Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP09_FL5_P02
         (798 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82257-1|CAB05120.2| 1043|Caenorhabditis elegans Hypothetical pr...    29   5.1  
AJ271057-1|CAB65957.1| 1043|Caenorhabditis elegans Ack related n...    29   5.1  
AF101318-2|AAK68599.1|  331|Caenorhabditis elegans Seven tm rece...    28   8.9  

>Z82257-1|CAB05120.2| 1043|Caenorhabditis elegans Hypothetical
           protein C01C7.1 protein.
          Length = 1043

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = -1

Query: 654 KXQPTPPPMTDVI*LNLVQFMCEPL-NASIGTICSVGSRSPIMD 526
           K  PTP   +D+     ++ +   L N SIGTIC      P++D
Sbjct: 714 KDIPTPASKSDIALCEKIEDLNRDLTNYSIGTICDYSEDRPLLD 757


>AJ271057-1|CAB65957.1| 1043|Caenorhabditis elegans Ack related
           non-receptor tyrosinekinase protein.
          Length = 1043

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = -1

Query: 654 KXQPTPPPMTDVI*LNLVQFMCEPL-NASIGTICSVGSRSPIMD 526
           K  PTP   +D+     ++ +   L N SIGTIC      P++D
Sbjct: 714 KDIPTPASKSDIALCEKIEDLNRDLTNYSIGTICDYSEDRPLLD 757


>AF101318-2|AAK68599.1|  331|Caenorhabditis elegans Seven tm
           receptor protein 66 protein.
          Length = 331

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = -2

Query: 572 VSERFVVSVPEARLWTLTPYKKSGSILPSKI 480
           V+E + ++V E   ++LTPY   GS++ + I
Sbjct: 166 VAENYGLNVSELARFSLTPYNSDGSVIHTSI 196


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,910,771
Number of Sequences: 27780
Number of extensions: 404565
Number of successful extensions: 1018
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 975
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1018
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)