Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP09_FL5_N22
         (842 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC31F10.16 |||ChAPs family protein|Schizosaccharomyces pombe|c...    32   0.12 
SPAC823.12 |||zinc finger protein Pep5/Vps11 |Schizosaccharomyce...    30   0.47 
SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein Ucp7|Schizosaccha...    29   0.62 
SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18 |Sch...    29   0.82 
SPBC3H7.09 |mug142||palmitoyltransferase|Schizosaccharomyces pom...    28   1.9  
SPBC3F6.01c |||serine/threonine protein phosphatase |Schizosacch...    26   5.8  

>SPBC31F10.16 |||ChAPs family protein|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 679

 Score = 31.9 bits (69), Expect = 0.12
 Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 6/91 (6%)
 Frame = +3

Query: 75  KFCQSSD-YERALKAAGKILQIAPNEQKAFHCKVVCFLQLHNFKEALATLTNAKNSALAA 251
           KF  S + Y+ AL  A + +  +P+E   + C    +L L +FK AL  L +        
Sbjct: 313 KFLISKERYDLALICAKRAVHASPSEFATWACLADVYLHLEDFKSALLALNSCPMYTYYE 372

Query: 252 DLLF-----EKAYTQYRLNSPKEALQTVDSA 329
              +      +A+  + +N PKE L+  ++A
Sbjct: 373 RDAYPLPPSARAHLPFPVNFPKEELEVENNA 403


>SPAC823.12 |||zinc finger protein Pep5/Vps11 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 906

 Score = 29.9 bits (64), Expect = 0.47
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +3

Query: 78  FCQSSDYERALKAAGKILQIAPNEQKAFHCKVVCFLQLHN 197
           FCQ +D ERALK    +    P++Q+ +   + CF  L N
Sbjct: 743 FCQQNDIERALK---MVRVHGPDQQELYIMMLNCFASLEN 779


>SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein
           Ucp7|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 697

 Score = 29.5 bits (63), Expect = 0.62
 Identities = 10/22 (45%), Positives = 19/22 (86%)
 Frame = +1

Query: 361 RAQILYRLEQYQDCYNLYRDLL 426
           +AQ+L +LE+YQ+  N+++DL+
Sbjct: 506 KAQVLEQLEKYQESLNIWKDLI 527


>SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1316

 Score = 29.1 bits (62), Expect = 0.82
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = +2

Query: 152 ESISLQSGMLSPTPQLQGGSSDINQCQE 235
           E++ L +G L P P+ + G SDIN+ +E
Sbjct: 901 EALDLINGFLQPNPERRLGFSDINEIKE 928


>SPBC3H7.09 |mug142||palmitoyltransferase|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 350

 Score = 27.9 bits (59), Expect = 1.9
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -1

Query: 596 HYTSPALPKVLPELYANSYVFSSNCGSSDVG 504
           H+ SPA+P     LYA + V    C ++D G
Sbjct: 111 HHVSPAVPITFAYLYALAVVSMFKCSTADPG 141


>SPBC3F6.01c |||serine/threonine protein phosphatase
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 473

 Score = 26.2 bits (55), Expect = 5.8
 Identities = 13/49 (26%), Positives = 22/49 (44%)
 Frame = +3

Query: 84  QSSDYERALKAAGKILQIAPNEQKAFHCKVVCFLQLHNFKEALATLTNA 230
           +S DY  A+  A K ++  P   KA+  +    + +   KEA+     A
Sbjct: 51  KSEDYGLAINDASKAIECDPEYAKAYFRRATAHIAIFQPKEAVGDFRKA 99


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,186,540
Number of Sequences: 5004
Number of extensions: 61334
Number of successful extensions: 175
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 175
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 416455520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)