Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP09_FL5_P02
         (798 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate isome...    23   2.5  
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    23   4.3  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    22   7.6  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           22   7.6  

>EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate
           isomerase protein.
          Length = 247

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
 Frame = +2

Query: 371 HREKRNKYGNHGELV-ELVAGRL--GLPKAECV 460
           H E+RN +G + EL+ E VA  L  GL    C+
Sbjct: 94  HSERRNIFGENDELIAEKVAHALESGLKVIACI 126


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -3

Query: 181 ESGRRVFCDTVVGCEPSSP*P 119
           E    +FC+T +GC+  +  P
Sbjct: 157 EVANEMFCETTIGCKDKNMAP 177


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +1

Query: 235 WTVELEPRLRTSVGLRK 285
           WT+E  PR++T +G  K
Sbjct: 17  WTLEDAPRVKTPLGAIK 33


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +1

Query: 235 WTVELEPRLRTSVGLRK 285
           WT+E  PR++T +G  K
Sbjct: 17  WTLEDAPRVKTPLGAIK 33


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 235,106
Number of Sequences: 438
Number of extensions: 5369
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25246416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)