Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_FL5_N17
(805 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK128066-1|BAC87258.1| 652|Homo sapiens protein ( Homo sapiens ... 32 2.8
Z97653-1|CAJ55832.1| 479|Homo sapiens F-box and leucine-rich re... 31 3.7
BC036680-1|AAH36680.1| 479|Homo sapiens F-box and leucine-rich ... 31 3.7
AE006464-13|AAK61245.1| 581|Homo sapiens possible G-protein rec... 31 3.7
BC027939-1|AAH27939.1| 600|Homo sapiens SNED1 protein protein. 31 4.9
BC098568-1|AAH98568.1| 1164|Homo sapiens chromosome 14 open read... 31 6.4
AK000870-1|BAA91404.1| 614|Homo sapiens protein ( Homo sapiens ... 31 6.4
AB002344-1|BAA21572.2| 1682|Homo sapiens KIAA0346 protein. 31 6.4
DQ177332-1|ABA06605.1| 837|Homo sapiens transient receptor pote... 30 8.5
BC126479-1|AAI26480.1| 200|Homo sapiens chromosome 4 open readi... 30 8.5
BC126477-1|AAI26478.1| 200|Homo sapiens chromosome 4 open readi... 30 8.5
BC069198-1|AAH69198.1| 452|Homo sapiens regulator of chromosome... 30 8.5
AK054839-1|BAB70812.1| 200|Homo sapiens protein ( Homo sapiens ... 30 8.5
>AK128066-1|BAC87258.1| 652|Homo sapiens protein ( Homo sapiens
cDNA FLJ46186 fis, clone TESTI4005013. ).
Length = 652
Score = 31.9 bits (69), Expect = 2.8
Identities = 27/83 (32%), Positives = 34/83 (40%), Gaps = 4/83 (4%)
Frame = -3
Query: 602 PPELPRRFAAEGPCPTIAYGVEQCARVSAPARQVAHPA-RKRHTIEQSLTTCFAP--IPL 432
P LPRR E P PT VS + P R+ HT + L+ P P
Sbjct: 283 PQSLPRRSYNEPPLPT---------PVSPQPKSPKSPELRQSHTPHKCLSLVNTPQHTPS 333
Query: 431 -EGRRTLSSVCPLPPLCSEGPSC 366
+ + + CP PP C GPSC
Sbjct: 334 GQPKPAKAHTCPPPPSCLSGPSC 356
>Z97653-1|CAJ55832.1| 479|Homo sapiens F-box and leucine-rich
repeat protein 16 protein.
Length = 479
Score = 31.5 bits (68), Expect = 3.7
Identities = 19/53 (35%), Positives = 23/53 (43%)
Frame = -3
Query: 647 SIDAGTSATCTRPCLPPELPRRFAAEGPCPTIAYGVEQCARVSAPARQVAHPA 489
SI GT AT RPC PP P P P++A + + A P PA
Sbjct: 34 SITKGTPATKNRPCQPPPPPTL-----PPPSLAAPLSRAALAGGPCTPAGGPA 81
>BC036680-1|AAH36680.1| 479|Homo sapiens F-box and leucine-rich
repeat protein 16 protein.
Length = 479
Score = 31.5 bits (68), Expect = 3.7
Identities = 19/53 (35%), Positives = 23/53 (43%)
Frame = -3
Query: 647 SIDAGTSATCTRPCLPPELPRRFAAEGPCPTIAYGVEQCARVSAPARQVAHPA 489
SI GT AT RPC PP P P P++A + + A P PA
Sbjct: 34 SITKGTPATKNRPCQPPPPPTL-----PPPSLAAPLSRAALAGGPCTPAGGPA 81
>AE006464-13|AAK61245.1| 581|Homo sapiens possible G-protein
receptor protein.
Length = 581
Score = 31.5 bits (68), Expect = 3.7
Identities = 19/53 (35%), Positives = 23/53 (43%)
Frame = -3
Query: 647 SIDAGTSATCTRPCLPPELPRRFAAEGPCPTIAYGVEQCARVSAPARQVAHPA 489
SI GT AT RPC PP P P P++A + + A P PA
Sbjct: 66 SITKGTPATKNRPCQPPPPPTL-----PPPSLAAPLSRAALAGGPCTPAGGPA 113
>BC027939-1|AAH27939.1| 600|Homo sapiens SNED1 protein protein.
Length = 600
Score = 31.1 bits (67), Expect = 4.9
Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = -3
Query: 428 GRRTLSSVCPLPPL-CSEGPSCRAVSTQNGFLSLRSWPGTRPPHRPSLFPAPICRS 264
GR L PL PL C+E CRA +NG S R+ PG P+ F C +
Sbjct: 9 GRLRLEPATPLTPLLCAERDECRAHPCRNGG-SCRNLPGAYVCRCPAGFVGVHCET 63
>BC098568-1|AAH98568.1| 1164|Homo sapiens chromosome 14 open reading
frame 102 protein.
Length = 1164
Score = 30.7 bits (66), Expect = 6.4
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +1
Query: 322 QERRERNPF*VETARHDGPSEQSGGSGQTDESVRRPSRGIG 444
++++ ++ +T R GPS S TD +PSRG+G
Sbjct: 86 KKKKRKHQHHKKTKRKHGPSSSSRSETDTDSEKDKPSRGVG 126
>AK000870-1|BAA91404.1| 614|Homo sapiens protein ( Homo sapiens
cDNA FLJ10008 fis, clone HEMBA1000227. ).
Length = 614
Score = 30.7 bits (66), Expect = 6.4
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +1
Query: 322 QERRERNPF*VETARHDGPSEQSGGSGQTDESVRRPSRGIG 444
++++ ++ +T R GPS S TD +PSRG+G
Sbjct: 86 KKKKRKHQHHKKTKRKHGPSSSSRSETDTDSGKDKPSRGVG 126
>AB002344-1|BAA21572.2| 1682|Homo sapiens KIAA0346 protein.
Length = 1682
Score = 30.7 bits (66), Expect = 6.4
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -3
Query: 401 PLPPLCSEGPSCRAVSTQNGFLSLRSWPGTRPPHRPSLFPAP 276
P PP +GP+CRA + ++G + + GT P RP+ P P
Sbjct: 480 PPPPAWLKGPACRA-AREDGEILEELFFGTEGPPRPAPPPLP 520
>DQ177332-1|ABA06605.1| 837|Homo sapiens transient receptor
potential vanilloid 1a protein.
Length = 837
Score = 30.3 bits (65), Expect = 8.5
Identities = 30/109 (27%), Positives = 42/109 (38%), Gaps = 3/109 (2%)
Frame = -3
Query: 620 CTRPCLPPELPRRFAAEGPCPTIAYGV--EQCARVSAPA-RQVAHPARKRHTIEQSLTTC 450
C R PP PRR P ++ GV + R++A R R+ + Q+ ++
Sbjct: 72 CPRTLSPPA-PRR-----PSGSMIAGVSLKPLLRITARIWRACCSSCRRARSTSQTTSSK 125
Query: 449 FAPIPLEGRRTLSSVCPLPPLCSEGPSCRAVSTQNGFLSLRSWPGTRPP 303
AP GR + CP PPLC P L+L T P
Sbjct: 126 VAPALGSGRAP-ALACPDPPLCLSDPETGKTCLLKAMLNLHDGQNTTIP 173
>BC126479-1|AAI26480.1| 200|Homo sapiens chromosome 4 open reading
frame 38 protein.
Length = 200
Score = 30.3 bits (65), Expect = 8.5
Identities = 33/126 (26%), Positives = 48/126 (38%), Gaps = 4/126 (3%)
Frame = -3
Query: 656 CRKSIDAGTSATCTRPCLPPELPRRFAAEG-PCPTIAYGVEQCARVSAPARQVAHPARKR 480
C + A + A +RP P PR+ G PC + G S+P R A P
Sbjct: 21 CSRPHRAPSPAAPSRPGAPAAGPRKLLVPGLPC-LVRGGWPWTRPDSSPFRPAARPRMSP 79
Query: 479 HTIEQSLTTCFAPIPLEGRRTLSSVCPLPPLCSEGPSCRAVSTQNGFLS--LRS-WPGTR 309
H C P + RR + P P GP R++ ++ F+ LR+ WP
Sbjct: 80 HRSPAVARRCGRPRRRDPRRRRTPALPRPWPGRGGPG-RSLLHRHLFIQQLLRTCWPALP 138
Query: 308 PPHRPS 291
P+
Sbjct: 139 RDRTPA 144
>BC126477-1|AAI26478.1| 200|Homo sapiens chromosome 4 open reading
frame 38 protein.
Length = 200
Score = 30.3 bits (65), Expect = 8.5
Identities = 33/126 (26%), Positives = 48/126 (38%), Gaps = 4/126 (3%)
Frame = -3
Query: 656 CRKSIDAGTSATCTRPCLPPELPRRFAAEG-PCPTIAYGVEQCARVSAPARQVAHPARKR 480
C + A + A +RP P PR+ G PC + G S+P R A P
Sbjct: 21 CSRPHRAPSPAAPSRPGAPAAGPRKLLVPGLPC-LVRGGWPWTRPDSSPFRPAARPRMSP 79
Query: 479 HTIEQSLTTCFAPIPLEGRRTLSSVCPLPPLCSEGPSCRAVSTQNGFLS--LRS-WPGTR 309
H C P + RR + P P GP R++ ++ F+ LR+ WP
Sbjct: 80 HRSPAVARRCGRPRRRDPRRRRTPALPRPWPGRGGPG-RSLLHRHLFIQQLLRTCWPALP 138
Query: 308 PPHRPS 291
P+
Sbjct: 139 RDRTPA 144
>BC069198-1|AAH69198.1| 452|Homo sapiens regulator of chromosome
condensation 1 protein.
Length = 452
Score = 30.3 bits (65), Expect = 8.5
Identities = 19/51 (37%), Positives = 23/51 (45%)
Frame = +1
Query: 181 KRIGGRRTPPNQKT*KINTGKTLAYIAIDRQIGAGNREGRCGGLVPGQERR 333
KRI RR+PP K K A R GA + +G CG P Q+ R
Sbjct: 4 KRIAKRRSPPADAIPKSKKVKDTRAAASRRVPGARSCQGACGPSPPDQKTR 54
>AK054839-1|BAB70812.1| 200|Homo sapiens protein ( Homo sapiens
cDNA FLJ30277 fis, clone BRACE2002752. ).
Length = 200
Score = 30.3 bits (65), Expect = 8.5
Identities = 33/126 (26%), Positives = 48/126 (38%), Gaps = 4/126 (3%)
Frame = -3
Query: 656 CRKSIDAGTSATCTRPCLPPELPRRFAAEG-PCPTIAYGVEQCARVSAPARQVAHPARKR 480
C + A + A +RP P PR+ G PC + G S+P R A P
Sbjct: 21 CSRPHRAPSPAAPSRPGAPAAGPRKLLVPGLPC-LVRGGWPWTRPDSSPFRPAARPRMSP 79
Query: 479 HTIEQSLTTCFAPIPLEGRRTLSSVCPLPPLCSEGPSCRAVSTQNGFLS--LRS-WPGTR 309
H C P + RR + P P GP R++ ++ F+ LR+ WP
Sbjct: 80 HRSPAVARRCGRPRRRDPRRRRTPALPRPWPGRGGPG-RSLLHRHLFIQQLLRTCWPALP 138
Query: 308 PPHRPS 291
P+
Sbjct: 139 RDRTPA 144
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,825,521
Number of Sequences: 237096
Number of extensions: 2414513
Number of successful extensions: 6981
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 6452
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6976
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9924838204
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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