Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_FL5_P03
(815 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 117 2e-26
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 107 1e-23
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 107 1e-23
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 98 1e-20
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 98 1e-20
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 94 2e-19
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 94 2e-19
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 93 5e-19
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 93 5e-19
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 71 2e-12
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 71 2e-12
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 71 2e-12
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 71 3e-12
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 60 5e-09
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 55 1e-07
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 55 1e-07
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 55 1e-07
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 55 1e-07
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 55 1e-07
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 47 4e-05
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 35 0.12
AE014296-3472|AAS65085.1| 558|Drosophila melanogaster CG33486-P... 32 1.1
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 29 7.6
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown protein.
Length = 908
Score = 117 bits (282), Expect = 2e-26
Identities = 56/154 (36%), Positives = 84/154 (54%)
Frame = +1
Query: 169 RRNLTPPITLFXQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRS 348
+R PP+ + +P KYLGV LD +TF H+ +R R + + Y ++ RS
Sbjct: 725 KRRTPPPVYIEEVPVPQPNAAKYLGVLLDRRLTFSKHVTDIRTRLRAKVAKHYWLLSSRS 784
Query: 349 RMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDL 528
++SL NK+T+YK + P Y ++ A +HI +Q++Q++ RL G WFVRN L
Sbjct: 785 KLSLSNKLTIYKQILAPNWKYGCQIWGLACDSHIKRIQAIQNKVARLITGCEWFVRNTTL 844
Query: 529 HDDLGLESIQKYMKSASERYFDKAMRHDNRLIVA 630
H DL L ++ + S RY D+ RH NRL A
Sbjct: 845 HRDLKLATVFDEINKHSSRYHDRLERHRNRLASA 878
Score = 31.1 bits (67), Expect = 1.9
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +3
Query: 12 SRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLF 128
SR + A +Q A +W R+W I IN +KS V F
Sbjct: 684 SRCEHDAADGIQDFAYRFSEWARRWNIGINSSKSNNVCF 722
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 107 bits (258), Expect = 1e-23
Identities = 53/146 (36%), Positives = 85/146 (58%)
Frame = +1
Query: 184 PPITLFXQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSRMSLR 363
PP+ L IP A +V YLGV LD +T+R HI++ L+ +I RS +SL
Sbjct: 721 PPLVLNNICIPQADEVTYLGVHLDRRLTWRKHIEAKSKHLKLKARNLHWLINARSPLSLE 780
Query: 364 NKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLG 543
K LY + ++P+ TY S ++ +A+R++ID +Q QSR R+ GAPW++RN ++H DL
Sbjct: 781 FKALLYNSVLKPIWTYGSELWGNASRSNIDIIQRAQSRILRIITGAPWYLRNENIHRDLK 840
Query: 544 LESIQKYMKSASERYFDKAMRHDNRL 621
++ + + + +Y +K H N L
Sbjct: 841 IKLVIEVIAEKKTKYNEKLTTHTNPL 866
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p protein.
Length = 888
Score = 107 bits (258), Expect = 1e-23
Identities = 53/146 (36%), Positives = 85/146 (58%)
Frame = +1
Query: 184 PPITLFXQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSRMSLR 363
PP+ L IP A +V YLGV LD +T+R HI++ L+ +I RS +SL
Sbjct: 721 PPLVLNNICIPQADEVTYLGVHLDRRLTWRKHIEAKSKHLKLKARNLHWLINARSPLSLE 780
Query: 364 NKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLG 543
K LY + ++P+ TY S ++ +A+R++ID +Q QSR R+ GAPW++RN ++H DL
Sbjct: 781 FKALLYNSVLKPIWTYGSELWGNASRSNIDIIQRAQSRILRIITGAPWYLRNENIHRDLK 840
Query: 544 LESIQKYMKSASERYFDKAMRHDNRL 621
++ + + + +Y +K H N L
Sbjct: 841 IKLVIEVIAEKKTKYNEKLTTHTNPL 866
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding protein,
3' end. ).
Length = 858
Score = 98.3 bits (234), Expect = 1e-20
Identities = 47/135 (34%), Positives = 80/135 (59%)
Frame = +1
Query: 184 PPITLFXQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSRMSLR 363
PP+ L +P A +V YLGV LD +T+R HI++ + + L+ +I S +SL
Sbjct: 723 PPLLLNSIPLPKADEVTYLGVHLDRRLTWRRHIEAKKTQLKLKANNLHWLINSGSPLSLD 782
Query: 364 NKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLG 543
+KV LY + ++P+ TY S ++ +A+ ++ID +Q QS+ R GAPW+VR+ ++ DL
Sbjct: 783 HKVLLYNSILKPIWTYGSQLWGNASNSNIDIIQRAQSKILRTITGAPWYVRSENIQRDLN 842
Query: 544 LESIQKYMKSASERY 588
+ S+ + E+Y
Sbjct: 843 IPSVTNAITELKEKY 857
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 97.9 bits (233), Expect = 1e-20
Identities = 48/148 (32%), Positives = 83/148 (56%)
Frame = +1
Query: 178 LTPPITLFXQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSRMS 357
+T PI L + + KYLG+TLD +TF PH+K+ R + +L ++ ++S M+
Sbjct: 734 VTAPIELEGVILDQPSQAKYLGITLDKRLTFGPHLKATTRRCYQRMQQLRWLLNRKSTMT 793
Query: 358 LRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDD 537
LR K +Y C+ P+ Y ++ AA+++ + +Q LQ+R R P++VR LH D
Sbjct: 794 LRAKRAVYVHCVAPIWLYGIQIWGIAAKSNYNRIQVLQNRAMRAITDCPYYVRGTTLHRD 853
Query: 538 LGLESIQKYMKSASERYFDKAMRHDNRL 621
L L ++++ + + RY D+ RH + L
Sbjct: 854 LNLHTVEEQISRHTSRYSDRLRRHHSIL 881
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 94.3 bits (224), Expect = 2e-19
Identities = 45/151 (29%), Positives = 86/151 (56%)
Frame = +1
Query: 169 RRNLTPPITLFXQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRS 348
R P ++L + I + KYLG+TLD +TF HI +++ + R+ +I R+
Sbjct: 730 RTGSCPGVSLNGRLIRHHQAYKYLGITLDRKLTFSRHITNIQQAFRTKVARMSWLIAPRN 789
Query: 349 RMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDL 528
++SL KV +YK+ + P + Y V+ AA++H++ ++ LQ++ R GAPW++R D+
Sbjct: 790 KLSLGCKVNIYKSILAPCLFYGLQVYGIAAKSHLNKIRILQAKTLRRISGAPWYMRTRDI 849
Query: 529 HDDLGLESIQKYMKSASERYFDKAMRHDNRL 621
DL + + +++ +++Y ++ H N L
Sbjct: 850 ERDLKVPKLGDKLQNIAQKYMERLNVHPNSL 880
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 94.3 bits (224), Expect = 2e-19
Identities = 45/151 (29%), Positives = 86/151 (56%)
Frame = +1
Query: 169 RRNLTPPITLFXQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRS 348
R P ++L + I + KYLG+TLD +TF HI +++ + R+ +I R+
Sbjct: 532 RTGSCPGVSLNGRLIRHHQAYKYLGITLDRKLTFSRHITNIQQAFRTKVARMSWLIAPRN 591
Query: 349 RMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDL 528
++SL KV +YK+ + P + Y V+ AA++H++ ++ LQ++ R GAPW++R D+
Sbjct: 592 KLSLGCKVNIYKSILAPCLFYGLQVYGIAAKSHLNKIRILQAKTLRRISGAPWYMRTRDI 651
Query: 529 HDDLGLESIQKYMKSASERYFDKAMRHDNRL 621
DL + + +++ +++Y ++ H N L
Sbjct: 652 ERDLKVPKLGDKLQNIAQKYLERLNVHPNSL 682
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 92.7 bits (220), Expect = 5e-19
Identities = 38/124 (30%), Positives = 71/124 (57%)
Frame = +1
Query: 190 ITLFXQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSRMSLRNK 369
+ + I W ++YLG+ D +TF+ HI + + I+ LYP+I ++S++S+ NK
Sbjct: 757 LRILDSPIQWVDNIRYLGIIFDKKLTFKYHINNTIMKVNKIICTLYPLINRKSKLSISNK 816
Query: 370 VTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLE 549
+ ++KT P++ Y S V+ A+THI LQ Q++ +L + P++ LH G++
Sbjct: 817 IIIFKTIFNPILMYGSPVWGRCAQTHIKKLQICQNKLLKLIMNLPYYTNTKYLHIKAGVQ 876
Query: 550 SIQK 561
+Q+
Sbjct: 877 KVQQ 880
Score = 33.1 bits (72), Expect = 0.47
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +3
Query: 24 SLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLFQRGSSTR 149
S I + +QS L +++KW+I INP K+ A+ F + R
Sbjct: 709 SEINQSMQSYLNELDIYYKKWKIKINPNKTNAIFFTKRRKPR 750
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 92.7 bits (220), Expect = 5e-19
Identities = 38/124 (30%), Positives = 71/124 (57%)
Frame = +1
Query: 190 ITLFXQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSRMSLRNK 369
+ + I W ++YLG+ D +TF+ HI + + I+ LYP+I ++S++S+ NK
Sbjct: 705 LRILDSPIQWVDNIRYLGIIFDKKLTFKYHINNTIMKVNKIICTLYPLINRKSKLSISNK 764
Query: 370 VTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLE 549
+ ++KT P++ Y S V+ A+THI LQ Q++ +L + P++ LH G++
Sbjct: 765 IIIFKTIFNPILMYGSPVWGRCAQTHIKKLQICQNKLLKLIMNLPYYTNTKYLHIKAGVQ 824
Query: 550 SIQK 561
+Q+
Sbjct: 825 KVQQ 828
Score = 33.1 bits (72), Expect = 0.47
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +3
Query: 24 SLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLFQRGSSTR 149
S I + +QS L +++KW+I INP K+ A+ F + R
Sbjct: 657 SEINQSMQSYLNELDIYYKKWKIKINPNKTNAIFFTKRRKPR 698
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 70.9 bits (166), Expect = 2e-12
Identities = 41/160 (25%), Positives = 77/160 (48%), Gaps = 3/160 (1%)
Frame = +1
Query: 181 TPPITLFXQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSRMSL 360
TPP+ + Q K +YLG+ LD +TF H+ ++ + +L +I K S +
Sbjct: 793 TPPL-INGQRAAKLNKQRYLGLMLDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPK 851
Query: 361 RNKVTLYKTCIRPVMTYASVVFAH-AARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDD 537
K+ L+K + P+ YA ++ + T +Q++++++ R + A + R D+
Sbjct: 852 NAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASRYTRQADIRTK 911
Query: 538 LGLESIQKYMKSASERYFDKAMRHDNRLI--VAXADYSPN 651
++S + AS+RY + H+N LI + Y PN
Sbjct: 912 YNIKSFDEIFDKASQRYANSLTDHENPLIYDLLINAYKPN 951
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 70.9 bits (166), Expect = 2e-12
Identities = 41/160 (25%), Positives = 77/160 (48%), Gaps = 3/160 (1%)
Frame = +1
Query: 181 TPPITLFXQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSRMSL 360
TPP+ + Q K +YLG+ LD +TF H+ ++ + +L +I K S +
Sbjct: 793 TPPL-INGQRAAKLNKQRYLGLMLDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPK 851
Query: 361 RNKVTLYKTCIRPVMTYASVVFAH-AARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDD 537
K+ L+K + P+ YA ++ + T +Q++++++ R + A + R D+
Sbjct: 852 NAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASRYTRQADIRTK 911
Query: 538 LGLESIQKYMKSASERYFDKAMRHDNRLI--VAXADYSPN 651
++S + AS+RY + H+N LI + Y PN
Sbjct: 912 YNIKSFDEIFDKASQRYANSLTDHENPLIYDLLINAYKPN 951
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 70.9 bits (166), Expect = 2e-12
Identities = 41/160 (25%), Positives = 77/160 (48%), Gaps = 3/160 (1%)
Frame = +1
Query: 181 TPPITLFXQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSRMSL 360
TPP+ + Q K +YLG+ LD +TF H+ ++ + +L +I K S +
Sbjct: 793 TPPL-INGQRAAKLNKQRYLGLMLDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPK 851
Query: 361 RNKVTLYKTCIRPVMTYASVVFAH-AARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDD 537
K+ L+K + P+ YA ++ + T +Q++++++ R + A + R D+
Sbjct: 852 NAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASRYTRQADIRTK 911
Query: 538 LGLESIQKYMKSASERYFDKAMRHDNRLI--VAXADYSPN 651
++S + AS+RY + H+N LI + Y PN
Sbjct: 912 YNIKSFDEIFDKASQRYANSLTDHENPLIYDLLINAYKPN 951
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 70.5 bits (165), Expect = 3e-12
Identities = 41/160 (25%), Positives = 77/160 (48%), Gaps = 3/160 (1%)
Frame = +1
Query: 181 TPPITLFXQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSRMSL 360
TPP+ + Q K +YLG+ LD +TF H+ ++ + +L +I K S +
Sbjct: 346 TPPL-INGQRAAKLNKQRYLGLMLDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPK 404
Query: 361 RNKVTLYKTCIRPVMTYASVVFAH-AARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDD 537
K+ L+K + P+ YA ++ + T +Q++++++ R + A + R D+
Sbjct: 405 NAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASRYTRQADIRTK 464
Query: 538 LGLESIQKYMKSASERYFDKAMRHDNRLI--VAXADYSPN 651
++S + AS+RY + H+N LI + Y PN
Sbjct: 465 YNIKSFDETFDKASQRYANSLTDHENPLIYDLLINAYKPN 504
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 59.7 bits (138), Expect = 5e-09
Identities = 36/152 (23%), Positives = 72/152 (47%), Gaps = 3/152 (1%)
Frame = +1
Query: 205 QSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSRMSLRNKVTLYK 384
Q+I K YLGVTLD+ +T H+ + + + +L ++ RS++ + K+ + K
Sbjct: 801 QTIKKESKQSYLGVTLDSKLTLSSHVTKLLGKYSTAYRKLTWILNGRSKLPTKTKILILK 860
Query: 385 TCIRPVMTYASVVFAH-AARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIQK 561
+ + P+ YA + I +Q ++R R A + RN + D G++++++
Sbjct: 861 SVLSPIWQYAIAAWGPLVTDAQIRRVQVEENRKIRDICRAGRYTRNQTIRDLFGVKTVEE 920
Query: 562 YMKSASERYFDKAMRHDNRLI--VAXADYSPN 651
+ + A R+ + H N + + Y PN
Sbjct: 921 FYQQAMHRFSETIKSHPNIAVRRILSRHYIPN 952
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial cds.
).
Length = 964
Score = 54.8 bits (126), Expect = 1e-07
Identities = 34/152 (22%), Positives = 70/152 (46%), Gaps = 3/152 (1%)
Frame = +1
Query: 205 QSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSRMSLRNKVTLYK 384
Q+I K YLGV LD+ +T PH+ V + ++ ++ +RS++ K+ + K
Sbjct: 673 QAIKKESKQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILK 732
Query: 385 TCIRPVMTYASVVFAH-AARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIQK 561
+ + P+ YA + I +Q ++R R A + +N + D ++++++
Sbjct: 733 SVLSPIWQYAIAAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTKNQTIRDRYCVKTVEE 792
Query: 562 YMKSASERYFDKAMRHDNRLI--VAXADYSPN 651
+ + A R+ + H N + + Y PN
Sbjct: 793 FYQQAVHRFSETTKSHPNVAVRRIFSRHYIPN 824
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 54.8 bits (126), Expect = 1e-07
Identities = 34/152 (22%), Positives = 70/152 (46%), Gaps = 3/152 (1%)
Frame = +1
Query: 205 QSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSRMSLRNKVTLYK 384
Q+I K YLGV LD+ +T PH+ V + ++ ++ +RS++ K+ + K
Sbjct: 789 QAIKKESKQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILK 848
Query: 385 TCIRPVMTYASVVFAH-AARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIQK 561
+ + P+ YA + I +Q ++R R A + +N + D ++++++
Sbjct: 849 SVLSPIWQYAIAAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTKNQTIRDRYCVKTVEE 908
Query: 562 YMKSASERYFDKAMRHDNRLI--VAXADYSPN 651
+ + A R+ + H N + + Y PN
Sbjct: 909 FYQQAVHRFSETTKSHPNVAVRRIFSRHYIPN 940
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 54.8 bits (126), Expect = 1e-07
Identities = 34/152 (22%), Positives = 70/152 (46%), Gaps = 3/152 (1%)
Frame = +1
Query: 205 QSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSRMSLRNKVTLYK 384
Q+I K YLGV LD+ +T PH+ V + ++ ++ +RS++ K+ + K
Sbjct: 789 QAIKKESKQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILK 848
Query: 385 TCIRPVMTYASVVFAH-AARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIQK 561
+ + P+ YA + I +Q ++R R A + +N + D ++++++
Sbjct: 849 SVLSPIWQYAIAAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTKNQTIRDRYCVKTVEE 908
Query: 562 YMKSASERYFDKAMRHDNRLI--VAXADYSPN 651
+ + A R+ + H N + + Y PN
Sbjct: 909 FYQQAVHRFSETTKSHPNVAVRRIFSRHYIPN 940
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 54.8 bits (126), Expect = 1e-07
Identities = 34/152 (22%), Positives = 70/152 (46%), Gaps = 3/152 (1%)
Frame = +1
Query: 205 QSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSRMSLRNKVTLYK 384
Q+I K YLGV LD+ +T PH+ V + ++ ++ +RS++ K+ + K
Sbjct: 751 QAIKKESKQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILK 810
Query: 385 TCIRPVMTYASVVFAH-AARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIQK 561
+ + P+ YA + I +Q ++R R A + +N + D ++++++
Sbjct: 811 SVLSPIWQYAIAAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTKNQTIRDRYCVKTVEE 870
Query: 562 YMKSASERYFDKAMRHDNRLI--VAXADYSPN 651
+ + A R+ + H N + + Y PN
Sbjct: 871 FYQQAVHRFSETTKSHPNVAVRRIFSRHYIPN 902
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 54.8 bits (126), Expect = 1e-07
Identities = 34/152 (22%), Positives = 70/152 (46%), Gaps = 3/152 (1%)
Frame = +1
Query: 205 QSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSRMSLRNKVTLYK 384
Q+I K YLGV LD+ +T PH+ V + ++ ++ +RS++ K+ + K
Sbjct: 789 QAIKKESKQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILK 848
Query: 385 TCIRPVMTYASVVFAH-AARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIQK 561
+ + P+ YA + I +Q ++R R A + +N + D ++++++
Sbjct: 849 SVLSPIWQYAIAAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTKNQTIRDRYCVKTVEE 908
Query: 562 YMKSASERYFDKAMRHDNRLI--VAXADYSPN 651
+ + A R+ + H N + + Y PN
Sbjct: 909 FYQQAVHRFSETTKSHPNVAVRRIFSRHYIPN 940
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 46.8 bits (106), Expect = 4e-05
Identities = 23/85 (27%), Positives = 43/85 (50%)
Frame = +1
Query: 184 PPITLFXQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSRMSLR 363
P + +++P+ R +YLG+T+ M F HI S+R R ++G L ++ S R
Sbjct: 719 PTVRFAGRNLPYVRSCRYLGITVSEGMKFLTHIASLRQRMTGVVGALARVLRADWGFSPR 778
Query: 364 NKVTLYKTCIRPVMTYASVVFAHAA 438
+ T+Y + P + + + V+ A
Sbjct: 779 ARRTIYDGLMAPCVLFGAPVWYDTA 803
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 35.1 bits (77), Expect = 0.12
Identities = 24/112 (21%), Positives = 51/112 (45%)
Frame = +1
Query: 166 RRRNLTPPITLFXQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKR 345
R+R+ T I+ IP +K LG+TL+ + HI + + L + + +
Sbjct: 716 RKRHCTCKISCNNFQIPSVTSLKILGITLNNKYKWNTHINLLLPKLHNKLNIIKCLSSLK 775
Query: 346 SRMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGA 501
+ + + K I + Y ++ HA ++ ++ +++ + RLA+GA
Sbjct: 776 FNCNTHTLLNVAKATIIAKLEYGLFLYGHAPKSILNKIKTPFNSAIRLALGA 827
>AE014296-3472|AAS65085.1| 558|Drosophila melanogaster CG33486-PA
protein.
Length = 558
Score = 31.9 bits (69), Expect = 1.1
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 381 QNLHKARHDLRECGVRSRGPHTHRHP 458
Q LH ++H LRE R G H HR P
Sbjct: 18 QILHGSKHSLRELAYRQSGKHRHRGP 43
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 29.1 bits (62), Expect = 7.6
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +1
Query: 220 ARKVKYLGVTLDASMTFRPHIKSVRDRAAF---ILGRLYPMI 336
A +KYLGV +D ++F+ H + +AA L R+ P +
Sbjct: 714 AETLKYLGVLIDRRLSFKAHARYASKKAAMTAAALARIMPNV 755
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,119,152
Number of Sequences: 53049
Number of extensions: 810663
Number of successful extensions: 1807
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1802
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3839531124
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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