Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_FL5_P01
(846 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC010015-1|AAH10015.1| 514|Homo sapiens dyskeratosis congenita ... 184 5e-46
BC009928-1|AAH09928.1| 514|Homo sapiens dyskeratosis congenita ... 184 5e-46
AJ224481-1|CAA11970.1| 514|Homo sapiens dyskerin protein. 184 5e-46
AJ010395-1|CAB51168.1| 524|Homo sapiens dyskerin protein. 184 5e-46
AF067023-1|AAD20232.1| 514|Homo sapiens dyskerin protein. 184 5e-46
AF067008-1|AAD11815.1| 514|Homo sapiens dyskerin protein. 184 5e-46
U59151-1|AAB94299.1| 514|Homo sapiens Cbf5p homolog protein. 183 6e-46
BC036785-1|AAH36785.1| 290|Homo sapiens chromosome 20 open read... 33 1.3
AL021578-12|CAC18107.1| 290|Homo sapiens chromosome 20 open rea... 33 1.3
AB017802-1|BAA76405.1| 290|Homo sapiens clg01 protein. 33 1.3
BC030601-1|AAH30601.1| 349|Homo sapiens TruB pseudouridine (psi... 31 4.0
AL355340-1|CAH73219.1| 349|Homo sapiens TruB pseudouridine (psi... 31 4.0
AK223567-1|BAD97287.1| 349|Homo sapiens TruB pseudouridine (psi... 31 4.0
AF448144-1|AAL40350.1| 349|Homo sapiens TruB pseudouridine synt... 31 4.0
AB011085-1|BAA25439.2| 412|Homo sapiens KIAA0513 protein protein. 31 6.9
>BC010015-1|AAH10015.1| 514|Homo sapiens dyskeratosis congenita 1,
dyskerin protein.
Length = 514
Score = 184 bits (447), Expect = 5e-46
Identities = 86/147 (58%), Positives = 108/147 (73%)
Frame = +1
Query: 253 EKKKKKNKDGVSLGAFQTIGDFKIEPSESVKKLDTAYWPLLLKNFDRLNVRTNHYTPLPF 432
+KK++K+ + Q +F I+P V KLDT+ WPLLLKNFD+LNVRT HYTPL
Sbjct: 15 KKKERKSLPEEDVAEIQHAEEFLIKPESKVAKLDTSQWPLLLKNFDKLNVRTTHYTPLAC 74
Query: 433 GNSPLKRPISDYVKSGFINVXKPSNPSSHEVVSWIKRXLKVEKTGHSGTLDPKVTGXLIV 612
G++PLKR I DY+++GFIN+ KPSNPSSHEVV+WI+R L+VEKTGHSGTLDPKVTG LIV
Sbjct: 75 GSNPLKREIGDYIRTGFINLDKPSNPSSHEVVAWIRRILRVEKTGHSGTLDPKVTGCLIV 134
Query: 613 CIDRAHETRXNHKQNAGQRSMVAVFNL 693
CI+RA TR Q + + V + L
Sbjct: 135 CIERA--TRLVKSQQSAGKEYVGIVRL 159
>BC009928-1|AAH09928.1| 514|Homo sapiens dyskeratosis congenita 1,
dyskerin protein.
Length = 514
Score = 184 bits (447), Expect = 5e-46
Identities = 86/147 (58%), Positives = 108/147 (73%)
Frame = +1
Query: 253 EKKKKKNKDGVSLGAFQTIGDFKIEPSESVKKLDTAYWPLLLKNFDRLNVRTNHYTPLPF 432
+KK++K+ + Q +F I+P V KLDT+ WPLLLKNFD+LNVRT HYTPL
Sbjct: 15 KKKERKSLPEEDVAEIQHAEEFLIKPESKVAKLDTSQWPLLLKNFDKLNVRTTHYTPLAC 74
Query: 433 GNSPLKRPISDYVKSGFINVXKPSNPSSHEVVSWIKRXLKVEKTGHSGTLDPKVTGXLIV 612
G++PLKR I DY+++GFIN+ KPSNPSSHEVV+WI+R L+VEKTGHSGTLDPKVTG LIV
Sbjct: 75 GSNPLKREIGDYIRTGFINLDKPSNPSSHEVVAWIRRILRVEKTGHSGTLDPKVTGCLIV 134
Query: 613 CIDRAHETRXNHKQNAGQRSMVAVFNL 693
CI+RA TR Q + + V + L
Sbjct: 135 CIERA--TRLVKSQQSAGKEYVGIVRL 159
>AJ224481-1|CAA11970.1| 514|Homo sapiens dyskerin protein.
Length = 514
Score = 184 bits (447), Expect = 5e-46
Identities = 86/147 (58%), Positives = 108/147 (73%)
Frame = +1
Query: 253 EKKKKKNKDGVSLGAFQTIGDFKIEPSESVKKLDTAYWPLLLKNFDRLNVRTNHYTPLPF 432
+KK++K+ + Q +F I+P V KLDT+ WPLLLKNFD+LNVRT HYTPL
Sbjct: 15 KKKERKSLPEEDVAEIQHAEEFLIKPESKVAKLDTSQWPLLLKNFDKLNVRTTHYTPLAC 74
Query: 433 GNSPLKRPISDYVKSGFINVXKPSNPSSHEVVSWIKRXLKVEKTGHSGTLDPKVTGXLIV 612
G++PLKR I DY+++GFIN+ KPSNPSSHEVV+WI+R L+VEKTGHSGTLDPKVTG LIV
Sbjct: 75 GSNPLKREIGDYIRTGFINLDKPSNPSSHEVVAWIRRILRVEKTGHSGTLDPKVTGCLIV 134
Query: 613 CIDRAHETRXNHKQNAGQRSMVAVFNL 693
CI+RA TR Q + + V + L
Sbjct: 135 CIERA--TRLVKSQQSAGKEYVGIVRL 159
>AJ010395-1|CAB51168.1| 524|Homo sapiens dyskerin protein.
Length = 524
Score = 184 bits (447), Expect = 5e-46
Identities = 86/147 (58%), Positives = 108/147 (73%)
Frame = +1
Query: 253 EKKKKKNKDGVSLGAFQTIGDFKIEPSESVKKLDTAYWPLLLKNFDRLNVRTNHYTPLPF 432
+KK++K+ + Q +F I+P V KLDT+ WPLLLKNFD+LNVRT HYTPL
Sbjct: 15 KKKERKSLPEEDVAEIQHAEEFLIKPESKVAKLDTSQWPLLLKNFDKLNVRTTHYTPLAC 74
Query: 433 GNSPLKRPISDYVKSGFINVXKPSNPSSHEVVSWIKRXLKVEKTGHSGTLDPKVTGXLIV 612
G++PLKR I DY+++GFIN+ KPSNPSSHEVV+WI+R L+VEKTGHSGTLDPKVTG LIV
Sbjct: 75 GSNPLKREIGDYIRTGFINLDKPSNPSSHEVVAWIRRILRVEKTGHSGTLDPKVTGCLIV 134
Query: 613 CIDRAHETRXNHKQNAGQRSMVAVFNL 693
CI+RA TR Q + + V + L
Sbjct: 135 CIERA--TRLVKSQQSAGKEYVGIVRL 159
>AF067023-1|AAD20232.1| 514|Homo sapiens dyskerin protein.
Length = 514
Score = 184 bits (447), Expect = 5e-46
Identities = 86/147 (58%), Positives = 108/147 (73%)
Frame = +1
Query: 253 EKKKKKNKDGVSLGAFQTIGDFKIEPSESVKKLDTAYWPLLLKNFDRLNVRTNHYTPLPF 432
+KK++K+ + Q +F I+P V KLDT+ WPLLLKNFD+LNVRT HYTPL
Sbjct: 15 KKKERKSLPEEDVAEIQHAEEFLIKPESKVAKLDTSQWPLLLKNFDKLNVRTTHYTPLAC 74
Query: 433 GNSPLKRPISDYVKSGFINVXKPSNPSSHEVVSWIKRXLKVEKTGHSGTLDPKVTGXLIV 612
G++PLKR I DY+++GFIN+ KPSNPSSHEVV+WI+R L+VEKTGHSGTLDPKVTG LIV
Sbjct: 75 GSNPLKREIGDYIRTGFINLDKPSNPSSHEVVAWIRRILRVEKTGHSGTLDPKVTGCLIV 134
Query: 613 CIDRAHETRXNHKQNAGQRSMVAVFNL 693
CI+RA TR Q + + V + L
Sbjct: 135 CIERA--TRLVKSQQSAGKEYVGIVRL 159
>AF067008-1|AAD11815.1| 514|Homo sapiens dyskerin protein.
Length = 514
Score = 184 bits (447), Expect = 5e-46
Identities = 86/147 (58%), Positives = 108/147 (73%)
Frame = +1
Query: 253 EKKKKKNKDGVSLGAFQTIGDFKIEPSESVKKLDTAYWPLLLKNFDRLNVRTNHYTPLPF 432
+KK++K+ + Q +F I+P V KLDT+ WPLLLKNFD+LNVRT HYTPL
Sbjct: 15 KKKERKSLPEEDVAEIQHAEEFLIKPESKVAKLDTSQWPLLLKNFDKLNVRTTHYTPLAC 74
Query: 433 GNSPLKRPISDYVKSGFINVXKPSNPSSHEVVSWIKRXLKVEKTGHSGTLDPKVTGXLIV 612
G++PLKR I DY+++GFIN+ KPSNPSSHEVV+WI+R L+VEKTGHSGTLDPKVTG LIV
Sbjct: 75 GSNPLKREIGDYIRTGFINLDKPSNPSSHEVVAWIRRILRVEKTGHSGTLDPKVTGCLIV 134
Query: 613 CIDRAHETRXNHKQNAGQRSMVAVFNL 693
CI+RA TR Q + + V + L
Sbjct: 135 CIERA--TRLVKSQQSAGKEYVGIVRL 159
>U59151-1|AAB94299.1| 514|Homo sapiens Cbf5p homolog protein.
Length = 514
Score = 183 bits (446), Expect = 6e-46
Identities = 86/147 (58%), Positives = 108/147 (73%)
Frame = +1
Query: 253 EKKKKKNKDGVSLGAFQTIGDFKIEPSESVKKLDTAYWPLLLKNFDRLNVRTNHYTPLPF 432
+KK++K+ + Q +F I+P V KLDT+ WPLLLKNFD+LNVRT HYTPL
Sbjct: 15 KKKERKSLPEEDVAEIQHAEEFFIKPESKVAKLDTSQWPLLLKNFDKLNVRTTHYTPLAC 74
Query: 433 GNSPLKRPISDYVKSGFINVXKPSNPSSHEVVSWIKRXLKVEKTGHSGTLDPKVTGXLIV 612
G++PLKR I DY+++GFIN+ KPSNPSSHEVV+WI+R L+VEKTGHSGTLDPKVTG LIV
Sbjct: 75 GSNPLKREIGDYIRTGFINLDKPSNPSSHEVVAWIRRILRVEKTGHSGTLDPKVTGCLIV 134
Query: 613 CIDRAHETRXNHKQNAGQRSMVAVFNL 693
CI+RA TR Q + + V + L
Sbjct: 135 CIERA--TRLVKSQQSAGKEYVGIVRL 159
>BC036785-1|AAH36785.1| 290|Homo sapiens chromosome 20 open reading
frame 10 protein.
Length = 290
Score = 33.1 bits (72), Expect = 1.3
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +3
Query: 597 GXPYRLHRPXPRDSXKSQTERWAKEYGSRF 686
G P R+H P PR +S T RW K +RF
Sbjct: 213 GLPTRIHLPAPRVMCRSSTLRWVKRRCTRF 242
>AL021578-12|CAC18107.1| 290|Homo sapiens chromosome 20 open
reading frame 10 protein.
Length = 290
Score = 33.1 bits (72), Expect = 1.3
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +3
Query: 597 GXPYRLHRPXPRDSXKSQTERWAKEYGSRF 686
G P R+H P PR +S T RW K +RF
Sbjct: 213 GLPTRIHLPAPRVMCRSSTLRWVKRRCTRF 242
>AB017802-1|BAA76405.1| 290|Homo sapiens clg01 protein.
Length = 290
Score = 33.1 bits (72), Expect = 1.3
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +3
Query: 597 GXPYRLHRPXPRDSXKSQTERWAKEYGSRF 686
G P R+H P PR +S T RW K +RF
Sbjct: 213 GLPTRIHLPAPRVMCRSSTLRWVKRRCTRF 242
>BC030601-1|AAH30601.1| 349|Homo sapiens TruB pseudouridine (psi)
synthase homolog 1 (E. coli) protein.
Length = 349
Score = 31.5 bits (68), Expect = 4.0
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +1
Query: 532 WIKRXLKVEKTGHSGTLDPKVTGXLIVCI 618
W KR + K GH GTLD G L+V I
Sbjct: 104 WTKRKKQTLKIGHGGTLDSAARGVLVVGI 132
>AL355340-1|CAH73219.1| 349|Homo sapiens TruB pseudouridine (psi)
synthase homolog 1 (E. coli) protein.
Length = 349
Score = 31.5 bits (68), Expect = 4.0
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +1
Query: 532 WIKRXLKVEKTGHSGTLDPKVTGXLIVCI 618
W KR + K GH GTLD G L+V I
Sbjct: 104 WTKRKKQTLKIGHGGTLDSAARGVLVVGI 132
>AK223567-1|BAD97287.1| 349|Homo sapiens TruB pseudouridine (psi)
synthase homolog 1 variant protein.
Length = 349
Score = 31.5 bits (68), Expect = 4.0
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +1
Query: 532 WIKRXLKVEKTGHSGTLDPKVTGXLIVCI 618
W KR + K GH GTLD G L+V I
Sbjct: 104 WTKRKKQTLKIGHGGTLDSAARGVLVVGI 132
>AF448144-1|AAL40350.1| 349|Homo sapiens TruB pseudouridine
synthase-like protein 1 protein.
Length = 349
Score = 31.5 bits (68), Expect = 4.0
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +1
Query: 532 WIKRXLKVEKTGHSGTLDPKVTGXLIVCI 618
W KR + K GH GTLD G L+V I
Sbjct: 104 WTKRKKQTLKIGHGGTLDSAARGVLVVGI 132
>AB011085-1|BAA25439.2| 412|Homo sapiens KIAA0513 protein protein.
Length = 412
Score = 30.7 bits (66), Expect = 6.9
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = +3
Query: 255 EEKEKKQGWCFV--GSFSDNWRL-QNRTFGEREEAGHRLLAFVVEK 383
EE+EK++ WC + D+ R +N TFG+ H +LAF + K
Sbjct: 333 EEEEKREKWCHMTQEERDDSLRFNENITFGQLGTFTHNMLAFGLNK 378
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,073,450
Number of Sequences: 237096
Number of extensions: 2251575
Number of successful extensions: 4479
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 4299
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4462
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10705443456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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