Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP09_FL5_P02
         (798 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein ( Dros...    79   5e-15
AE014298-3010|AAF50913.2| 4899|Drosophila melanogaster CG11734-P...    30   4.2  
BT006011-1|AAO74694.1| 1220|Drosophila melanogaster LD14884p pro...    29   9.7  
AE014134-2287|AAF53250.2|  868|Drosophila melanogaster CG16975-P...    29   9.7  
AE014134-2286|AAF53249.2| 1220|Drosophila melanogaster CG16975-P...    29   9.7  

>X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein (
            Drosophila melanogasterDNA for type II retrotransposable
            element  R2Dm.  ).
          Length = 1057

 Score = 79.4 bits (187), Expect = 5e-15
 Identities = 33/68 (48%), Positives = 47/68 (69%)
 Frame = +1

Query: 103  CRAGCKVRETTAHILQQCHRTHGGRILRHNKIVSFVAKAMEENKWTVELEPRLRTSVGLR 282
            CRAGC   ETT HI+Q+C+R+HG R+ RHN +V+ + + +EE    V +EP L+   GL 
Sbjct: 881  CRAGCDAPETTNHIMQKCYRSHGRRVARHNCVVNRIKRGLEERGCVVIVEPSLQCESGLN 940

Query: 283  KPDIIASR 306
            KPD++A R
Sbjct: 941  KPDLVALR 948



 Score = 39.9 bits (89), Expect = 0.004
 Identities = 25/78 (32%), Positives = 38/78 (48%)
 Frame = +2

Query: 356  SLDELHREKRNKYGNHGELVELVAGRLGLPKAECVRATSCTISWRGVWSLTSYKELRSII 535
            S+D+ H+ K N+Y       EL   R     A  +   S T++WRG+WS  S K L +  
Sbjct: 965  SMDDAHQRKINRYDRPDIRTEL---RRRFEAAGDIEFHSATLNWRGIWSGQSVKRLIAKG 1021

Query: 536  GLREPTLQIVPILALRGS 589
             L +    I+ +  +RGS
Sbjct: 1022 LLSKYDSHIISVQVMRGS 1039


>AE014298-3010|AAF50913.2| 4899|Drosophila melanogaster CG11734-PB
            protein.
          Length = 4899

 Score = 29.9 bits (64), Expect = 4.2
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +1

Query: 124  RETTAHILQQCHRTHGGRILRHNKIVSFVAKAMEENK 234
            ++ TA +  Q HRT    IL H+K+  ++ +A  E K
Sbjct: 1336 KDLTAEMSSQVHRTAMEHILEHHKLGKYMVQASTEEK 1372


>BT006011-1|AAO74694.1| 1220|Drosophila melanogaster LD14884p
           protein.
          Length = 1220

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = -3

Query: 694 DGPDLHPYRWTTVQGSTNAAPHD 626
           D P +HP  W T  G   AAP D
Sbjct: 733 DSPIIHPVGWATTVGHNLAAPQD 755


>AE014134-2287|AAF53250.2|  868|Drosophila melanogaster CG16975-PA,
           isoform A protein.
          Length = 868

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = -3

Query: 694 DGPDLHPYRWTTVQGSTNAAPHD 626
           D P +HP  W T  G   AAP D
Sbjct: 381 DSPIIHPVGWATTVGHNLAAPQD 403


>AE014134-2286|AAF53249.2| 1220|Drosophila melanogaster CG16975-PB,
           isoform B protein.
          Length = 1220

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = -3

Query: 694 DGPDLHPYRWTTVQGSTNAAPHD 626
           D P +HP  W T  G   AAP D
Sbjct: 733 DSPIIHPVGWATTVGHNLAAPQD 755


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,250,714
Number of Sequences: 53049
Number of extensions: 852952
Number of successful extensions: 2250
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2092
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2248
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3716337612
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)