Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_FL5_M18
(822 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical pr... 97 1e-20
AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical ... 85 4e-17
AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical ... 61 1e-09
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ... 58 1e-08
AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse trans... 54 1e-07
AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical ... 54 1e-07
U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical pr... 54 2e-07
AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical ... 42 4e-04
AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical ... 38 0.011
Z92781-2|CAB07181.2| 397|Caenorhabditis elegans Hypothetical pr... 29 3.0
AL132948-5|CAC51071.1| 321|Caenorhabditis elegans Hypothetical ... 28 7.0
>U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical
protein F31A9.6 protein.
Length = 358
Score = 97.1 bits (231), Expect = 1e-20
Identities = 54/145 (37%), Positives = 84/145 (57%), Gaps = 2/145 (1%)
Frame = +2
Query: 206 LFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVEGTRSRPRQLTAG 385
++ D +KAFD++ H+ L+ KL ++ L++ + +FLSNRSFR R+ T S + T G
Sbjct: 17 IYLDFSKAFDRLPHDLLLDKLVSLRKNKNLLIWVNEFLSNRSFRVRIGQTLSSRKFATCG 76
Query: 386 VPQGSALSPLLFSLYINDIPRSPETHLAL--FADDTAIYYSCRKMSLLHRRLQIAVATMG 559
VPQG+ LSPLLF +Y+NDI +A FADDT +Y S K LQ A+ +
Sbjct: 77 VPQGAVLSPLLFGIYVNDISSILPEKVACKQFADDTKLYASTPKTE-SENNLQSALDAVV 135
Query: 560 QWFRKWRIDINPTKSAAVLFKRGRL 634
W + ++ +N +K+ V + R+
Sbjct: 136 DWTKGSKLTLNQSKTVHVTVGKRRI 160
>AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical
protein R11E3.3 protein.
Length = 931
Score = 85.4 bits (202), Expect = 4e-17
Identities = 53/176 (30%), Positives = 90/176 (51%), Gaps = 3/176 (1%)
Frame = +2
Query: 101 QFGFRSKHSCVQQVHRLTEHILIGLNRRKQFPTGALF--FDIAKAFDKVWHNGLIYKLYN 274
Q GF+ +HS V ++T I+ GLN + P A+ D+ AFDKV L L
Sbjct: 436 QHGFKPEHSTTTAVIQVTNDIIGGLNMKNP-PERAIMACLDLRAAFDKVPTKKLCNDLME 494
Query: 275 -MGVPDRLVLIIRDFLSNRSFRYRVEGTRSRPRQLTAGVPQGSALSPLLFSLYINDIPRS 451
G+ ++ L + ++L R R + S+ L GVPQGS +SP LF+ Y+ D+P
Sbjct: 495 AQGIEPKIKLWLGNYLHKRLIRTSHDNHWSKWHTLLGGVPQGSVISPNLFTFYLKDMPTQ 554
Query: 452 PETHLALFADDTAIYYSCRKMSLLHRRLQIAVATMGQWFRKWRIDINPTKSAAVLF 619
+T L +ADD +I +K+ ++Q+ + + ++ ++ + I+ KS +F
Sbjct: 555 QDTMLISYADDMSIIARDKKIEKAAEKVQLHIDEIAKYLKERGMSISAEKSTVTVF 610
>AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical
protein C44B12.7 protein.
Length = 389
Score = 60.9 bits (141), Expect = 1e-09
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Frame = +2
Query: 224 KAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVEG-TRSRPRQLTAGVPQGS 400
KAFD+V H+ L+ KL++ G+ DFLS+R+F +V +++GVP+GS
Sbjct: 2 KAFDQVNHSLLLQKLHDFGINPLFCNWFHDFLSSRTFSVKVNNHIDPNIHPISSGVPKGS 61
Query: 401 ALSPLLFSLYINDIPRS--PETHLALFADDTAIY 496
P LF ++IN + S P + FADD +Y
Sbjct: 62 VSGPFLFLIFINSLLLSVPPSISCSAFADDLKVY 95
>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
protein F21E9.1 protein.
Length = 1170
Score = 57.6 bits (133), Expect = 1e-08
Identities = 37/118 (31%), Positives = 64/118 (54%), Gaps = 3/118 (2%)
Frame = +2
Query: 263 KLYNMGVPDRLVLIIRDFLSNRSFRYRVEGTRSRPRQ-LTAGVPQGSALSPLLFSLYIND 439
KL G+ ++FL NR+F ++ S+ +++GVPQGS PLLF L+IN+
Sbjct: 839 KLAKFGLDSLTCSWYKEFLENRTFSVKINKFVSKNSYPISSGVPQGSVSGPLLFILFINN 898
Query: 440 --IPRSPETHLALFADDTAIYYSCRKMSLLHRRLQIAVATMGQWFRKWRIDINPTKSA 607
I +P +++ FADD I+++ +++ + I V+ W + + + PTKSA
Sbjct: 899 LLIDLAPTINISCFADDVKIFHT--DPTIIQNSIDIIVS----WSKLNELPLAPTKSA 950
>AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse
transcriptase protein.
Length = 1066
Score = 54.0 bits (124), Expect = 1e-07
Identities = 35/117 (29%), Positives = 52/117 (44%)
Frame = +2
Query: 98 EQFGFRSKHSCVQQVHRLTEHILIGLNRRKQFPTGALFFDIAKAFDKVWHNGLIYKLYNM 277
EQ GFR S + +H L + +G R Q P +F D KAFD V H + L
Sbjct: 655 EQAGFRRSFSTIDHIHSLQRLLEVG--REYQIPLTLVFIDFKKAFDSVEHQAIWKSLDEQ 712
Query: 278 GVPDRLVLIIRDFLSNRSFRYRVEGTRSRPRQLTAGVPQGSALSPLLFSLYINDIPR 448
G + ++++ N + + R +T GV QG +SP LFS + + R
Sbjct: 713 GADGAYIDLLKECYKNCTTNF-TPFHRPVAVPVTKGVRQGDPISPNLFSACLEHVFR 768
>AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical
protein K10F12.5 protein.
Length = 805
Score = 54.0 bits (124), Expect = 1e-07
Identities = 35/117 (29%), Positives = 52/117 (44%)
Frame = +2
Query: 98 EQFGFRSKHSCVQQVHRLTEHILIGLNRRKQFPTGALFFDIAKAFDKVWHNGLIYKLYNM 277
EQ GFR S + +H L + +G R Q P +F D KAFD V H + L
Sbjct: 394 EQAGFRRSFSTIDHIHSLQRLLEVG--REYQIPLTLVFIDFKKAFDSVEHQAIWKSLDEQ 451
Query: 278 GVPDRLVLIIRDFLSNRSFRYRVEGTRSRPRQLTAGVPQGSALSPLLFSLYINDIPR 448
G + ++++ N + + R +T GV QG +SP LFS + + R
Sbjct: 452 GADGAYIDLLKECYKNCTTNF-TPFHRPVAVPVTKGVRQGDPISPNLFSACLEHVFR 507
>U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical
protein F20B4.7 protein.
Length = 891
Score = 53.6 bits (123), Expect = 2e-07
Identities = 35/117 (29%), Positives = 52/117 (44%)
Frame = +2
Query: 98 EQFGFRSKHSCVQQVHRLTEHILIGLNRRKQFPTGALFFDIAKAFDKVWHNGLIYKLYNM 277
EQ GFR S + +H L + +G R Q P +F D KAFD V H + L
Sbjct: 484 EQAGFRRSFSTIDHIHSLQRLLEVG--REYQIPLTLVFIDFKKAFDTVEHQAIWKSLDEQ 541
Query: 278 GVPDRLVLIIRDFLSNRSFRYRVEGTRSRPRQLTAGVPQGSALSPLLFSLYINDIPR 448
G + ++++ N + + R +T GV QG +SP LFS + + R
Sbjct: 542 GADGAYIDLLKECYKNCTTNF-TPFHRPVAVPVTKGVRQGDPISPNLFSACLEHVFR 597
>AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical
protein Y113G7B.12 protein.
Length = 1042
Score = 42.3 bits (95), Expect = 4e-04
Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 5/102 (4%)
Frame = +2
Query: 206 LFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRV-EGTRSRPRQLTA 382
+ F ++ AFDKV H LI KL + V L R +S ++F +V + S
Sbjct: 890 IHFKLSTAFDKVPHEFLISKLNDFNVHPTLRNWFRKLMSPKTFSVQVNDHLESEKHNCQI 949
Query: 383 GVPQGSALSPLLFSLYIN----DIPRSPETHLALFADDTAIY 496
G P+GS +F ++IN +IP + ++D IY
Sbjct: 950 GAPRGSESRQFMFLVFINSLLCEIPINISCSACAISEDLEIY 991
>AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical
protein Y32G9A.9 protein.
Length = 417
Score = 37.5 bits (83), Expect = 0.011
Identities = 23/81 (28%), Positives = 37/81 (45%)
Frame = +2
Query: 206 LFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVEGTRSRPRQLTAG 385
+F D KAFD V H + L G + + ++++ N + + R +T G
Sbjct: 40 VFIDFKKAFDSVEHQAIWKSLDEQGADEAYIDLLKECYKNCTTNF-TPFLRPITVPVTKG 98
Query: 386 VPQGSALSPLLFSLYINDIPR 448
V QG +SP LFS + + R
Sbjct: 99 VRQGDPISPNLFSACLEHVFR 119
>Z92781-2|CAB07181.2| 397|Caenorhabditis elegans Hypothetical
protein F09C3.3 protein.
Length = 397
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = -1
Query: 189 CLRLFSPIRMCSVRRCTCCTHECLERNPNCSSMRILFAGNK 67
C+ L + + R CTH C + P+C + F NK
Sbjct: 39 CMNLAITVNSKATRLEVKCTHSCKKHTPHCIMVEAKFMDNK 79
>AL132948-5|CAC51071.1| 321|Caenorhabditis elegans Hypothetical
protein Y39B6A.6 protein.
Length = 321
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = -3
Query: 586 VYSPLPEPLSHGGYCDLESPMKQRHLPTRVVDS 488
VYSP+P P H G + S M T V DS
Sbjct: 13 VYSPVPSPSYHNGRSMVSSDMYTYTTDTNVTDS 45
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,860,307
Number of Sequences: 27780
Number of extensions: 392774
Number of successful extensions: 1161
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1090
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1155
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2029935014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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