Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP09_FL5_M01
         (883 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X78349-1|CAA55144.1|  686|Drosophila melanogaster Grd protein.         30   3.7  
AE014296-2969|AAF49298.2|  686|Drosophila melanogaster CG7446-PA...    30   3.7  

>X78349-1|CAA55144.1|  686|Drosophila melanogaster Grd protein.
          Length = 686

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 17/70 (24%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
 Frame = +3

Query: 78  ECENATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHANX-RESESTVRIQADLQ 245
           +  N  ++S ++D+LL  YD    PD       + + + +R      E + T  +    +
Sbjct: 102 QSNNHANISELLDNLLRGYDNSIRPDFGGPPATIEVDIMVRSMGPISEVDMTYSMDCYFR 161

Query: 246 MNWIDKRLTW 275
            +W+DKRL +
Sbjct: 162 QSWVDKRLAF 171


>AE014296-2969|AAF49298.2|  686|Drosophila melanogaster CG7446-PA
           protein.
          Length = 686

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 17/70 (24%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
 Frame = +3

Query: 78  ECENATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHANX-RESESTVRIQADLQ 245
           +  N  ++S ++D+LL  YD    PD       + + + +R      E + T  +    +
Sbjct: 102 QSNNHANISELLDNLLRGYDNSIRPDFGGPPATIEVDIMVRSMGPISEVDMTYSMDCYFR 161

Query: 246 MNWIDKRLTW 275
            +W+DKRL +
Sbjct: 162 QSWVDKRLAF 171


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,160,555
Number of Sequences: 53049
Number of extensions: 419701
Number of successful extensions: 974
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 929
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 974
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4291240668
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)