Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_FL5_M14
(838 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 62 8e-12
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 62 8e-12
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 61 1e-11
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 60 2e-11
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 60 2e-11
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 59 4e-11
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 59 6e-11
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 59 6e-11
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 58 1e-10
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 58 1e-10
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 55 7e-10
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 54 1e-09
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 54 2e-09
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 53 3e-09
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 53 4e-09
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 52 7e-09
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 52 7e-09
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 50 2e-08
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 47 2e-07
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 46 3e-07
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 45 8e-07
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 41 1e-05
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 40 2e-05
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 40 4e-05
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 39 5e-05
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 39 5e-05
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 39 5e-05
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 34 0.001
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 32 0.006
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 31 0.010
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 30 0.023
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 30 0.023
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 30 0.023
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 30 0.023
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 25 0.65
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 8.1
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 61.7 bits (143), Expect = 8e-12
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Frame = +3
Query: 33 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 206
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 207 GDYXLRARVSNNGSVSXIXRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMDFVI 383
G Y V++NGS + + + + +P D Q C KFGS ++ + +D V+
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 61.7 bits (143), Expect = 8e-12
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Frame = +3
Query: 33 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 206
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 207 GDYXLRARVSNNGSVSXIXRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMDFVI 383
G Y V++NGS + + + + +P D Q C KFGS ++ + +D V+
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 61.3 bits (142), Expect = 1e-11
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Frame = +3
Query: 33 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 206
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 207 GDYXLRARVSNNGSVSXIXRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMDFVI 383
G Y V++NGS + + + + +P D Q C KFGS ++ + +D V+
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 60.5 bits (140), Expect = 2e-11
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Frame = +3
Query: 33 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 206
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 207 GDYXLRARVSNNGSVSXIXRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMDFVI 383
G Y V+++GS + + M + +P D Q C KFGS ++ + +D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 60.1 bits (139), Expect = 2e-11
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Frame = +3
Query: 33 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 206
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 207 GDYXLRARVSNNGSVSXIXRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMDFVI 383
G Y V+++GS + + M + +P D Q C KFGS ++ + +D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 59.3 bits (137), Expect = 4e-11
Identities = 32/119 (26%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Frame = +3
Query: 33 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 206
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 207 GDYXLRARVSNNGSVSXIXRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMDFVI 383
G Y V+++GS + + + + +P D Q C KFGS ++ + +D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 58.8 bits (136), Expect = 6e-11
Identities = 31/119 (26%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
Frame = +3
Query: 33 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 206
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 207 GDYXLRARVSNNGSVSXIXRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMDFVI 383
G Y V+++GS + + + + +P D Q C KFGS ++ + +D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 58.8 bits (136), Expect = 6e-11
Identities = 31/119 (26%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
Frame = +3
Query: 33 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 206
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 207 GDYXLRARVSNNGSVSXIXRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMDFVI 383
G Y V+++GS + + + + +P D Q C KFGS ++ + +D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 58.0 bits (134), Expect = 1e-10
Identities = 36/145 (24%), Positives = 68/145 (46%), Gaps = 10/145 (6%)
Frame = +3
Query: 33 NIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAG 209
N+ E ++ L+ W D +L W+ ++G + +++W+PD+VL N A G
Sbjct: 65 NVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFNNAD---G 121
Query: 210 DYXLRAR----VSNNGSVSXIXRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMDF 377
+Y +R + + NG V + + ++ + +P D QTC KFGS N D +
Sbjct: 122 NYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIMKFGSWTFNGDQVSL 181
Query: 378 VI--DKTLYXMXE---SRAWDVTDL 437
+ +K + + S WD+ ++
Sbjct: 182 ALYNNKNFVDLSDYWKSGTWDIINV 206
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 57.6 bits (133), Expect = 1e-10
Identities = 31/122 (25%), Positives = 57/122 (46%), Gaps = 4/122 (3%)
Frame = +3
Query: 51 STVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATT---AGDYX 218
S + + + + + W D LSW ++ G + V S+ +W PD+ + N+ T G
Sbjct: 87 SVMELHSWMTLMWTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPP 146
Query: 219 LRARVSNNGSVSXIXRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMDFVIDKTLY 398
V ++GSVS + + + +WP D C FGS +H+ + ++ +DK +
Sbjct: 147 TTCLVFSSGSVSCVPSVKHVAKCATDFSSWPYDTHRCRINFGSWVHSGEEVNIFLDKKGF 206
Query: 399 XM 404
M
Sbjct: 207 HM 208
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 55.2 bits (127), Expect = 7e-10
Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 5/105 (4%)
Frame = +3
Query: 75 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYXL----RARVSN 239
++ W D +L WN E+G L V SE +W PD+VL N A G+Y + +A +
Sbjct: 86 VEQRWNDYKLKWNPEEYGGVEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKY 142
Query: 240 NGSVSXIXRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMD 374
G VS + + ++ +P D Q+C KFGS +N +D
Sbjct: 143 TGDVSWKPPAIYKSSCEINVEYFPFDEQSCIMKFGSWTYNGAQVD 187
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 54.4 bits (125), Expect = 1e-09
Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 2/102 (1%)
Frame = +3
Query: 75 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYXLRARVSNNGS 248
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V NNG+
Sbjct: 76 LKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGT 135
Query: 249 VSXIXRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMD 374
+ + + + +P D Q C KFGS ++ +D
Sbjct: 136 CLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQLD 177
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 53.6 bits (123), Expect = 2e-09
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 2/102 (1%)
Frame = +3
Query: 75 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYXLRARVSNNGS 248
++ +W D +L W+ E+G L V S+ +WRPD+VL NA +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 249 VSXIXRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMD 374
V + + ++ +P D QTC KFGS ++ +D
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVD 178
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 53.2 bits (122), Expect = 3e-09
Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 2/102 (1%)
Frame = +3
Query: 75 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYXLRARVSNNGS 248
++ +W D +L W E+G L V S+ +WRPD+VL NA +A + + G
Sbjct: 81 VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGL 140
Query: 249 VSXIXRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMD 374
V + + ++ +P D QTC KFGS ++ +D
Sbjct: 141 VEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYDGFKVD 182
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 52.8 bits (121), Expect = 4e-09
Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 5/105 (4%)
Frame = +3
Query: 75 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYXL----RARVSN 239
++ +W D +L W E+G L V S+ +WRPD+VL N A G+Y + +A V
Sbjct: 81 VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYY 137
Query: 240 NGSVSXIXRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMD 374
+G V + S+ ++ +P D+QTC K GS ++ +D
Sbjct: 138 SGLVVWQPPAVYKSSCSIDVEFFPYDVQTCVLKLGSWTYDGFKVD 182
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 52.0 bits (119), Expect = 7e-09
Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 3/107 (2%)
Frame = +3
Query: 36 IRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TA 206
I E + T + + +W+D+RL++ G+ + + R+W+PD N + T
Sbjct: 44 ISEVDMTYSMDCYFRQSWVDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTI 103
Query: 207 GDYXLRARVSNNGSVSXIXRLDISTPISMQLDNWPNDMQTCTFKFGS 347
R+ +G V RL I M L+N+P D Q C +FGS
Sbjct: 104 TSPNKFVRLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 52.0 bits (119), Expect = 7e-09
Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 2/102 (1%)
Frame = +3
Query: 75 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYXL-RARVSNNGS 248
L+ W D + W+ E+G T L V SE +W PD+VL N A G + +A + G
Sbjct: 73 LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAILHYTGK 132
Query: 249 VSXIXRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMD 374
V + + + +P D QTC KFGS ++ +D
Sbjct: 133 VLWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGSWTYDGIQID 174
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 50.4 bits (115), Expect = 2e-08
Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 5/105 (4%)
Frame = +3
Query: 75 LQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYXL----RARVSN 239
++ W D +L WN ++G T V SE +W PD+VL N A G+Y + +A + +
Sbjct: 73 VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHH 129
Query: 240 NGSVSXIXRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMD 374
G V + + ++ +P D QTC KFGS ++ +D
Sbjct: 130 TGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGSWTYDGYTVD 174
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 46.8 bits (106), Expect = 2e-07
Identities = 28/93 (30%), Positives = 41/93 (44%), Gaps = 3/93 (3%)
Frame = +3
Query: 78 QMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYXLR---ARVSNNGS 248
+ +W D RLS+ S + ER+WRPD N + + R+S +G
Sbjct: 90 RQSWRDSRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGD 149
Query: 249 VSXIXRLDISTPISMQLDNWPNDMQTCTFKFGS 347
+ RL I M+L N+P D Q+C GS
Sbjct: 150 ILYSMRLTIKAKCPMELRNFPMDRQSCPLILGS 182
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 46.4 bits (105), Expect = 3e-07
Identities = 27/90 (30%), Positives = 39/90 (43%), Gaps = 3/90 (3%)
Frame = +3
Query: 87 WIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATTAGDYXLRAR--VSNNGSVSX 257
W D L WNA E+ G V R+WRPD +L N A + VS+ G V
Sbjct: 62 WTDHHLKWNASEFAGIRVIRVPYNRVWRPDTILYNNADPQYSSAVINTNVIVSHTGEVVW 121
Query: 258 IXRLDISTPISMQLDNWPNDMQTCTFKFGS 347
+ + + ++ +P D Q C K+ S
Sbjct: 122 LSHGIFRSSCDIDVEFFPFDEQRCVLKWAS 151
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 45.2 bits (102), Expect = 8e-07
Identities = 31/121 (25%), Positives = 57/121 (47%), Gaps = 6/121 (4%)
Frame = +3
Query: 21 LRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAA 197
++H N+ E TV L++ W L+W + E+ ++ V S +W PD+V +++
Sbjct: 68 IQHYNVDEYSHTVDFHVMLKLMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIV-MHSVT 126
Query: 198 TTAGDYXL---RARVSNNGSVSXIXRLDISTPISMQLDN--WPNDMQTCTFKFGSRMHNS 362
+ D + V N+G++ + TP+ + D+ WP D+ CT S H S
Sbjct: 127 SVGIDLEMPSVECIVFNSGTILCVP-FTTYTPV-CEYDHTWWPYDILNCTIHIASWSHGS 184
Query: 363 D 365
+
Sbjct: 185 N 185
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 41.1 bits (92), Expect = 1e-05
Identities = 30/122 (24%), Positives = 52/122 (42%), Gaps = 5/122 (4%)
Frame = +3
Query: 30 ANIRESESTVRILADLQMNWIDKRLSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATT 203
A I + + + + W+D+RL +N G T L + R+W PD+ N
Sbjct: 71 ATISDIKMEYSVQLTFREQWLDERLRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGH 129
Query: 204 AGDYXLR---ARVSNNGSVSXIXRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMD 374
+ + R+ NGSV R+ ++ M L +P D Q C+ + S +D +
Sbjct: 130 FHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDLV 189
Query: 375 FV 380
F+
Sbjct: 190 FL 191
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 40.3 bits (90), Expect = 2e-05
Identities = 28/103 (27%), Positives = 46/103 (44%), Gaps = 5/103 (4%)
Frame = +3
Query: 87 WIDKRLSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYXLR---ARVSNNGSV 251
W+D+RL +N G T L + R+W PD+ N + + R+ NGSV
Sbjct: 90 WLDERLRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSV 148
Query: 252 SXIXRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMDFV 380
R+ ++ M L +P D Q C+ + S +D + F+
Sbjct: 149 LYSIRISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDLVFL 191
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 39.5 bits (88), Expect = 4e-05
Identities = 30/107 (28%), Positives = 45/107 (42%), Gaps = 3/107 (2%)
Frame = +3
Query: 36 IRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDY 215
I E I L W D+RL+++ E + +E++W PD N + D
Sbjct: 75 ISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 134
Query: 216 XLR---ARVSNNGSVSXIXRLDISTPISMQLDNWPNDMQTCTFKFGS 347
R R+S +GSV+ R + M L +P D Q CT + S
Sbjct: 135 TERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIES 181
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 39.1 bits (87), Expect = 5e-05
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Frame = +3
Query: 87 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYXLRARVSN 239
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 67 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 122
Query: 240 NGSVSXIXRLDISTPISMQLDNWPNDMQTCTFKFGS 347
+GS++ RL I+ M L +P D Q C + S
Sbjct: 123 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 39.1 bits (87), Expect = 5e-05
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Frame = +3
Query: 87 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYXLRARVSN 239
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 67 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 122
Query: 240 NGSVSXIXRLDISTPISMQLDNWPNDMQTCTFKFGS 347
+GS++ RL I+ M L +P D Q C + S
Sbjct: 123 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 39.1 bits (87), Expect = 5e-05
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Frame = +3
Query: 87 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYXLRARVSN 239
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 240 NGSVSXIXRLDISTPISMQLDNWPNDMQTCTFKFGS 347
+GS++ RL I+ M L +P D Q C + S
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 97
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 34.3 bits (75), Expect = 0.001
Identities = 27/123 (21%), Positives = 55/123 (44%), Gaps = 7/123 (5%)
Frame = +3
Query: 45 SESTVRILAD--LQMNWIDKRLSW--NAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGD 212
+E ++ +AD L +W D RL N E + +WRPD NA T +
Sbjct: 45 NEESMTYVADIFLAQSWRDSRLRLPENMSEDYRILDVDWLHNIWRPDCFFKNAKKVTFHE 104
Query: 213 YXLRAR---VSNNGSVSXIXRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMDFVI 383
+ + ++ ++ + +L + +M+ +++P+D Q C+ S H + + F+
Sbjct: 105 MSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQDLVFIW 164
Query: 384 DKT 392
+ T
Sbjct: 165 NMT 167
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 32.3 bits (70), Expect = 0.006
Identities = 19/81 (23%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Frame = +3
Query: 153 ERLWRPDVVLLNAAATTAGDYXLRAR---VSNNGSVSXIXRLDISTPISMQLDNWPNDMQ 323
+ +WRPD NA + T + + + ++ + +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 324 TCTFKFGSRMHNSDXMDFVID 386
C + S H +D M F D
Sbjct: 176 ECKLQMESLSHTTDEMIFQWD 196
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 31.5 bits (68), Expect = 0.010
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Frame = +3
Query: 159 LWRPDVVLLN--AAATTAGDYX-LRARVSNNGSVSXIXRLDISTPISMQLDNWPNDMQTC 329
+W P V + N ++A T + + + +G V RL + ++L+ +P D+Q C
Sbjct: 97 IWTPTVYVSNEPSSAITGNNVKDVLVSIDPSGMVRLNTRLQATLNCGLRLEKFPFDVQEC 156
Query: 330 TFKFGSRMHNSDXMDFVIDKTLY 398
F S HN V+D LY
Sbjct: 157 PLIFESWTHN------VLDMVLY 173
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 30.3 bits (65), Expect = 0.023
Identities = 26/124 (20%), Positives = 49/124 (39%), Gaps = 3/124 (2%)
Frame = +3
Query: 18 ILRHANIRESESTVRILADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLN 188
+L A+ ES + LQ W D RL + N ++ + + +W PD ++
Sbjct: 94 LLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHG 153
Query: 189 AAATTAGDYXLRARVSNNGSVSXIXRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDX 368
R+ NG+V+ + R + +L+ +P D C+F S +
Sbjct: 154 DFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTA 213
Query: 369 MDFV 380
+ +V
Sbjct: 214 ITYV 217
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 30.3 bits (65), Expect = 0.023
Identities = 26/124 (20%), Positives = 49/124 (39%), Gaps = 3/124 (2%)
Frame = +3
Query: 18 ILRHANIRESESTVRILADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLN 188
+L A+ ES + LQ W D RL + N ++ + + +W PD ++
Sbjct: 94 LLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHG 153
Query: 189 AAATTAGDYXLRARVSNNGSVSXIXRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDX 368
R+ NG+V+ + R + +L+ +P D C+F S +
Sbjct: 154 DFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTA 213
Query: 369 MDFV 380
+ +V
Sbjct: 214 ITYV 217
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 30.3 bits (65), Expect = 0.023
Identities = 26/124 (20%), Positives = 49/124 (39%), Gaps = 3/124 (2%)
Frame = +3
Query: 18 ILRHANIRESESTVRILADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLN 188
+L A+ ES + LQ W D RL + N ++ + + +W PD ++
Sbjct: 145 LLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHG 204
Query: 189 AAATTAGDYXLRARVSNNGSVSXIXRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDX 368
R+ NG+V+ + R + +L+ +P D C+F S +
Sbjct: 205 DFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTA 264
Query: 369 MDFV 380
+ +V
Sbjct: 265 ITYV 268
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 30.3 bits (65), Expect = 0.023
Identities = 26/124 (20%), Positives = 49/124 (39%), Gaps = 3/124 (2%)
Frame = +3
Query: 18 ILRHANIRESESTVRILADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLN 188
+L A+ ES + LQ W D RL + N ++ + + +W PD ++
Sbjct: 94 LLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHG 153
Query: 189 AAATTAGDYXLRARVSNNGSVSXIXRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDX 368
R+ NG+V+ + R + +L+ +P D C+F S +
Sbjct: 154 DFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTA 213
Query: 369 MDFV 380
+ +V
Sbjct: 214 ITYV 217
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 25.4 bits (53), Expect = 0.65
Identities = 15/62 (24%), Positives = 25/62 (40%), Gaps = 3/62 (4%)
Frame = +3
Query: 153 ERLWRPDVVLLNAAATTAGDYXLR---ARVSNNGSVSXIXRLDISTPISMQLDNWPNDMQ 323
+ LW+PD LNA + + + N +V R+ M+ +P D+Q
Sbjct: 69 DSLWQPDPYFLNAKVSEIAALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMDIQ 128
Query: 324 TC 329
C
Sbjct: 129 IC 130
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 8.1
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -3
Query: 140 PSAAAPFPCVPTQS 99
PSA AP P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,633
Number of Sequences: 438
Number of extensions: 3990
Number of successful extensions: 82
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26824317
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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