Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP09_FL5_N07
         (803 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_1143 - 10711023-10711884,10713603-10713826,10714253-107145...   188   5e-48
06_01_0493 - 3536207-3537056,3537603-3537826,3538234-3538503,353...   186   1e-47
05_07_0285 + 28982502-28982782,28982888-28982989,28983189-289840...    30   2.5  
07_01_1013 - 8593690-8595006,8595275-8595928,8595951-8596065,859...    28   7.6  

>07_01_1143 -
           10711023-10711884,10713603-10713826,10714253-10714522,
           10715071-10715175
          Length = 486

 Score =  188 bits (458), Expect = 5e-48
 Identities = 87/161 (54%), Positives = 112/161 (69%), Gaps = 2/161 (1%)
 Frame = +1

Query: 202 WEDADFPILCQTCLGDNPYIRMTKEKYGKECKICSRPFTVFRWCPGARMRFKKTEICQTC 381
           WE +DFPI+C++CLGDNPY+RM + +Y KECKIC+RPFTVFRW PG   R+KKTEICQTC
Sbjct: 14  WERSDFPIICESCLGDNPYVRMLRAEYDKECKICARPFTVFRWRPGRDARYKKTEICQTC 73

Query: 382 SKLKNVCQTCLLDLEYGLPIQVRDAALKV--QDDLPRNEVNKEYYIQNLESXLSNSDPTQ 555
            KLKNVCQ CLLDLEYGLP+QVRD AL     D +PR++VN+EY+ +  +          
Sbjct: 74  CKLKNVCQVCLLDLEYGLPVQVRDTALSTNSNDAIPRSDVNREYFAEEHDRRARAGIDYD 133

Query: 556 PTNSLKSKGSSDLLVRLXRTPPYYXKEXTARVLVXGSXGXC 678
            +N  K++ ++D +++L RT PYY K   A V      G C
Sbjct: 134 SSNG-KAR-ANDTILKLQRTAPYY-KRNRAHVCSFYVRGEC 171


>06_01_0493 -
           3536207-3537056,3537603-3537826,3538234-3538503,
           3539042-3539146
          Length = 482

 Score =  186 bits (454), Expect = 1e-47
 Identities = 86/161 (53%), Positives = 113/161 (70%), Gaps = 2/161 (1%)
 Frame = +1

Query: 202 WEDADFPILCQTCLGDNPYIRMTKEKYGKECKICSRPFTVFRWCPGARMRFKKTEICQTC 381
           WE +DFPI+C++CLGDNPY+RM + +Y KECKIC+RPFTVFRW PG   R+KKTEICQTC
Sbjct: 14  WERSDFPIICESCLGDNPYVRMLRAEYDKECKICARPFTVFRWRPGRDARYKKTEICQTC 73

Query: 382 SKLKNVCQTCLLDLEYGLPIQVRDAALKV--QDDLPRNEVNKEYYIQNLESXLSNSDPTQ 555
            KLKNVCQ CLLDLEYGLP+QVRD AL +   D +PR++VN+EY+ +      + +    
Sbjct: 74  CKLKNVCQVCLLDLEYGLPVQVRDTALAINSNDAIPRSDVNREYFAEE-HDRKARAGIDY 132

Query: 556 PTNSLKSKGSSDLLVRLXRTPPYYXKEXTARVLVXGSXGXC 678
            ++  K++  +D +++L RT PYY K   A V      G C
Sbjct: 133 DSSHGKAR-PNDTILKLQRTAPYY-KRNRAHVCSFYVRGEC 171


>05_07_0285 +
           28982502-28982782,28982888-28982989,28983189-28984006,
           28984594-28985050,28985203-28985242
          Length = 565

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +1

Query: 142 IKKGHAMATSKSTNTYNRQNWEDADFPILCQTCLGD 249
           I KG  +AT+ +TN Y RQ +++    I  Q C  D
Sbjct: 148 ITKGGILATTATTNLYRRQRYKEGMKDIQSQCCSPD 183


>07_01_1013 -
           8593690-8595006,8595275-8595928,8595951-8596065,
           8596560-8596861,8596884-8597369
          Length = 957

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 15/32 (46%), Positives = 18/32 (56%)
 Frame = -2

Query: 499 C*LRFEVGHPELLMQHLSLGLADHIPNPINMF 404
           C LRF  GHPEL  + L  G+ DH+     MF
Sbjct: 315 CCLRFFQGHPEL--RKLKNGMPDHLDELDRMF 344


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,331,454
Number of Sequences: 37544
Number of extensions: 387996
Number of successful extensions: 742
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 740
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2185924824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)