Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_FL5_M01
(883 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical pr... 36 0.038
Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical pr... 36 0.038
AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical ... 36 0.038
AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical ... 36 0.038
AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical ... 36 0.038
AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical ... 36 0.038
Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical pr... 32 0.47
L23649-2|AAA27911.2| 433|Caenorhabditis elegans Coelomocyte upt... 32 0.47
AY611497-1|AAT42012.1| 433|Caenorhabditis elegans CUP-4 protein. 32 0.47
AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine... 32 0.47
X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic... 31 0.83
X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic... 31 0.83
U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated p... 31 0.83
AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical... 31 1.1
Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z99281-1|CAB16504.2| 439|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z78540-1|CAB01736.1| 409|Caenorhabditis elegans Hypothetical pr... 29 4.4
X83887-1|CAA58764.1| 498|Caenorhabditis elegans alpha-1 subunit... 29 4.4
AY523511-1|AAR98633.1| 498|Caenorhabditis elegans acetylcholine... 29 4.4
AF047656-7|AAC05108.2| 462|Caenorhabditis elegans Ligand-gated ... 29 4.4
AF022973-7|AAN84815.1| 480|Caenorhabditis elegans Acetylcholine... 29 4.4
AF022973-6|AAC25796.1| 498|Caenorhabditis elegans Acetylcholine... 29 4.4
Z67737-2|CAA91537.3| 400|Caenorhabditis elegans Hypothetical pr... 28 7.7
>Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 35.9 bits (79), Expect = 0.038
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +3
Query: 108 MIDSLLATYDRDSPPDSKIVVNLTLHLRHA-NXRESESTVRIQADLQMNWIDKRLTWNAG 284
+ + LL+ ++ ++PPD + V L L H E + T+ + + +W+D LTW+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 285 XVG 293
G
Sbjct: 130 LFG 132
>Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 35.9 bits (79), Expect = 0.038
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +3
Query: 108 MIDSLLATYDRDSPPDSKIVVNLTLHLRHA-NXRESESTVRIQADLQMNWIDKRLTWNAG 284
+ + LL+ ++ ++PPD + V L L H E + T+ + + +W+D LTW+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 285 XVG 293
G
Sbjct: 130 LFG 132
>AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 35.9 bits (79), Expect = 0.038
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +3
Query: 108 MIDSLLATYDRDSPPDSKIVVNLTLHLRHA-NXRESESTVRIQADLQMNWIDKRLTWNAG 284
+ + LL+ ++ ++PPD + V L L H E + T+ + + +W+D LTW+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 285 XVG 293
G
Sbjct: 130 LFG 132
>AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 35.9 bits (79), Expect = 0.038
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +3
Query: 108 MIDSLLATYDRDSPPDSKIVVNLTLHLRHA-NXRESESTVRIQADLQMNWIDKRLTWNAG 284
+ + LL+ ++ ++PPD + V L L H E + T+ + + +W+D LTW+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 285 XVG 293
G
Sbjct: 130 LFG 132
>AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 35.9 bits (79), Expect = 0.038
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +3
Query: 108 MIDSLLATYDRDSPPDSKIVVNLTLHLRHA-NXRESESTVRIQADLQMNWIDKRLTWNAG 284
+ + LL+ ++ ++PPD + V L L H E + T+ + + +W+D LTW+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 285 XVG 293
G
Sbjct: 130 LFG 132
>AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 35.9 bits (79), Expect = 0.038
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +3
Query: 108 MIDSLLATYDRDSPPDSKIVVNLTLHLRHA-NXRESESTVRIQADLQMNWIDKRLTWNAG 284
+ + LL+ ++ ++PPD + V L L H E + T+ + + +W+D LTW+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 285 XVG 293
G
Sbjct: 130 LFG 132
>Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical
protein T01H10.1 protein.
Length = 399
Score = 32.3 bits (70), Expect = 0.47
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +3
Query: 132 YDRDSPPDSKIVVNLTLHLRHANXRESESTVRIQADLQMNWIDKRLTWNA 281
YD D+P + L +L+ E E V + +L W D RL+WNA
Sbjct: 65 YDPDAPQRYNYTLFL-YNLKLIQVNEPEEQVSVVLELMEYWYDPRLSWNA 113
>L23649-2|AAA27911.2| 433|Caenorhabditis elegans Coelomocyte uptake
defective protein4 protein.
Length = 433
Score = 32.3 bits (70), Expect = 0.47
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = +3
Query: 165 VVNLTLHLRHANXRESESTVRIQADLQMNWIDKRLTWN 278
+V++ H+ H + + E T+ + + M W D+ L W+
Sbjct: 74 IVDVHWHIIHVSINQREQTMTVHGHIYMRWFDEFLVWD 111
>AY611497-1|AAT42012.1| 433|Caenorhabditis elegans CUP-4 protein.
Length = 433
Score = 32.3 bits (70), Expect = 0.47
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = +3
Query: 165 VVNLTLHLRHANXRESESTVRIQADLQMNWIDKRLTWN 278
+V++ H+ H + + E T+ + + M W D+ L W+
Sbjct: 74 IVDVHWHIIHVSINQREQTMTVHGHIYMRWFDEFLVWD 111
>AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine
receptor protein 15 protein.
Length = 479
Score = 32.3 bits (70), Expect = 0.47
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Frame = +3
Query: 108 MIDSLLATYDRDSPP--DSK--IVVNLTLHLRHA-NXRESESTVRIQADLQMNWIDKRLT 272
+I+ L++ Y R+ P DS +VV+L + L+ N E E + + A L+ W D+ L
Sbjct: 25 LINDLMSGYVREERPTLDSSKPVVVSLGVFLQQIINLSEKEEQLEVNAWLKFQWRDENLR 84
Query: 273 W 275
W
Sbjct: 85 W 85
>X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 31.5 bits (68), Expect = 0.83
Identities = 19/85 (22%), Positives = 36/85 (42%), Gaps = 5/85 (5%)
Frame = +3
Query: 39 YXFLLTCAIASAAECENATSLSLMIDSLLATYDR----DSPPDSKIVVNLTLHLRHA-NX 203
+ LL I+ E + D L+ Y+R + P+ + + L L L +
Sbjct: 7 FLLLLLFCISFIKLTEGNEDAKRLYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDV 66
Query: 204 RESESTVRIQADLQMNWIDKRLTWN 278
E + + L+ WID++L+W+
Sbjct: 67 HEIDQIMTCSVWLKQTWIDRKLSWD 91
>X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 31.5 bits (68), Expect = 0.83
Identities = 19/85 (22%), Positives = 36/85 (42%), Gaps = 5/85 (5%)
Frame = +3
Query: 39 YXFLLTCAIASAAECENATSLSLMIDSLLATYDR----DSPPDSKIVVNLTLHLRHA-NX 203
+ LL I+ E + D L+ Y+R + P+ + + L L L +
Sbjct: 7 FLLLLLFCISFIKLTEGNEDAKRLYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDV 66
Query: 204 RESESTVRIQADLQMNWIDKRLTWN 278
E + + L+ WID++L+W+
Sbjct: 67 HEIDQIMTCSVWLKQTWIDRKLSWD 91
>U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated
protein 38 protein.
Length = 511
Score = 31.5 bits (68), Expect = 0.83
Identities = 19/85 (22%), Positives = 36/85 (42%), Gaps = 5/85 (5%)
Frame = +3
Query: 39 YXFLLTCAIASAAECENATSLSLMIDSLLATYDR----DSPPDSKIVVNLTLHLRHA-NX 203
+ LL I+ E + D L+ Y+R + P+ + + L L L +
Sbjct: 7 FLLLLLFCISFIKLTEGNEDAKRLYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDV 66
Query: 204 RESESTVRIQADLQMNWIDKRLTWN 278
E + + L+ WID++L+W+
Sbjct: 67 HEIDQIMTCSVWLKQTWIDRKLSWD 91
>AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical
protein Y105C5B.16 protein.
Length = 400
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = +3
Query: 132 YDRDSPPDSKIVVNLTLHLRHANXRESESTVRIQADLQMNWIDKRLTWNA 281
YD ++P + L +L+ +E + + + ++ W D RL+WNA
Sbjct: 64 YDNEAPKRYNYTIFL-YYLKLVEVQEPQEKISVVMEIMEYWYDARLSWNA 112
>Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical
protein C35C5.5 protein.
Length = 531
Score = 30.7 bits (66), Expect = 1.4
Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 5/85 (5%)
Frame = +3
Query: 39 YXFLLTCAIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHL-RHANX 203
+ FLL I +S ++++LL Y++ P + V +L R +
Sbjct: 9 HIFLLVIFILHIVTINANKHVSQLLENLLTDYNKAVRPVHNASDALKVKFGANLCRLIDV 68
Query: 204 RESESTVRIQADLQMNWIDKRLTWN 278
E + L+M W DK+LTWN
Sbjct: 69 DEVNQVLTTSLWLEMQWYDKKLTWN 93
>Z99281-1|CAB16504.2| 439|Caenorhabditis elegans Hypothetical
protein Y57G11C.2 protein.
Length = 439
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/100 (19%), Positives = 42/100 (42%), Gaps = 5/100 (5%)
Frame = +3
Query: 21 DLYYSGYXFLLTCAIASAAECENATSLSLMIDSLLATYDRDSPPDSK----IVVNLTLHL 188
+ Y + F L + + E + T + D L+ YD P + +++N++++
Sbjct: 2 NFYDFKFVFYLAISWCNLLEVDGITVAEQLKDVLMEGYDSSIRPVNNERDILIINISMNT 61
Query: 189 RHANXRE-SESTVRIQADLQMNWIDKRLTWNAGXVGLQXL 305
+ +E T+ ++ + W D+ L WN + L
Sbjct: 62 MSVLTLDPAEETINFSSEFILQWKDEFLFWNKSDYNITWL 101
>Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.6 protein.
Length = 401
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +3
Query: 174 LTLHLRHANXRESESTVRIQADLQMNWIDKRLTWNA 281
L +L+ +E E V + +L W D RL+WN+
Sbjct: 79 LLYYLKLVEVQEPEEKVSVVLELVEQWYDPRLSWNS 114
>Z78540-1|CAB01736.1| 409|Caenorhabditis elegans Hypothetical
protein C33G3.3 protein.
Length = 409
Score = 29.1 bits (62), Expect = 4.4
Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = +3
Query: 84 ENATSLS-LMIDSLLATYDRDSPPDSKIVVNLT-LHLRHANXRESESTVRIQADLQMNWI 257
E+A L+ L I +A+ + + +N L+H E + I L+++W
Sbjct: 33 ESAKKLAKLNIPHAIASIPPNYLSQQPVTINFAQFTLQHFELNEHLKDISIHGYLELSWH 92
Query: 258 DKRLTWN 278
D RL WN
Sbjct: 93 DDRLMWN 99
>X83887-1|CAA58764.1| 498|Caenorhabditis elegans alpha-1 subunit of
nicotinic acetylcholinereceptor protein.
Length = 498
Score = 29.1 bits (62), Expect = 4.4
Identities = 23/87 (26%), Positives = 36/87 (41%), Gaps = 5/87 (5%)
Frame = +3
Query: 48 LLTCAIASAAECENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLRHA-----NXRES 212
L++CAI +A + L D L+ Y+ P + +T+HL+ A + E
Sbjct: 7 LISCAILAAPTLGSLQERRLYED-LMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEK 65
Query: 213 ESTVRIQADLQMNWIDKRLTWNAGXVG 293
V + A L W D L W+ G
Sbjct: 66 NQVVYVNAWLDYTWNDYNLVWDKAEYG 92
>AY523511-1|AAR98633.1| 498|Caenorhabditis elegans acetylcholine
receptor (57.1 kD)alternative variant 1 protein.
Length = 498
Score = 29.1 bits (62), Expect = 4.4
Identities = 23/87 (26%), Positives = 36/87 (41%), Gaps = 5/87 (5%)
Frame = +3
Query: 48 LLTCAIASAAECENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLRHA-----NXRES 212
L++CAI +A + L D L+ Y+ P + +T+HL+ A + E
Sbjct: 7 LISCAILAAPTLGSLQERRLYED-LMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEK 65
Query: 213 ESTVRIQADLQMNWIDKRLTWNAGXVG 293
V + A L W D L W+ G
Sbjct: 66 NQVVYVNAWLDYTWNDYNLVWDKAEYG 92
>AF047656-7|AAC05108.2| 462|Caenorhabditis elegans Ligand-gated ion
channel protein 6 protein.
Length = 462
Score = 29.1 bits (62), Expect = 4.4
Identities = 18/81 (22%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Frame = +3
Query: 63 IASAAECENATSLSLMIDSLLATYDRD-SPPDSKIVVNLTLH-LRHANXRESESTVRIQA 236
+ + A E + + +L+ TYD D P D +V +T + + +++ T++
Sbjct: 17 LTAVAFLETSNTETLLQQLFNQTYDVDMKPSDDLTMVTITPNTFILLSMDQTQETIQYSE 76
Query: 237 DLQMNWIDKRLTWNAGXVGLQ 299
+ + W D L WN V +
Sbjct: 77 EFLLRWYDPILHWNQSAVSYE 97
>AF022973-7|AAN84815.1| 480|Caenorhabditis elegans Acetylcholine
receptor protein16, isoform b protein.
Length = 480
Score = 29.1 bits (62), Expect = 4.4
Identities = 23/87 (26%), Positives = 36/87 (41%), Gaps = 5/87 (5%)
Frame = +3
Query: 48 LLTCAIASAAECENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLRHA-----NXRES 212
L++CAI +A + L D L+ Y+ P + +T+HL+ A + E
Sbjct: 7 LISCAILAAPTLGSLQERRLYED-LMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEK 65
Query: 213 ESTVRIQADLQMNWIDKRLTWNAGXVG 293
V + A L W D L W+ G
Sbjct: 66 NQVVYVNAWLDYTWNDYNLVWDKAEYG 92
>AF022973-6|AAC25796.1| 498|Caenorhabditis elegans Acetylcholine
receptor protein16, isoform a protein.
Length = 498
Score = 29.1 bits (62), Expect = 4.4
Identities = 23/87 (26%), Positives = 36/87 (41%), Gaps = 5/87 (5%)
Frame = +3
Query: 48 LLTCAIASAAECENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLRHA-----NXRES 212
L++CAI +A + L D L+ Y+ P + +T+HL+ A + E
Sbjct: 7 LISCAILAAPTLGSLQERRLYED-LMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEK 65
Query: 213 ESTVRIQADLQMNWIDKRLTWNAGXVG 293
V + A L W D L W+ G
Sbjct: 66 NQVVYVNAWLDYTWNDYNLVWDKAEYG 92
>Z67737-2|CAA91537.3| 400|Caenorhabditis elegans Hypothetical
protein T01H10.2 protein.
Length = 400
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = +3
Query: 132 YDRDSPPDSKIVVNLTLHLRHANXRESESTVRIQADLQMNWIDKRLTWNA 281
YD D+P + L L+ E V + ++ W D RL+WNA
Sbjct: 64 YDPDAPKRYNYSIML-YSLKLVEVNEPAEKVAVVMEIMEYWYDIRLSWNA 112
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,282,276
Number of Sequences: 27780
Number of extensions: 190856
Number of successful extensions: 533
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 508
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 533
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -