Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_FL5_M16
(925 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 45 8e-07
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 43 5e-06
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 43 5e-06
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 43 5e-06
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 42 8e-06
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 42 1e-05
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 41 1e-05
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 41 2e-05
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 40 2e-05
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 40 3e-05
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 40 3e-05
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 40 3e-05
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 40 3e-05
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 40 3e-05
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 40 3e-05
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 39 6e-05
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 37 2e-04
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 37 3e-04
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 36 4e-04
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 35 0.001
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 33 0.004
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 32 0.008
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 22 6.8
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 9.0
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 45.2 bits (102), Expect = 8e-07
Identities = 35/107 (32%), Positives = 49/107 (45%), Gaps = 8/107 (7%)
Frame = +2
Query: 131 IASAAECENATSLSLMIDSLLATYDRESPPDSK----IVVNLTLHLRHA---NIRESEST 289
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 290 VRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLXRPDVVLLNAA 427
+ L+ W D + W+ E+G T L V SE + PD+VL N A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNA 113
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 42.7 bits (96), Expect = 5e-06
Identities = 34/139 (24%), Positives = 61/139 (43%), Gaps = 7/139 (5%)
Frame = +2
Query: 155 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQMNW 322
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 323 IDKRLSWNAGEWGCSTWLVSSERLXRPDVVLLNAAAT---TAGDYALRARVSNNGSXSWI 493
+D+RL++ G+ + + R+ +PD N + T R+ +G +
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYS 121
Query: 494 XRLDISXPISMXLDNRPND 550
RL I M L+N P D
Sbjct: 122 SRLTIKAGCPMNLENFPMD 140
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 42.7 bits (96), Expect = 5e-06
Identities = 27/113 (23%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
Frame = +2
Query: 176 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 340
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 341 WNAGEW-GCSTWLVSSERLXRPDVVLLNAA-ATTAGDYALRARVSNNGSXSWI 493
WN E+ G ++ +L +PD+++ N+A G Y V++NGS ++
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYV 170
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 42.7 bits (96), Expect = 5e-06
Identities = 27/113 (23%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
Frame = +2
Query: 176 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 340
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 341 WNAGEW-GCSTWLVSSERLXRPDVVLLNAA-ATTAGDYALRARVSNNGSXSWI 493
WN E+ G ++ +L +PD+++ N+A G Y V++NGS ++
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYV 170
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 41.9 bits (94), Expect = 8e-06
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = +2
Query: 266 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLXRPDVVLLNAA-ATTA 439
++ E + A L++ W+D L WN E+ G ++ +L +PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 440 GDYALRARVSNNGSXSWI 493
G Y V++NGS ++
Sbjct: 85 GTYQTSVVVTHNGSCLYV 102
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 41.5 bits (93), Expect = 1e-05
Identities = 29/111 (26%), Positives = 49/111 (44%), Gaps = 8/111 (7%)
Frame = +2
Query: 119 LTCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLHLRH---ANIRE 277
++C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 5 ISCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKN 64
Query: 278 SESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLXRPDVVLLNAA 427
T + ++ W D +L WN ++ G T V SE + PD+VL N A
Sbjct: 65 QIMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA 113
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 41.1 bits (92), Expect = 1e-05
Identities = 37/137 (27%), Positives = 64/137 (46%), Gaps = 9/137 (6%)
Frame = +2
Query: 110 RFLLTCAIASAAE--CENATSLSLMIDSLLATYD-RESPPDSK---IVVNLTLHLRHA-N 268
R+ L AIA AA + +++ LL TY+ E P ++ +V++ L L +
Sbjct: 3 RWTLMAAIALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIID 62
Query: 269 IRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLXRPDVVLLNAA-ATTAG 442
+ E + L++ W D + WN ++G L + RL +PDV++ N+A G
Sbjct: 63 VDEKNQLLITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDG 122
Query: 443 DYALRARVSNNGSXSWI 493
Y V NNG+ ++
Sbjct: 123 TYPTNVVVKNNGTCLYV 139
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 40.7 bits (91), Expect = 2e-05
Identities = 30/123 (24%), Positives = 53/123 (43%), Gaps = 9/123 (7%)
Frame = +2
Query: 149 CENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLR-------HANIRESESTVRILAD 307
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 308 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLXRPDVVLL-NAAATTAGDYALRARVSNNGS 481
++ +W D +L W+ E+G L V S+ + RPD+VL NA A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 482 XSW 490
W
Sbjct: 137 VEW 139
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 40.3 bits (90), Expect = 2e-05
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Frame = +2
Query: 149 CENATSLSLMIDS---LLATYDRESPPDSKIV--VNLTLHLRHANIRESESTVRILADLQ 313
C++ TS S + L YDR+ P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 314 MNWIDKRLSWNAGEW-GCSTWLVSSERLXRPDVVL 415
+ W L+W + E+ ++ V S + PD+V+
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVM 122
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 39.9 bits (89), Expect = 3e-05
Identities = 20/78 (25%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = +2
Query: 266 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLXRPDVVLLNAA-ATTA 439
++ E + A L++ W+D L WN E+ G ++ +L +PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 440 GDYALRARVSNNGSXSWI 493
G Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 39.9 bits (89), Expect = 3e-05
Identities = 20/78 (25%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = +2
Query: 266 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLXRPDVVLLNAA-ATTA 439
++ E + A L++ W+D L WN E+ G ++ +L +PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 440 GDYALRARVSNNGSXSWI 493
G Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 39.9 bits (89), Expect = 3e-05
Identities = 20/78 (25%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = +2
Query: 266 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLXRPDVVLLNAA-ATTA 439
++ E + A L++ W+D L WN E+ G ++ +L +PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 440 GDYALRARVSNNGSXSWI 493
G Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 39.9 bits (89), Expect = 3e-05
Identities = 20/78 (25%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = +2
Query: 266 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLXRPDVVLLNAA-ATTA 439
++ E + A L++ W+D L WN E+ G ++ +L +PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 440 GDYALRARVSNNGSXSWI 493
G Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 39.9 bits (89), Expect = 3e-05
Identities = 20/78 (25%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = +2
Query: 266 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLXRPDVVLLNAA-ATTA 439
++ E + A L++ W+D L WN E+ G ++ +L +PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 440 GDYALRARVSNNGSXSWI 493
G Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 39.9 bits (89), Expect = 3e-05
Identities = 34/115 (29%), Positives = 53/115 (46%), Gaps = 10/115 (8%)
Frame = +2
Query: 176 MIDSLLATYDRESPPDSKIVVNLT--LHLRHANIRESESTVRILAD---LQMNWIDKRLS 340
+ D LL+ Y+R P LT L L+ + + E +++ ++ W D +L
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVWVEQRWNDYKLK 96
Query: 341 WNAGEWGCSTWL-VSSERLXRPDVVLLNAAATTAGDYAL----RARVSNNGSXSW 490
WN E+G L V SE + PD+VL N A G+Y + +A + G SW
Sbjct: 97 WNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSW 148
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 39.1 bits (87), Expect = 6e-05
Identities = 28/112 (25%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Frame = +2
Query: 176 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 340
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 341 WNAGEWGCSTWL-VSSERLXRPDVVLL-NAAATTAGDYALRARVSNNGSXSW 490
W E+G L V S+ + RPD+VL NA A +A + + G W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEW 143
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 37.1 bits (82), Expect = 2e-04
Identities = 24/90 (26%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Frame = +2
Query: 176 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 340
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 341 WNAGEWGCSTWL-VSSERLXRPDVVLLNAA 427
W E+G L V S+ + RPD+VL N A
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA 121
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 36.7 bits (81), Expect = 3e-04
Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 3/91 (3%)
Frame = +2
Query: 230 IVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLXRPD 406
+V L+LH ++ E + + W D L WNA E+ G V R+ RPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 407 VVLLNAAATTAGDYALRAR--VSNNGSXSWI 493
+L N A + VS+ G W+
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWL 122
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 36.3 bits (80), Expect = 4e-04
Identities = 24/95 (25%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Frame = +2
Query: 227 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLXR 400
K+ VN L ++ N+ E ++ L+ W D +L W+ ++ G + +++ +
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 401 PDVVLLNAAATTAGDYALRAR----VSNNGSXSWI 493
PD+VL N A G+Y +R + + NG W+
Sbjct: 111 PDIVLFNNA---DGNYEVRYKSNVLIYPNGDVLWV 142
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 34.7 bits (76), Expect = 0.001
Identities = 31/137 (22%), Positives = 56/137 (40%), Gaps = 8/137 (5%)
Frame = +2
Query: 164 SLSLMIDSLLATYDRESPPD----SKIVVNLTLHLRHAN-IRESESTVRILADLQMNWID 328
++++++++LL Y+ P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 329 KRLSWNAGEWGCSTWLVSSERLXRPDVVLLNAAATTAGDYAL---RARVSNNGSXSWIXR 499
RLS+ S + ER+ RPD N + + R+S +G + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 500 LDISXPISMXLDNRPND 550
L I M L N P D
Sbjct: 156 LTIKAKCPMELRNFPMD 172
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 33.1 bits (72), Expect = 0.004
Identities = 36/145 (24%), Positives = 65/145 (44%), Gaps = 13/145 (8%)
Frame = +2
Query: 155 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 322
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 323 IDKRLSWNAGEWGCSTWLVSSE---RLXRPDVVLLNA------AATTAGDYALRARVSNN 475
D RL++ G T V SE + PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEF---IRIHHS 123
Query: 476 GSXSWIXRLDISXPISMXLDNRPND 550
GS + RL I+ M L P D
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMD 148
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 31.9 bits (69), Expect = 0.008
Identities = 36/145 (24%), Positives = 64/145 (44%), Gaps = 13/145 (8%)
Frame = +2
Query: 155 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 322
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 323 IDKRLSWNAGEWGCSTWLVSSE---RLXRPDVVLLNA------AATTAGDYALRARVSNN 475
D RL++ G T V SE + PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEF---IRIHHS 123
Query: 476 GSXSWIXRLDISXPISMXLDNRPND 550
GS + RL I+ M L P D
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMD 148
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 22.2 bits (45), Expect = 6.8
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -1
Query: 172 GQ*CCVFAFCRTSYSTSEEKPVTE 101
G+ CC F T Y + K VT+
Sbjct: 602 GEQCCWHCFNCTQYQIRDHKDVTQ 625
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 9.0
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 373 PSAAAPFPCVPTQS 332
PSA AP P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,828
Number of Sequences: 438
Number of extensions: 3722
Number of successful extensions: 35
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30113811
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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