Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_FL5_O10
(811 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein. 31 3.7
S81243-1|AAB36006.1| 684|Homo sapiens CHN protein. 31 3.7
D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan rec... 31 3.7
AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfam... 31 3.7
AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfam... 31 3.7
AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfam... 31 3.7
AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfam... 31 3.7
AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfam... 31 3.7
AJ420779-1|CAD12646.1| 2347|Homo sapiens calcium channel, voltag... 31 6.5
AF223563-1|AAF60163.1| 1536|Homo sapiens low-voltage-activated c... 31 6.5
AF073931-1|AAD17668.1| 2353|Homo sapiens low-voltage activated c... 31 6.5
AF051946-1|AAC67239.3| 2353|Homo sapiens T-type calcium channel ... 31 6.5
AE006466-3|AAK61268.1| 2373|Homo sapiens voltage dependent t-typ... 31 6.5
>X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein.
Length = 443
Score = 31.5 bits (68), Expect = 3.7
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>S81243-1|AAB36006.1| 684|Homo sapiens CHN protein.
Length = 684
Score = 31.5 bits (68), Expect = 3.7
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 93 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 144
>D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan
receptor protein.
Length = 626
Score = 31.5 bits (68), Expect = 3.7
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 443
Score = 31.5 bits (68), Expect = 3.7
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 3.7
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 3.7
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
>AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 3.7
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 3.7
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
>AJ420779-1|CAD12646.1| 2347|Homo sapiens calcium channel,
voltage-dependent, T type, alphant regulator of
chromatin, sub protein.
Length = 2347
Score = 30.7 bits (66), Expect = 6.5
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +3
Query: 510 RSRPYASSHPPLR-SRATSTRSSNPRIPYTKPPQT*HPFPSIPWTP 644
+S P+ + P L SR S+ S +P + KPP + P PW P
Sbjct: 1089 KSSPFLDAAPSLPDSRRGSSSSGDPPLGDQKPPASLRSSPCAPWGP 1134
>AF223563-1|AAF60163.1| 1536|Homo sapiens low-voltage-activated
calcium channel alpha13.2 subunit delta25B splice
variant protein.
Length = 1536
Score = 30.7 bits (66), Expect = 6.5
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +3
Query: 510 RSRPYASSHPPLR-SRATSTRSSNPRIPYTKPPQT*HPFPSIPWTP 644
+S P+ + P L SR S+ S +P + KPP + P PW P
Sbjct: 272 KSSPFLDAAPSLPDSRRGSSSSGDPPLGDQKPPASLRSSPCAPWGP 317
>AF073931-1|AAD17668.1| 2353|Homo sapiens low-voltage activated
calcium channel alpha 1H protein.
Length = 2353
Score = 30.7 bits (66), Expect = 6.5
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +3
Query: 510 RSRPYASSHPPLR-SRATSTRSSNPRIPYTKPPQT*HPFPSIPWTP 644
+S P+ + P L SR S+ S +P + KPP + P PW P
Sbjct: 1089 KSSPFLDAAPSLPDSRRGSSSSGDPPLGDQKPPASLRSSPCAPWGP 1134
>AF051946-1|AAC67239.3| 2353|Homo sapiens T-type calcium channel alpha
1H subunit protein.
Length = 2353
Score = 30.7 bits (66), Expect = 6.5
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +3
Query: 510 RSRPYASSHPPLR-SRATSTRSSNPRIPYTKPPQT*HPFPSIPWTP 644
+S P+ + P L SR S+ S +P + KPP + P PW P
Sbjct: 1089 KSSPFLDAAPSLPDSRRGSSSSGDPPLGDQKPPASLRSSPCAPWGP 1134
>AE006466-3|AAK61268.1| 2373|Homo sapiens voltage dependent t-type
calcium channel alpha-1H subunit protein.
Length = 2373
Score = 30.7 bits (66), Expect = 6.5
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +3
Query: 510 RSRPYASSHPPLR-SRATSTRSSNPRIPYTKPPQT*HPFPSIPWTP 644
+S P+ + P L SR S+ S +P + KPP + P PW P
Sbjct: 1109 KSSPFLDAAPSLPDSRRGSSSSGDPPLGDQKPPASLRSSPCAPWGP 1154
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,304,909
Number of Sequences: 237096
Number of extensions: 2447757
Number of successful extensions: 9618
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 9230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9604
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10036353240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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