Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_FL5_M08
(960 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL355338-1|CAH70366.2| 663|Homo sapiens Zic family member 5 (od... 25 2.7
AF378304-1|AAK55418.1| 639|Homo sapiens zinc family member 5 pr... 25 2.7
AF023142-1|AAD09327.1| 1157|Homo sapiens pre-mRNA splicing SR pr... 26 4.4
BC064990-1|AAH64990.1| 1147|Homo sapiens splicing factor, argini... 26 4.4
BC052286-1|AAH52286.1| 1147|Homo sapiens splicing factor, argini... 26 4.4
BC043353-1|AAH43353.1| 1146|Homo sapiens splicing factor, argini... 26 4.4
BC014921-1|AAH14921.1| 1147|Homo sapiens splicing factor, argini... 26 4.4
AL096764-2|CAM28218.1| 1137|Homo sapiens chromosome X open readi... 25 4.4
AL049563-1|CAM28289.1| 1137|Homo sapiens chromosome X open readi... 25 4.4
AB032998-1|BAA86486.1| 929|Homo sapiens KIAA1172 protein protein. 26 4.5
AB210039-1|BAE06121.1| 856|Homo sapiens DKFZp761D221 variant pr... 26 4.5
AL356913-2|CAI22674.1| 828|Homo sapiens SH3-domain GRB2-like (e... 26 4.5
AL354978-6|CAH71846.1| 828|Homo sapiens SH3-domain GRB2-like (e... 26 4.5
AL139147-3|CAI21943.1| 828|Homo sapiens SH3-domain GRB2-like (e... 26 4.5
AL117417-1|CAB55911.1| 667|Homo sapiens hypothetical protein pr... 26 4.6
AF051782-1|AAC05373.1| 1248|Homo sapiens diaphanous 1 protein. 25 5.7
AF129756-16|AAD18085.1| 1229|Homo sapiens BAT3 protein. 25 9.6
M33521-1|AAA35588.1| 1132|Homo sapiens protein ( Human HLA-B-ass... 25 9.7
M33519-1|AAA35587.1| 1132|Homo sapiens protein ( Human HLA-B-ass... 25 9.7
BX511262-9|CAM45800.1| 1132|Homo sapiens HLA-B associated transc... 25 9.7
AL805934-11|CAI18504.1| 1132|Homo sapiens HLA-B associated trans... 25 9.7
AL670886-2|CAI17785.1| 1132|Homo sapiens HLA-B associated transc... 25 9.7
AL662847-2|CAI17659.1| 1132|Homo sapiens HLA-B associated transc... 25 9.7
AL662801-54|CAI18314.1| 1132|Homo sapiens HLA-B associated trans... 25 9.7
BX511262-8|CAM45799.1| 1126|Homo sapiens HLA-B associated transc... 25 9.7
BC003133-1|AAH03133.1| 1126|Homo sapiens HLA-B associated transc... 25 9.7
BA000025-30|BAB63390.1| 1126|Homo sapiens BAT3 protein. 25 9.7
AL805934-10|CAI18501.1| 1126|Homo sapiens HLA-B associated trans... 25 9.7
AL670886-1|CAI17784.1| 1126|Homo sapiens HLA-B associated transc... 25 9.7
AL662847-1|CAI17658.1| 1126|Homo sapiens HLA-B associated transc... 25 9.7
AL662801-53|CAI18315.1| 1126|Homo sapiens HLA-B associated trans... 25 9.7
BX511262-10|CAM45801.1| 743|Homo sapiens HLA-B associated trans... 25 10.0
AL805934-12|CAI18508.2| 743|Homo sapiens HLA-B associated trans... 25 10.0
AL670886-3|CAM25014.1| 743|Homo sapiens HLA-B associated transc... 25 10.0
AL662847-3|CAO72072.1| 743|Homo sapiens HLA-B associated transc... 25 10.0
AL662801-55|CAI18316.2| 743|Homo sapiens HLA-B associated trans... 25 10.0
>AL355338-1|CAH70366.2| 663|Homo sapiens Zic family member 5
(odd-paired homolog, Drosophila) protein.
Length = 663
Score = 25.4 bits (53), Expect(2) = 2.7
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 445 SPPPPPPP 468
SPPPPPPP
Sbjct: 162 SPPPPPPP 169
Score = 25.4 bits (53), Expect(2) = 2.7
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 448 PPPPPPPXXXKKKXTXXXXXGG 513
PPPPPPP T GG
Sbjct: 166 PPPPPPPPALSGYTTTNSGGGG 187
>AF378304-1|AAK55418.1| 639|Homo sapiens zinc family member 5
protein protein.
Length = 639
Score = 25.4 bits (53), Expect(2) = 2.7
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 445 SPPPPPPP 468
SPPPPPPP
Sbjct: 138 SPPPPPPP 145
Score = 25.4 bits (53), Expect(2) = 2.7
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 448 PPPPPPPXXXKKKXTXXXXXGG 513
PPPPPPP T GG
Sbjct: 142 PPPPPPPPALSGYTTTNSGGGG 163
>AF023142-1|AAD09327.1| 1157|Homo sapiens pre-mRNA splicing SR
protein rA4 protein.
Length = 1157
Score = 25.8 bits (54), Expect(2) = 4.4
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +1
Query: 427 GGGXXXSPPPPPPP 468
G G PPPPPPP
Sbjct: 720 GFGPGVPPPPPPPP 733
Score = 24.2 bits (50), Expect(2) = 4.4
Identities = 10/31 (32%), Positives = 11/31 (35%)
Frame = +1
Query: 448 PPPPPPPXXXKKKXTXXXXXGGXXXXXXTPP 540
PPPPPPP + G PP
Sbjct: 726 PPPPPPPPFLRPGFNPMHLPPGFLPPGPPPP 756
>BC064990-1|AAH64990.1| 1147|Homo sapiens splicing factor,
arginine/serine-rich 15 protein.
Length = 1147
Score = 25.8 bits (54), Expect(2) = 4.4
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +1
Query: 427 GGGXXXSPPPPPPP 468
G G PPPPPPP
Sbjct: 710 GFGPGVPPPPPPPP 723
Score = 24.2 bits (50), Expect(2) = 4.4
Identities = 10/31 (32%), Positives = 11/31 (35%)
Frame = +1
Query: 448 PPPPPPPXXXKKKXTXXXXXGGXXXXXXTPP 540
PPPPPPP + G PP
Sbjct: 716 PPPPPPPPFLRPGFNPMHLPPGFLPPGPPPP 746
>BC052286-1|AAH52286.1| 1147|Homo sapiens splicing factor,
arginine/serine-rich 15 protein.
Length = 1147
Score = 25.8 bits (54), Expect(2) = 4.4
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +1
Query: 427 GGGXXXSPPPPPPP 468
G G PPPPPPP
Sbjct: 710 GFGPGVPPPPPPPP 723
Score = 24.2 bits (50), Expect(2) = 4.4
Identities = 10/31 (32%), Positives = 11/31 (35%)
Frame = +1
Query: 448 PPPPPPPXXXKKKXTXXXXXGGXXXXXXTPP 540
PPPPPPP + G PP
Sbjct: 716 PPPPPPPPFLRPGFNPMHLPPGFLPPGPPPP 746
>BC043353-1|AAH43353.1| 1146|Homo sapiens splicing factor,
arginine/serine-rich 15 protein.
Length = 1146
Score = 25.8 bits (54), Expect(2) = 4.4
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +1
Query: 427 GGGXXXSPPPPPPP 468
G G PPPPPPP
Sbjct: 710 GFGPGVPPPPPPPP 723
Score = 24.2 bits (50), Expect(2) = 4.4
Identities = 10/31 (32%), Positives = 11/31 (35%)
Frame = +1
Query: 448 PPPPPPPXXXKKKXTXXXXXGGXXXXXXTPP 540
PPPPPPP + G PP
Sbjct: 716 PPPPPPPPFLRPGFNPMHLPPGFLPPGPPPP 746
>BC014921-1|AAH14921.1| 1147|Homo sapiens splicing factor,
arginine/serine-rich 15 protein.
Length = 1147
Score = 25.8 bits (54), Expect(2) = 4.4
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +1
Query: 427 GGGXXXSPPPPPPP 468
G G PPPPPPP
Sbjct: 710 GFGPGVPPPPPPPP 723
Score = 24.2 bits (50), Expect(2) = 4.4
Identities = 10/31 (32%), Positives = 11/31 (35%)
Frame = +1
Query: 448 PPPPPPPXXXKKKXTXXXXXGGXXXXXXTPP 540
PPPPPPP + G PP
Sbjct: 716 PPPPPPPPFLRPGFNPMHLPPGFLPPGPPPP 746
>AL096764-2|CAM28218.1| 1137|Homo sapiens chromosome X open reading
frame 45 protein.
Length = 1137
Score = 25.4 bits (53), Expect(2) = 4.4
Identities = 11/32 (34%), Positives = 11/32 (34%)
Frame = +1
Query: 448 PPPPPPPXXXKKKXTXXXXXGGXXXXXXTPPP 543
PPPPPPP G PPP
Sbjct: 929 PPPPPPPPPPPPPPPPPALDVGETSNLQPPPP 960
Score = 24.6 bits (51), Expect(2) = 4.4
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +1
Query: 427 GGGXXXSPPPPPPP 468
G PPPPPPP
Sbjct: 915 GASLPPPPPPPPPP 928
>AL049563-1|CAM28289.1| 1137|Homo sapiens chromosome X open reading
frame 45 protein.
Length = 1137
Score = 25.4 bits (53), Expect(2) = 4.4
Identities = 11/32 (34%), Positives = 11/32 (34%)
Frame = +1
Query: 448 PPPPPPPXXXKKKXTXXXXXGGXXXXXXTPPP 543
PPPPPPP G PPP
Sbjct: 929 PPPPPPPPPPPPPPPPPALDVGETSNLQPPPP 960
Score = 24.6 bits (51), Expect(2) = 4.4
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +1
Query: 427 GGGXXXSPPPPPPP 468
G PPPPPPP
Sbjct: 915 GASLPPPPPPPPPP 928
>AB032998-1|BAA86486.1| 929|Homo sapiens KIAA1172 protein protein.
Length = 929
Score = 25.8 bits (54), Expect(2) = 4.5
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +1
Query: 427 GGGXXXSPPPPPPP 468
G G PPPPPPP
Sbjct: 514 GFGPGVPPPPPPPP 527
Score = 24.2 bits (50), Expect(2) = 4.5
Identities = 10/31 (32%), Positives = 11/31 (35%)
Frame = +1
Query: 448 PPPPPPPXXXKKKXTXXXXXGGXXXXXXTPP 540
PPPPPPP + G PP
Sbjct: 520 PPPPPPPPFLRPGFNPMHLPPGFLPPGPPPP 550
>AB210039-1|BAE06121.1| 856|Homo sapiens DKFZp761D221 variant
protein protein.
Length = 856
Score = 26.2 bits (55), Expect(2) = 4.5
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +1
Query: 427 GGGXXXSPPPPPPP 468
G G +PPPPPPP
Sbjct: 432 GLGQRATPPPPPPP 445
Score = 23.8 bits (49), Expect(2) = 4.5
Identities = 10/32 (31%), Positives = 13/32 (40%)
Frame = +1
Query: 445 SPPPPPPPXXXKKKXTXXXXXGGXXXXXXTPP 540
+PPPPPP + K G +PP
Sbjct: 485 TPPPPPPRPPSRPKLPPGKPGVGDVSRPFSPP 516
>AL356913-2|CAI22674.1| 828|Homo sapiens SH3-domain GRB2-like
(endophilin) interacting protein 1 protein.
Length = 828
Score = 26.2 bits (55), Expect(2) = 4.5
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +1
Query: 427 GGGXXXSPPPPPPP 468
G G +PPPPPPP
Sbjct: 404 GLGQRATPPPPPPP 417
Score = 23.8 bits (49), Expect(2) = 4.5
Identities = 10/32 (31%), Positives = 13/32 (40%)
Frame = +1
Query: 445 SPPPPPPPXXXKKKXTXXXXXGGXXXXXXTPP 540
+PPPPPP + K G +PP
Sbjct: 457 TPPPPPPRPPSRPKLPPGKPGVGDVSRPFSPP 488
>AL354978-6|CAH71846.1| 828|Homo sapiens SH3-domain GRB2-like
(endophilin) interacting protein 1 protein.
Length = 828
Score = 26.2 bits (55), Expect(2) = 4.5
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +1
Query: 427 GGGXXXSPPPPPPP 468
G G +PPPPPPP
Sbjct: 404 GLGQRATPPPPPPP 417
Score = 23.8 bits (49), Expect(2) = 4.5
Identities = 10/32 (31%), Positives = 13/32 (40%)
Frame = +1
Query: 445 SPPPPPPPXXXKKKXTXXXXXGGXXXXXXTPP 540
+PPPPPP + K G +PP
Sbjct: 457 TPPPPPPRPPSRPKLPPGKPGVGDVSRPFSPP 488
>AL139147-3|CAI21943.1| 828|Homo sapiens SH3-domain GRB2-like
(endophilin) interacting protein 1 protein.
Length = 828
Score = 26.2 bits (55), Expect(2) = 4.5
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +1
Query: 427 GGGXXXSPPPPPPP 468
G G +PPPPPPP
Sbjct: 404 GLGQRATPPPPPPP 417
Score = 23.8 bits (49), Expect(2) = 4.5
Identities = 10/32 (31%), Positives = 13/32 (40%)
Frame = +1
Query: 445 SPPPPPPPXXXKKKXTXXXXXGGXXXXXXTPP 540
+PPPPPP + K G +PP
Sbjct: 457 TPPPPPPRPPSRPKLPPGKPGVGDVSRPFSPP 488
>AL117417-1|CAB55911.1| 667|Homo sapiens hypothetical protein
protein.
Length = 667
Score = 25.8 bits (54), Expect(2) = 4.6
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +1
Query: 427 GGGXXXSPPPPPPP 468
G G PPPPPPP
Sbjct: 521 GFGPGVPPPPPPPP 534
Score = 24.2 bits (50), Expect(2) = 4.6
Identities = 10/31 (32%), Positives = 11/31 (35%)
Frame = +1
Query: 448 PPPPPPPXXXKKKXTXXXXXGGXXXXXXTPP 540
PPPPPPP + G PP
Sbjct: 527 PPPPPPPPFLRPGFNPMHLPPGFLPPGPPPP 557
>AF051782-1|AAC05373.1| 1248|Homo sapiens diaphanous 1 protein.
Length = 1248
Score = 25.4 bits (53), Expect(2) = 5.7
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +1
Query: 433 GXXXSPPPPPPP 468
G +PPPPPPP
Sbjct: 594 GDSTTPPPPPPP 605
Score = 24.2 bits (50), Expect(2) = 5.7
Identities = 10/31 (32%), Positives = 11/31 (35%)
Frame = +1
Query: 448 PPPPPPPXXXKKKXTXXXXXGGXXXXXXTPP 540
PPPPPPP + G PP
Sbjct: 605 PPPPPPPLPGGTAISPPPPLSGDATIPPPPP 635
>AF129756-16|AAD18085.1| 1229|Homo sapiens BAT3 protein.
Length = 1229
Score = 24.6 bits (51), Expect(2) = 9.6
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1
Query: 448 PPPPPPPXXXKKKXT 492
PPPPPPP ++ T
Sbjct: 757 PPPPPPPPPAPEQQT 771
Score = 24.2 bits (50), Expect(2) = 9.6
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 445 SPPPPPPP 468
+PPPPPPP
Sbjct: 753 APPPPPPP 760
>M33521-1|AAA35588.1| 1132|Homo sapiens protein ( Human
HLA-B-associated transcript 3 (BAT3) gene, 3' end. ).
Length = 1132
Score = 24.6 bits (51), Expect(2) = 9.7
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1
Query: 448 PPPPPPPXXXKKKXT 492
PPPPPPP ++ T
Sbjct: 660 PPPPPPPPPAPEQQT 674
Score = 24.2 bits (50), Expect(2) = 9.7
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 445 SPPPPPPP 468
+PPPPPPP
Sbjct: 656 APPPPPPP 663
>M33519-1|AAA35587.1| 1132|Homo sapiens protein ( Human
HLA-B-associated transcript 3 (BAT3) mRNA, complete cds.
).
Length = 1132
Score = 24.6 bits (51), Expect(2) = 9.7
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1
Query: 448 PPPPPPPXXXKKKXT 492
PPPPPPP ++ T
Sbjct: 660 PPPPPPPPPAPEQQT 674
Score = 24.2 bits (50), Expect(2) = 9.7
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 445 SPPPPPPP 468
+PPPPPPP
Sbjct: 656 APPPPPPP 663
>BX511262-9|CAM45800.1| 1132|Homo sapiens HLA-B associated
transcript 3 protein.
Length = 1132
Score = 24.6 bits (51), Expect(2) = 9.7
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1
Query: 448 PPPPPPPXXXKKKXT 492
PPPPPPP ++ T
Sbjct: 660 PPPPPPPPPAPEQQT 674
Score = 24.2 bits (50), Expect(2) = 9.7
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 445 SPPPPPPP 468
+PPPPPPP
Sbjct: 656 APPPPPPP 663
>AL805934-11|CAI18504.1| 1132|Homo sapiens HLA-B associated
transcript 3 protein.
Length = 1132
Score = 24.6 bits (51), Expect(2) = 9.7
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1
Query: 448 PPPPPPPXXXKKKXT 492
PPPPPPP ++ T
Sbjct: 660 PPPPPPPPPAPEQQT 674
Score = 24.2 bits (50), Expect(2) = 9.7
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 445 SPPPPPPP 468
+PPPPPPP
Sbjct: 656 APPPPPPP 663
>AL670886-2|CAI17785.1| 1132|Homo sapiens HLA-B associated
transcript 3 protein.
Length = 1132
Score = 24.6 bits (51), Expect(2) = 9.7
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1
Query: 448 PPPPPPPXXXKKKXT 492
PPPPPPP ++ T
Sbjct: 660 PPPPPPPPPAPEQQT 674
Score = 24.2 bits (50), Expect(2) = 9.7
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 445 SPPPPPPP 468
+PPPPPPP
Sbjct: 656 APPPPPPP 663
>AL662847-2|CAI17659.1| 1132|Homo sapiens HLA-B associated
transcript 3 protein.
Length = 1132
Score = 24.6 bits (51), Expect(2) = 9.7
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1
Query: 448 PPPPPPPXXXKKKXT 492
PPPPPPP ++ T
Sbjct: 660 PPPPPPPPPAPEQQT 674
Score = 24.2 bits (50), Expect(2) = 9.7
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 445 SPPPPPPP 468
+PPPPPPP
Sbjct: 656 APPPPPPP 663
>AL662801-54|CAI18314.1| 1132|Homo sapiens HLA-B associated
transcript 3 protein.
Length = 1132
Score = 24.6 bits (51), Expect(2) = 9.7
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1
Query: 448 PPPPPPPXXXKKKXT 492
PPPPPPP ++ T
Sbjct: 660 PPPPPPPPPAPEQQT 674
Score = 24.2 bits (50), Expect(2) = 9.7
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 445 SPPPPPPP 468
+PPPPPPP
Sbjct: 656 APPPPPPP 663
>BX511262-8|CAM45799.1| 1126|Homo sapiens HLA-B associated
transcript 3 protein.
Length = 1126
Score = 24.6 bits (51), Expect(2) = 9.7
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1
Query: 448 PPPPPPPXXXKKKXT 492
PPPPPPP ++ T
Sbjct: 654 PPPPPPPPPAPEQQT 668
Score = 24.2 bits (50), Expect(2) = 9.7
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 445 SPPPPPPP 468
+PPPPPPP
Sbjct: 650 APPPPPPP 657
>BC003133-1|AAH03133.1| 1126|Homo sapiens HLA-B associated
transcript 3 protein.
Length = 1126
Score = 24.6 bits (51), Expect(2) = 9.7
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1
Query: 448 PPPPPPPXXXKKKXT 492
PPPPPPP ++ T
Sbjct: 654 PPPPPPPPPAPEQQT 668
Score = 24.2 bits (50), Expect(2) = 9.7
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 445 SPPPPPPP 468
+PPPPPPP
Sbjct: 650 APPPPPPP 657
>BA000025-30|BAB63390.1| 1126|Homo sapiens BAT3 protein.
Length = 1126
Score = 24.6 bits (51), Expect(2) = 9.7
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1
Query: 448 PPPPPPPXXXKKKXT 492
PPPPPPP ++ T
Sbjct: 654 PPPPPPPPPAPEQQT 668
Score = 24.2 bits (50), Expect(2) = 9.7
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 445 SPPPPPPP 468
+PPPPPPP
Sbjct: 650 APPPPPPP 657
>AL805934-10|CAI18501.1| 1126|Homo sapiens HLA-B associated
transcript 3 protein.
Length = 1126
Score = 24.6 bits (51), Expect(2) = 9.7
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1
Query: 448 PPPPPPPXXXKKKXT 492
PPPPPPP ++ T
Sbjct: 654 PPPPPPPPPAPEQQT 668
Score = 24.2 bits (50), Expect(2) = 9.7
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 445 SPPPPPPP 468
+PPPPPPP
Sbjct: 650 APPPPPPP 657
>AL670886-1|CAI17784.1| 1126|Homo sapiens HLA-B associated
transcript 3 protein.
Length = 1126
Score = 24.6 bits (51), Expect(2) = 9.7
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1
Query: 448 PPPPPPPXXXKKKXT 492
PPPPPPP ++ T
Sbjct: 654 PPPPPPPPPAPEQQT 668
Score = 24.2 bits (50), Expect(2) = 9.7
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 445 SPPPPPPP 468
+PPPPPPP
Sbjct: 650 APPPPPPP 657
>AL662847-1|CAI17658.1| 1126|Homo sapiens HLA-B associated
transcript 3 protein.
Length = 1126
Score = 24.6 bits (51), Expect(2) = 9.7
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1
Query: 448 PPPPPPPXXXKKKXT 492
PPPPPPP ++ T
Sbjct: 654 PPPPPPPPPAPEQQT 668
Score = 24.2 bits (50), Expect(2) = 9.7
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 445 SPPPPPPP 468
+PPPPPPP
Sbjct: 650 APPPPPPP 657
>AL662801-53|CAI18315.1| 1126|Homo sapiens HLA-B associated
transcript 3 protein.
Length = 1126
Score = 24.6 bits (51), Expect(2) = 9.7
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1
Query: 448 PPPPPPPXXXKKKXT 492
PPPPPPP ++ T
Sbjct: 654 PPPPPPPPPAPEQQT 668
Score = 24.2 bits (50), Expect(2) = 9.7
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 445 SPPPPPPP 468
+PPPPPPP
Sbjct: 650 APPPPPPP 657
>BX511262-10|CAM45801.1| 743|Homo sapiens HLA-B associated
transcript 3 protein.
Length = 743
Score = 24.6 bits (51), Expect(2) = 10.0
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1
Query: 448 PPPPPPPXXXKKKXT 492
PPPPPPP ++ T
Sbjct: 690 PPPPPPPPPAPEQQT 704
Score = 24.2 bits (50), Expect(2) = 10.0
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 445 SPPPPPPP 468
+PPPPPPP
Sbjct: 686 APPPPPPP 693
>AL805934-12|CAI18508.2| 743|Homo sapiens HLA-B associated
transcript 3 protein.
Length = 743
Score = 24.6 bits (51), Expect(2) = 10.0
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1
Query: 448 PPPPPPPXXXKKKXT 492
PPPPPPP ++ T
Sbjct: 690 PPPPPPPPPAPEQQT 704
Score = 24.2 bits (50), Expect(2) = 10.0
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 445 SPPPPPPP 468
+PPPPPPP
Sbjct: 686 APPPPPPP 693
>AL670886-3|CAM25014.1| 743|Homo sapiens HLA-B associated
transcript 3 protein.
Length = 743
Score = 24.6 bits (51), Expect(2) = 10.0
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1
Query: 448 PPPPPPPXXXKKKXT 492
PPPPPPP ++ T
Sbjct: 690 PPPPPPPPPAPEQQT 704
Score = 24.2 bits (50), Expect(2) = 10.0
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 445 SPPPPPPP 468
+PPPPPPP
Sbjct: 686 APPPPPPP 693
>AL662847-3|CAO72072.1| 743|Homo sapiens HLA-B associated
transcript 3 protein.
Length = 743
Score = 24.6 bits (51), Expect(2) = 10.0
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1
Query: 448 PPPPPPPXXXKKKXT 492
PPPPPPP ++ T
Sbjct: 690 PPPPPPPPPAPEQQT 704
Score = 24.2 bits (50), Expect(2) = 10.0
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 445 SPPPPPPP 468
+PPPPPPP
Sbjct: 686 APPPPPPP 693
>AL662801-55|CAI18316.2| 743|Homo sapiens HLA-B associated
transcript 3 protein.
Length = 743
Score = 24.6 bits (51), Expect(2) = 10.0
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1
Query: 448 PPPPPPPXXXKKKXT 492
PPPPPPP ++ T
Sbjct: 690 PPPPPPPPPAPEQQT 704
Score = 24.2 bits (50), Expect(2) = 10.0
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 445 SPPPPPPP 468
+PPPPPPP
Sbjct: 686 APPPPPPP 693
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,661,900
Number of Sequences: 237096
Number of extensions: 1747557
Number of successful extensions: 21104
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 5091
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16656
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12714176638
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -