Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_FL5_M13
(827 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 44 2e-06
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 43 3e-06
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 40 3e-05
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 39 6e-05
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 38 1e-04
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 36 3e-04
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 36 3e-04
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 36 3e-04
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 36 3e-04
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 36 3e-04
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 36 3e-04
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 36 3e-04
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 36 3e-04
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 36 5e-04
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 36 6e-04
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 36 6e-04
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 32 0.007
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 32 0.007
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 31 0.013
DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein. 25 0.85
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 6.0
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 44.0 bits (99), Expect = 2e-06
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Frame = +1
Query: 94 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANIRESESTVRIQADLX 258
C++ TS S + L YDRD P+ K ++ L ++H N+ E TV L
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 259 MNWIDKRLXWNAXEWGCXTWL-VSSEXLWRPDXVL 360
+ W L W + E+ + V S +W PD V+
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVM 122
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 43.2 bits (97), Expect = 3e-06
Identities = 34/103 (33%), Positives = 46/103 (44%), Gaps = 8/103 (7%)
Frame = +1
Query: 76 IASAAECENATSLSLMIDSLLATYDRDSPPDSK----IVVNLTLHLRHA---NIRESEST 234
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 235 VRIQADLXMNWIDKRLXWNAXEWGCXTWL-VSSEXLWRPDXVL 360
+ L W D + W+ E+G T L V SE +W PD VL
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVL 109
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 39.9 bits (89), Expect = 3e-05
Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 8/107 (7%)
Frame = +1
Query: 64 LTCAIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRH---ANIRE 222
++C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 5 ISCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKN 64
Query: 223 SESTVRIQADLXMNWIDKRLXWNAXEWG-CXTWLVSSEXLWRPDXVL 360
T + + W D +L WN ++G T V SE +W PD VL
Sbjct: 65 QIMTTNVWVE--QEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVL 109
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 38.7 bits (86), Expect = 6e-05
Identities = 25/97 (25%), Positives = 43/97 (44%), Gaps = 8/97 (8%)
Frame = +1
Query: 94 CENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQAD 252
C + D LL+ Y++ P + LT+ ++ N++ T + +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLWVE 78
Query: 253 LXMNWIDKRLXWNAXEWGCXTWL-VSSEXLWRPDXVL 360
+W D +L W+ E+G L V S+ +WRPD VL
Sbjct: 79 --QSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVL 113
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 37.5 bits (83), Expect = 1e-04
Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 8/88 (9%)
Frame = +1
Query: 121 MIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQADLXMNWIDKR 279
+ D LL+ Y+R P LT+ L N++ T + + W D +
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVWVE--QRWNDYK 94
Query: 280 LXWNAXEWGCXTWL-VSSEXLWRPDXVL 360
L WN E+G L V SE +W PD VL
Sbjct: 95 LKWNPEEYGGVEMLYVPSENIWLPDIVL 122
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 36.3 bits (80), Expect = 3e-04
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 211 NIRESESTVRIQADLXMNWIDKRLXWNAXEWGCXTWL-VSSEXLWRPDXVLXXAA 372
++ E + A L + W+D L WN E+G L ++ LW+PD ++ +A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 36.3 bits (80), Expect = 3e-04
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 211 NIRESESTVRIQADLXMNWIDKRLXWNAXEWGCXTWL-VSSEXLWRPDXVLXXAA 372
++ E + A L + W+D L WN E+G L ++ LW+PD ++ +A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 36.3 bits (80), Expect = 3e-04
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 211 NIRESESTVRIQADLXMNWIDKRLXWNAXEWGCXTWL-VSSEXLWRPDXVLXXAA 372
++ E + A L + W+D L WN E+G L ++ LW+PD ++ +A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 36.3 bits (80), Expect = 3e-04
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 211 NIRESESTVRIQADLXMNWIDKRLXWNAXEWGCXTWL-VSSEXLWRPDXVLXXAA 372
++ E + A L + W+D L WN E+G L ++ LW+PD ++ +A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 36.3 bits (80), Expect = 3e-04
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 211 NIRESESTVRIQADLXMNWIDKRLXWNAXEWGCXTWL-VSSEXLWRPDXVLXXAA 372
++ E + A L + W+D L WN E+G L ++ LW+PD ++ +A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 36.3 bits (80), Expect = 3e-04
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 211 NIRESESTVRIQADLXMNWIDKRLXWNAXEWGCXTWL-VSSEXLWRPDXVLXXAA 372
++ E + A L + W+D L WN E+G L ++ LW+PD ++ +A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 36.3 bits (80), Expect = 3e-04
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 211 NIRESESTVRIQADLXMNWIDKRLXWNAXEWGCXTWL-VSSEXLWRPDXVLXXAA 372
++ E + A L + W+D L WN E+G L ++ LW+PD ++ +A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 147
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 36.3 bits (80), Expect = 3e-04
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 211 NIRESESTVRIQADLXMNWIDKRLXWNAXEWGCXTWL-VSSEXLWRPDXVLXXAA 372
++ E + A L + W+D L WN E+G L ++ LW+PD ++ +A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 147
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 35.9 bits (79), Expect = 5e-04
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +1
Query: 175 IVVNLTLHLRHANIRESESTVRIQADLXMNWIDKRLXWNAXEW-GCXTWLVSSEXLWRPD 351
+V L+LH ++ E + + W D L WNA E+ G V +WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 352 XVLXXAAAP 378
+L A P
Sbjct: 92 TILYNNADP 100
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 35.5 bits (78), Expect = 6e-04
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +1
Query: 172 KIVVNLTL-HLRHANIRESESTVRIQADLXMNWIDKRLXWNAXEWGCXTWL-VSSEXLWR 345
++ + L L L N++ T + + +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLWVE--QSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 346 PDXVL 360
PD VL
Sbjct: 113 PDIVL 117
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 35.5 bits (78), Expect = 6e-04
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +1
Query: 172 KIVVNLTL-HLRHANIRESESTVRIQADLXMNWIDKRLXWNAXEWGCXTWL-VSSEXLWR 345
++ + L L L N++ T + + +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLWVE--QSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 346 PDXVL 360
PD VL
Sbjct: 113 PDIVL 117
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 31.9 bits (69), Expect = 0.007
Identities = 26/111 (23%), Positives = 46/111 (41%), Gaps = 8/111 (7%)
Frame = +1
Query: 43 IILLPFLLTCAIASAAECENATSLSLMIDSLLATYDRDSPP------DSKIVVNLTLHLR 204
++LL FLL + + + ++D++L YD P D +V + L +R
Sbjct: 9 LVLLTFLLHPSRCTQGKVNYREKEKEVLDNILGGYDARIRPSGENATDGPAIVRVNLFVR 68
Query: 205 H-ANIRESESTVRIQADLXMNWIDKRLXWNAXEWGC-XTWLVSSEXLWRPD 351
A I + + +Q W+D+RL +N L + +W PD
Sbjct: 69 SIATISDIKMEYSVQLTFREQWLDERLRFNDFGGRLKYLTLTDASRVWMPD 119
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 31.9 bits (69), Expect = 0.007
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +1
Query: 172 KIVVNLTL-HLRHANIRESESTVRIQADLXMNWIDKRLXWNAXEWGCXTWL-VSSEXLWR 345
K+ VN L ++ N+ E ++ L W D +L W+ ++G L + + +W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 346 PDXVL 360
PD VL
Sbjct: 111 PDIVL 115
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 31.1 bits (67), Expect = 0.013
Identities = 23/106 (21%), Positives = 46/106 (43%), Gaps = 6/106 (5%)
Frame = +1
Query: 73 AIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTV 237
A+A++ + +++ LL TY+ P +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 238 RIQADLXMNWIDKRLXWNAXEWGCXTWL-VSSEXLWRPDXVLXXAA 372
L + W D + WN ++G L + LW+PD ++ +A
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSA 116
>DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein.
Length = 145
Score = 25.0 bits (52), Expect = 0.85
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 40 YIILLPFLLTCAIAS-AAECENATSLSLMIDSLLAT 144
Y ILL L+TC I S + C T S + D ++AT
Sbjct: 3 YSILLSLLITCLICSPSVHC--GTRPSFVSDEMIAT 36
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.2 bits (45), Expect = 6.0
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -3
Query: 318 PSAAAPLPCVPXQS 277
PSA AP+P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,892
Number of Sequences: 438
Number of extensions: 2093
Number of successful extensions: 28
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26460186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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