Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_FL5_O18
(801 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 28 0.12
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 0.60
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 0.60
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 24 1.9
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 24 1.9
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 24 1.9
AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase ... 23 3.3
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 23 3.3
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 22 5.8
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 22 5.8
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 22 5.8
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 22 5.8
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 22 5.8
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 22 5.8
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 22 5.8
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 22 5.8
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 22 5.8
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 22 5.8
AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc fi... 22 7.6
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 27.9 bits (59), Expect = 0.12
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = -3
Query: 412 NNAFRSRRD--ISAGSFSLAFGLPASNIAALPKTELLSI-FPFNLGANLFTIGD 260
NNA + R ISA S AFG+P+S + + + E + + PFN ++ D
Sbjct: 471 NNALDALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPAD 524
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.2 bits (45), Expect(2) = 0.60
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +2
Query: 176 SRERKRSGRLYTNKKQ 223
SR R+R +LY NK++
Sbjct: 273 SRSREREQKLYKNKRE 288
Score = 21.4 bits (43), Expect(2) = 0.60
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +2
Query: 146 NGKRQREQCCSRERKRSGR 202
+ + RE+ CSR+R R R
Sbjct: 228 SSRYSRERSCSRDRNREYR 246
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.2 bits (45), Expect(2) = 0.60
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +2
Query: 176 SRERKRSGRLYTNKKQ 223
SR R+R +LY NK++
Sbjct: 273 SRSREREQKLYKNKRE 288
Score = 21.4 bits (43), Expect(2) = 0.60
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +2
Query: 146 NGKRQREQCCSRERKRSGR 202
+ + RE+ CSR+R R R
Sbjct: 228 SSRYSRERSCSRDRNREYR 246
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.8 bits (49), Expect = 1.9
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +3
Query: 207 IQTKNKPADERPGSGERGSPIVKRLAPKLNGNI 305
I+++N+ AD GS G+P+ +L + GN+
Sbjct: 520 IKSENEAADFFSGSCAPGAPLDSKLCQQCVGNL 552
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.8 bits (49), Expect = 1.9
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +3
Query: 207 IQTKNKPADERPGSGERGSPIVKRLAPKLNGNI 305
I+++N+ AD GS G+P+ +L + GN+
Sbjct: 520 IKSENEAADFFSGSCAPGAPLDSKLCQQCVGNL 552
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.8 bits (49), Expect = 1.9
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +3
Query: 207 IQTKNKPADERPGSGERGSPIVKRLAPKLNGNI 305
I+++N+ AD GS G+P+ +L + GN+
Sbjct: 520 IKSENEAADFFSGSCAPGAPLDSKLCQQCVGNL 552
>AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase
protein.
Length = 492
Score = 23.0 bits (47), Expect = 3.3
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = -1
Query: 420 FSRTTLFVREETFPRDPFPWPSDCPLRTSRPYP 322
F RT L F PF P PLR +P P
Sbjct: 50 FPRTVLDKEVHVFYGIPFAKPPIGPLRFRKPLP 82
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 23.0 bits (47), Expect = 3.3
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = -1
Query: 420 FSRTTLFVREETFPRDPFPWPSDCPLRTSRPYP 322
F RT L F PF P PLR +P P
Sbjct: 50 FPRTVLDKEVHVFYGIPFAKPPIGPLRFRKPLP 82
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.8
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +2
Query: 176 SRERKRSGRLYTNKKQ 223
SR R+R +LY NK++
Sbjct: 40 SRSREREQKLYKNKRE 55
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 5.8
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +2
Query: 176 SRERKRSGRLYTNKKQ 223
SR R+R +LY NK++
Sbjct: 40 SRSREREQKLYKNKRE 55
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.8
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +2
Query: 176 SRERKRSGRLYTNKKQ 223
SR R+R +LY NK++
Sbjct: 40 SRSREREQKLYKNKRE 55
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.8
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +2
Query: 176 SRERKRSGRLYTNKKQ 223
SR R+R +LY NK++
Sbjct: 40 SRSREREQKLYKNKRE 55
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.8
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +2
Query: 176 SRERKRSGRLYTNKKQ 223
SR R+R +LY NK++
Sbjct: 40 SRSREREQKLYKNKRE 55
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.8
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +2
Query: 176 SRERKRSGRLYTNKKQ 223
SR R+R +LY NK++
Sbjct: 40 SRSREREQKLYKNKRE 55
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.8
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +2
Query: 176 SRERKRSGRLYTNKKQ 223
SR R+R +LY NK++
Sbjct: 40 SRSREREQKLYKNKRE 55
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.8
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +2
Query: 176 SRERKRSGRLYTNKKQ 223
SR R+R +LY NK++
Sbjct: 40 SRSREREQKLYKNKRE 55
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.8
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +2
Query: 176 SRERKRSGRLYTNKKQ 223
SR R+R +LY NK++
Sbjct: 40 SRSREREQKLYKNKRE 55
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.8
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +2
Query: 176 SRERKRSGRLYTNKKQ 223
SR R+R +LY NK++
Sbjct: 40 SRSREREQKLYKNKRE 55
>AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc
finger domain-Z1 isoform protein.
Length = 111
Score = 21.8 bits (44), Expect = 7.6
Identities = 9/30 (30%), Positives = 20/30 (66%)
Frame = +2
Query: 128 HRR*MRNGKRQREQCCSRERKRSGRLYTNK 217
HR+ +N ++++E RER+R R ++++
Sbjct: 56 HRQHSKNEQQRKEMEQMREREREQREHSDR 85
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,752
Number of Sequences: 438
Number of extensions: 4530
Number of successful extensions: 47
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25367793
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -