Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP09_FL5_N22
         (842 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    26   0.50 
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    25   0.66 
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    25   0.66 
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    25   0.66 
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    25   1.2  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    23   3.5  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    22   8.1  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    22   8.1  

>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 25.8 bits (54), Expect = 0.50
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = -1

Query: 617 SLRLTKLHYTSPALPKVLPELYANSYVFSSNC 522
           ++ LT L  T  A  + LPE Y     F+ NC
Sbjct: 655 TMELTSLLLTKVAEDRPLPEFYIGGNPFNCNC 686


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 25.4 bits (53), Expect = 0.66
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 592 ILPPHCPKCCPS 557
           ++ P CP CCPS
Sbjct: 348 VIVPFCPDCCPS 359


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 25.4 bits (53), Expect = 0.66
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 592 ILPPHCPKCCPS 557
           ++ P CP CCPS
Sbjct: 348 VIVPFCPDCCPS 359


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 25.4 bits (53), Expect = 0.66
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 592 ILPPHCPKCCPS 557
           ++ P CP CCPS
Sbjct: 348 VIVPFCPDCCPS 359


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +1

Query: 349 LKELRAQILYRLEQYQDCYNLYRDLLKNTTD 441
           LKE   +I +++E  +DC   + DLL    +
Sbjct: 516 LKEKENEIDFKIEVTEDCNKSFNDLLTQVAE 546


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = +1

Query: 547 LAYNSGSTLGNAGE 588
           LA+NSGST G +G+
Sbjct: 236 LAFNSGSTYGVSGQ 249


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 75  KFCQSSDYERALKAAG 122
           +FCQ S Y++ L+  G
Sbjct: 76  EFCQDSGYDKILQVLG 91


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 75  KFCQSSDYERALKAAG 122
           +FCQ S Y++ L+  G
Sbjct: 76  EFCQDSGYDKILQVLG 91


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,478
Number of Sequences: 438
Number of extensions: 4263
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27067071
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)