ++ + + +W PD ++
Sbjct: 94 LLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHG 153
Query: 359 AAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 517
R+ NG+V+++ R + +L+ +P D C+F S
Sbjct: 154 DFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 39.1 bits (87), Expect = 5e-05
Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 10/173 (5%)
Frame = +2
Query: 29 TYIILLPFLLTCAIASAAE--CENATSLSLMIDSLLAT--YDRD--SPPDSKIVVNLT-L 187
T + +L LT AE E+ S ++D+LL + YD+ P + VN++ L
Sbjct: 34 TILCILTLALTLVTLVRAEDIFEDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVL 93
Query: 188 HLRHANIRESESTVRIQADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLN 358
L A+ ES ++ LQ W D RL + N ++ + + +W PD ++
Sbjct: 94 LLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHG 153
Query: 359 AAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 517
R+ NG+V+++ R + +L+ +P D C+F S
Sbjct: 154 DFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 39.1 bits (87), Expect = 5e-05
Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 10/173 (5%)
Frame = +2
Query: 29 TYIILLPFLLTCAIASAAE--CENATSLSLMIDSLLAT--YDRD--SPPDSKIVVNLT-L 187
T + +L LT AE E+ S ++D+LL + YD+ P + VN++ L
Sbjct: 34 TILCILTLALTLVTLVRAEDIFEDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVL 93
Query: 188 HLRHANIRESESTVRIQADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLN 358
L A+ ES ++ LQ W D RL + N ++ + + +W PD ++
Sbjct: 94 LLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHG 153
Query: 359 AAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 517
R+ NG+V+++ R + +L+ +P D C+F S
Sbjct: 154 DFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 37.5 bits (83), Expect = 1e-04
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Frame = +2
Query: 257 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 409
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 410 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 517
+GS++ RL I+ M L +P D Q C + S
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 97
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 36.7 bits (81), Expect = 3e-04
Identities = 26/120 (21%), Positives = 52/120 (43%), Gaps = 5/120 (4%)
Frame = +2
Query: 203 NIRESESTVRIQADLQMNWIDKRLSW--NAGEWGCSTWLVSSERLWRPDVVLLNAAATTA 376
+I E T L +W D RL N E + +WRPD NA T
Sbjct: 43 SINEESMTYVADIFLAQSWRDSRLRLPENMSEDYRILDVDWLHNIWRPDCFFKNAKKVTF 102
Query: 377 GDYALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHXSDEMXF 547
+ ++ + ++ ++ ++ +L + +M+ +++P+D Q C+ S H + ++ F
Sbjct: 103 HEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQDLVF 162
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 36.3 bits (80), Expect = 3e-04
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Frame = +2
Query: 323 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 493
+ +WRPD NA + T + + + ++ ++ +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 494 TCTFKFGSRMHXSDEMXFR 550
C + S H +DEM F+
Sbjct: 176 ECKLQMESLSHTTDEMIFQ 194
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 32.7 bits (71), Expect = 0.004
Identities = 28/121 (23%), Positives = 52/121 (42%), Gaps = 4/121 (3%)
Frame = +2
Query: 167 IVVNLT-LHLRHANIRESESTVRIQADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRP 340
+ VN++ L L A+ ES ++ LQ W D RL + N ++ + + +W P
Sbjct: 137 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 196
Query: 341 DV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFG 514
D ++ R+ NG+V+++ R + +L+ +P D C+F
Sbjct: 197 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIE 256
Query: 515 S 517
S
Sbjct: 257 S 257
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 30.7 bits (66), Expect = 0.017
Identities = 29/139 (20%), Positives = 57/139 (41%), Gaps = 11/139 (7%)
Frame = +2
Query: 167 IVVNLTLHLRHAN-IRESESTVRIQADLQMNWIDKRLS-----WNAGEWGCSTWLVSSER 328
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 329 LWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISTPISMQLDNWPNDMQ 493
LW+PD LNA + AL + S+ N +V + R+ M+ +P D+Q
Sbjct: 71 LWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMDIQ 128
Query: 494 TCTFKFGSRMHXSDEMXFR 550
C S + ++ R
Sbjct: 129 ICPIYIESFSYHKQKLRLR 147
>DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein.
Length = 145
Score = 25.0 bits (52), Expect = 0.85
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 32 YIILLPFLLTCAIAS-AAECENATSLSLMIDSLLAT 136
Y ILL L+TC I S + C T S + D ++AT
Sbjct: 3 YSILLSLLITCLICSPSVHC--GTRPSFVSDEMIAT 36
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.6 bits (46), Expect = 4.5
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2
Query: 310 PSAAAPLPCVPTQS 269
PSA AP+P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 21.8 bits (44), Expect = 7.9
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = +3
Query: 648 WXPPPWXPXP 677
W PPP+ P P
Sbjct: 1164 WNPPPFMPSP 1173
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,369
Number of Sequences: 438
Number of extensions: 4769
Number of successful extensions: 89
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26217432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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