Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_FL5_O09
(851 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 36 4e-04
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 34 0.001
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 31 0.010
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 31 0.013
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 31 0.018
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 30 0.024
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 30 0.031
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 29 0.054
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 29 0.054
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 29 0.054
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 29 0.054
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 29 0.072
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 29 0.072
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 28 0.13
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 28 0.13
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 28 0.13
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 27 0.22
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.29
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.29
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.29
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.29
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.29
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 27 0.29
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 26 0.38
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 23 2.7
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 23 3.6
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 23 4.7
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 36.3 bits (80), Expect = 4e-04
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +2
Query: 113 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANIRESESTVRIQADLQ 277
C++ TS S + L YDRD P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 278 MNWIDKRLSWNA 313
+ W L+W +
Sbjct: 88 LMWEQSHLTWKS 99
Score = 23.4 bits (48), Expect = 2.7
Identities = 8/20 (40%), Positives = 10/20 (50%)
Frame = +1
Query: 505 WPXDMQTCTFKFGSRMHNSD 564
WP D+ CT S H S+
Sbjct: 166 WPYDILNCTIHIASWSHGSN 185
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 34.3 bits (75), Expect = 0.001
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +2
Query: 119 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNW 286
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 287 IDKRLSWNAG 316
+D+RL++ G
Sbjct: 62 VDRRLAFQGG 71
Score = 30.7 bits (66), Expect = 0.018
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 463 RLDISTPXSMQLDNWPXDMQTCTFKFGS 546
RL I M L+N+P D Q C +FGS
Sbjct: 123 RLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 31.5 bits (68), Expect = 0.010
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSW 455
V S+ +WRPD+VL NA A +A + + G V W
Sbjct: 105 VPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEW 143
Score = 26.2 bits (55), Expect = 0.38
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +1
Query: 490 MQLDNWPXDMQTCTFKFGSRMHNSDXMD 573
+ ++ +P D QTC KFGS ++ +D
Sbjct: 155 IDVEYFPFDEQTCVLKFGSWTYDGFKVD 182
Score = 22.2 bits (45), Expect = 6.2
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -3
Query: 321 TPPAFQLSRLSIQFI*RSACIRTVDSDSRML 229
+PPAF SR + C+R + ++ML
Sbjct: 471 SPPAFSHSRCPPEIHKSCICVRFIAEHTKML 501
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 31.1 bits (67), Expect = 0.013
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSW 455
V S+ +WRPD+VL NA A +A ++ G V W
Sbjct: 101 VPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEW 139
Score = 26.2 bits (55), Expect = 0.38
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +1
Query: 490 MQLDNWPXDMQTCTFKFGSRMHNSDXMD 573
+ ++ +P D QTC KFGS ++ +D
Sbjct: 151 IDVEYFPFDEQTCVMKFGSWTYDGFQVD 178
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 30.7 bits (66), Expect = 0.018
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Frame = +2
Query: 140 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 298
++D++L YD P D +V + L +R A I + + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 299 LSWNAGGVGLQHL 337
L +N G L++L
Sbjct: 95 LRFNDFGGRLKYL 107
Score = 22.6 bits (46), Expect = 4.7
Identities = 9/36 (25%), Positives = 17/36 (47%)
Frame = +1
Query: 463 RLDISTPXSMQLDNWPXDMQTCTFKFGSRMHNSDXM 570
R+ ++ M L +P D Q C+ + S +D +
Sbjct: 153 RISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDL 188
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 30.3 bits (65), Expect = 0.024
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 446
+ RLW+PDV++ N+A G Y V NNG+
Sbjct: 100 IPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGT 135
Score = 22.6 bits (46), Expect = 4.7
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 505 WPXDMQTCTFKFGSRMHNSDXMD 573
+P D Q C KFGS ++ +D
Sbjct: 155 FPFDDQRCEMKFGSWTYDGFQLD 177
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 29.9 bits (64), Expect = 0.031
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +3
Query: 324 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 455
G V SE +W PD+VL N A G+Y + +A + G VSW
Sbjct: 104 GVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSW 148
Score = 26.6 bits (56), Expect = 0.29
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +1
Query: 490 MQLDNWPXDMQTCTFKFGSRMHNSDXMD 573
+ ++ +P D Q+C KFGS +N +D
Sbjct: 160 INVEYFPFDEQSCIMKFGSWTYNGAQVD 187
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 29.1 bits (62), Expect = 0.054
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 446
++ +LW+PD+++ N+A G Y V++NGS
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGS 166
Score = 25.4 bits (53), Expect = 0.67
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMNWIDKRLSWNAGGVG 325
++ E + A L++ W+D L WN G
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 124
Score = 24.2 bits (50), Expect = 1.5
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 505 WPXDMQTCTFKFGSRMHNSDXMDSV 579
+P D Q C KFGS ++ + +D V
Sbjct: 186 FPFDDQHCDMKFGSWTYDGNQVDLV 210
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 29.1 bits (62), Expect = 0.054
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 446
++ +LW+PD+++ N+A G Y V++NGS
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGS 166
Score = 25.4 bits (53), Expect = 0.67
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMNWIDKRLSWNAGGVG 325
++ E + A L++ W+D L WN G
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 124
Score = 24.2 bits (50), Expect = 1.5
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 505 WPXDMQTCTFKFGSRMHNSDXMDSV 579
+P D Q C KFGS ++ + +D V
Sbjct: 186 FPFDDQHCDMKFGSWTYDGNQVDLV 210
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 29.1 bits (62), Expect = 0.054
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Frame = +3
Query: 324 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 455
G T V SE +W PD+VL N A G+Y + +A + + G V W
Sbjct: 91 GVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVW 135
Score = 25.4 bits (53), Expect = 0.67
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +1
Query: 490 MQLDNWPXDMQTCTFKFGSRMHNSDXMD 573
+ ++ +P D QTC KFGS ++ +D
Sbjct: 147 IDVEYFPFDEQTCFMKFGSWTYDGYTVD 174
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 29.1 bits (62), Expect = 0.054
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +3
Query: 318 EWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RARVSNNGSVSW 455
E+G T L V SE +W PD+VL N A G + +A + G V W
Sbjct: 88 EYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAILHYTGKVLW 135
Score = 25.4 bits (53), Expect = 0.67
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 505 WPXDMQTCTFKFGSRMHNSDXMD 573
+P D QTC KFGS ++ +D
Sbjct: 152 FPFDQQTCFMKFGSWTYDGIQID 174
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 28.7 bits (61), Expect = 0.072
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 446
++ +LW+PD+++ N+A G Y V++NGS
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHNGS 98
Score = 25.4 bits (53), Expect = 0.67
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMNWIDKRLSWNAGGVG 325
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
Score = 24.2 bits (50), Expect = 1.5
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 505 WPXDMQTCTFKFGSRMHNSDXMDSV 579
+P D Q C KFGS ++ + +D V
Sbjct: 118 FPFDDQHCDMKFGSWTYDGNQVDLV 142
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 28.7 bits (61), Expect = 0.072
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 455
V S+ +WRPD+VL N A G+Y + +A V +G V W
Sbjct: 105 VPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVW 143
Score = 26.2 bits (55), Expect = 0.38
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +1
Query: 487 SMQLDNWPXDMQTCTFKFGSRMHNSDXMD 573
S+ ++ +P D+QTC K GS ++ +D
Sbjct: 154 SIDVEFFPYDVQTCVLKLGSWTYDGFKVD 182
Score = 22.2 bits (45), Expect = 6.2
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -3
Query: 321 TPPAFQLSRLSIQFI*RSACIRTVDSDSRML 229
+PPAF SR + C+R + ++ML
Sbjct: 471 SPPAFSHSRCPPEIHKSCICVRFIAEHTKML 501
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 27.9 bits (59), Expect = 0.13
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Frame = +2
Query: 140 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 298
++D++L YD P D VV + + +R + I + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDER 94
Query: 299 LSWNAGGVGLQHL 337
L +N G L++L
Sbjct: 95 LRFNDFGGRLKYL 107
Score = 22.6 bits (46), Expect = 4.7
Identities = 9/36 (25%), Positives = 17/36 (47%)
Frame = +1
Query: 463 RLDISTPXSMQLDNWPXDMQTCTFKFGSRMHNSDXM 570
R+ ++ M L +P D Q C+ + S +D +
Sbjct: 153 RISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDL 188
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 27.9 bits (59), Expect = 0.13
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Frame = +3
Query: 351 ERLWRPDVVLLNAAATTAGDYALRAR----VSNNGSVSW 455
+++W+PD+VL N A G+Y +R + + NG V W
Sbjct: 106 DKVWKPDIVLFNNA---DGNYEVRYKSNVLIYPNGDVLW 141
Score = 27.9 bits (59), Expect = 0.13
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +1
Query: 505 WPXDMQTCTFKFGSRMHNSD 564
+P D QTC KFGS N D
Sbjct: 158 FPFDQQTCIMKFGSWTFNGD 177
Score = 25.8 bits (54), Expect = 0.51
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +2
Query: 191 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNA---GGVGLQHL 337
K+ VN L ++ N+ E ++ L+ W D +L W+ GG+G+ L
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRL 103
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 27.9 bits (59), Expect = 0.13
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAAATTAGDYALRAR--VSNNGSVSW 455
V R+WRPD +L N A + VS+ G V W
Sbjct: 82 VPYNRVWRPDTILYNNADPQYSSAVINTNVIVSHTGEVVW 121
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 27.1 bits (57), Expect = 0.22
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 463 RLDISTPXSMQLDNWPXDMQTCTFKFGS 546
RL I M+L N+P D Q+C GS
Sbjct: 155 RLTIKAKCPMELRNFPMDRQSCPLILGS 182
Score = 22.2 bits (45), Expect = 6.2
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +3
Query: 351 ERLWRPDVVLLN 386
ER+WRPD N
Sbjct: 115 ERIWRPDTYFYN 126
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 26.6 bits (56), Expect = 0.29
Identities = 11/36 (30%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 446
++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
Score = 25.4 bits (53), Expect = 0.67
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMNWIDKRLSWNAGGVG 325
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
Score = 24.2 bits (50), Expect = 1.5
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 505 WPXDMQTCTFKFGSRMHNSDXMDSV 579
+P D Q C KFGS ++ + +D V
Sbjct: 118 FPFDDQHCDMKFGSWTYDGNQVDLV 142
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 26.6 bits (56), Expect = 0.29
Identities = 11/36 (30%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 446
++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
Score = 25.4 bits (53), Expect = 0.67
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMNWIDKRLSWNAGGVG 325
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
Score = 24.2 bits (50), Expect = 1.5
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 505 WPXDMQTCTFKFGSRMHNSDXMDSV 579
+P D Q C KFGS ++ + +D V
Sbjct: 118 FPFDDQHCDMKFGSWTYDGNQVDLV 142
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 26.6 bits (56), Expect = 0.29
Identities = 11/36 (30%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 446
++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
Score = 25.4 bits (53), Expect = 0.67
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMNWIDKRLSWNAGGVG 325
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
Score = 24.2 bits (50), Expect = 1.5
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 505 WPXDMQTCTFKFGSRMHNSDXMDSV 579
+P D Q C KFGS ++ + +D V
Sbjct: 118 FPFDDQHCDMKFGSWTYDGNQVDLV 142
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 26.6 bits (56), Expect = 0.29
Identities = 11/36 (30%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 446
++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
Score = 25.4 bits (53), Expect = 0.67
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMNWIDKRLSWNAGGVG 325
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
Score = 24.2 bits (50), Expect = 1.5
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 505 WPXDMQTCTFKFGSRMHNSDXMDSV 579
+P D Q C KFGS ++ + +D V
Sbjct: 118 FPFDDQHCDMKFGSWTYDGNQVDLV 142
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 26.6 bits (56), Expect = 0.29
Identities = 11/36 (30%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 446
++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
Score = 25.4 bits (53), Expect = 0.67
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMNWIDKRLSWNAGGVG 325
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
Score = 24.6 bits (51), Expect = 1.2
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 490 MQLDNWPXDMQTCTFKFGSRMHNSDXMDSV 579
M + +P D Q C KFGS ++ + +D V
Sbjct: 113 MDIAWFPFDDQHCDMKFGSWTYDGNQVDLV 142
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 26.6 bits (56), Expect = 0.29
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +1
Query: 502 NWPXDMQTCTFKFGSRMHNSDXMD 573
+WP D C FGS +H+ + ++
Sbjct: 175 SWPYDTHRCRINFGSWVHSGEEVN 198
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 26.2 bits (55), Expect = 0.38
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 463 RLDISTPXSMQLDNWPXDMQTCTFKFGSRMHN 558
RL + ++L+ +P D+Q C F S HN
Sbjct: 135 RLQATLNCGLRLEKFPFDVQECPLIFESWTHN 166
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 23.4 bits (48), Expect = 2.7
Identities = 8/38 (21%), Positives = 19/38 (50%)
Frame = +1
Query: 457 IKRLDISTPXSMQLDNWPXDMQTCTFKFGSRMHNSDXM 570
+ +L + +M+ +++P D Q C+ S H + +
Sbjct: 123 MSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQDL 160
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 23.0 bits (47), Expect = 3.6
Identities = 10/36 (27%), Positives = 16/36 (44%)
Frame = +1
Query: 463 RLDISTPXSMQLDNWPXDMQTCTFKFGSRMHNSDXM 570
+L + +M +P D Q C + S H +D M
Sbjct: 156 KLTLKLSCAMNFLIYPHDTQECKLQMESLSHTTDEM 191
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 22.6 bits (46), Expect = 4.7
Identities = 14/61 (22%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Frame = +2
Query: 191 KIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGGVGLQHLAGVL----GTL 358
+ ++N L + + + ++ + D + N + + S AGGV + AG++ GTL
Sbjct: 239 RAIINTLLSISASCVIAFATSALVSKDSKFNMVHIQNSTLAGGVAIGTAAGMMCQPVGTL 298
Query: 359 V 361
+
Sbjct: 299 I 299
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,932
Number of Sequences: 438
Number of extensions: 4955
Number of successful extensions: 72
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 72
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27431202
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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