Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_FL5_L22
(833 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 203 2e-52
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 186 4e-47
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 185 6e-47
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 182 5e-46
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 177 1e-44
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 177 1e-44
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 177 1e-44
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 177 2e-44
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 173 2e-43
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 173 2e-43
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 173 2e-43
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 173 2e-43
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 173 2e-43
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 171 8e-43
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 171 8e-43
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 171 8e-43
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 171 8e-43
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 169 5e-42
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 166 3e-41
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 158 8e-39
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 146 3e-35
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 141 1e-33
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 105 7e-23
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 93 3e-19
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 74 3e-13
X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein ( Dros... 39 0.007
AY071740-1|AAL49362.1| 184|Drosophila melanogaster RH47344p pro... 39 0.010
AY119533-1|AAM50187.1| 1058|Drosophila melanogaster GH18077p pro... 34 0.28
AE014134-2086|AAF53112.4| 1058|Drosophila melanogaster CG6614-PA... 34 0.28
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 203 bits (496), Expect = 2e-52
Identities = 108/239 (45%), Positives = 146/239 (61%), Gaps = 8/239 (3%)
Frame = +3
Query: 9 KKAPGSDGIRNRALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPNNET 188
KK+PG D + N LK LPV+ I LA I NA + FP WK A ++ IHKPGKP
Sbjct: 452 KKSPGIDNVCNATLKALPVRAILYLALIYNAILRVQFFPKQWKMAAILMIHKPGKPEESP 511
Query: 189 ASYRPISLLPAIGKIYERLLRKRLWDFVTANKILIDEQFGFRAKHSCVQQVHRLTEHILI 368
SYRPISLL ++ K++ERL+ RL D +T +IL D QFGFR HS V+QVHRLT+HIL
Sbjct: 512 ESYRPISLLSSLSKLWERLIANRLNDIMTERRILPDHQFGFRQGHSTVEQVHRLTKHILQ 571
Query: 369 GLNRRKQIPTGALFFDVAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVE 548
+ ++ A+F D+ +AFD+VWH+GLI K+ + P +++ +L +R F RV
Sbjct: 572 AFDDKEY--CNAVFIDMQQAFDRVWHDGLISKVKKL-FPAPYYGVLKSYLEDRRFMVRVR 628
Query: 549 GTRSRPRHLTAGVPQGSALSPLLFSLYINDIPGSPETH--------LXLFADDTXIYYS 701
+ S PR + AGVPQGS L PLL+S++ D+P H L +ADD + YS
Sbjct: 629 NSYSIPRVMRAGVPQGSVLGPLLYSVFTADLPCPNAYHMADPRKALLATYADDIALLYS 687
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 186 bits (452), Expect = 4e-47
Identities = 98/236 (41%), Positives = 139/236 (58%), Gaps = 8/236 (3%)
Frame = +3
Query: 9 KKAPGSDGIRNRALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPNNET 188
KKAPG D + NR ++LLP Q + L I N+ + FP WK A +I IHK GK +
Sbjct: 255 KKAPGEDLLDNRTIRLLPDQALQFLVLIFNSVLDVGYFPKAWKSASIIMIHKTGKTPTDV 314
Query: 189 ASYRPISLLPAIGKIYERLLRKRLWDFVTANKILIDEQFGFRAKHSCVQQVHRLTEHILI 368
SYRPISLLP++GKI ERL+ RL K + QFGFR +H +Q+HR+ L
Sbjct: 315 DSYRPISLLPSLGKIMERLILNRLLTCKDVTKAIPKFQFGFRLQHGTPEQLHRVVNFALE 374
Query: 369 GLNRRKQIPTGALFFDVAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVE 548
+ K+ GA F D+ +AFD+VWH GL+YK + P +L L+++ FL R+F V+
Sbjct: 375 AM-ENKEYAVGA-FLDIQQAFDRVWHPGLLYKAKRL-FPPQLYLVVKSFLEERTFHVSVD 431
Query: 549 GTRSRPRHLTAGVPQGSALSPLLFSLYINDIP-GSPETH-------LXLFADDTXI 692
G +S + + AGVPQGS L P L+S++ +D+P +P T + +ADDT +
Sbjct: 432 GYKSSIKPIAAGVPQGSVLGPTLYSVFASDMPTHTPVTEVDEEDVLIATYADDTAV 487
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 185 bits (451), Expect = 6e-47
Identities = 98/236 (41%), Positives = 139/236 (58%), Gaps = 8/236 (3%)
Frame = +3
Query: 9 KKAPGSDGIRNRALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPNNET 188
KKAPG D + NR ++LLP Q + LA I N+ + FP WK A +I IHK GK +
Sbjct: 453 KKAPGEDLLDNRTIRLLPDQALQFLALIFNSVLDVGYFPKAWKSASIIMIHKTGKTPTDV 512
Query: 189 ASYRPISLLPAIGKIYERLLRKRLWDFVTANKILIDEQFGFRAKHSCVQQVHRLTEHILI 368
SYRP SLLP++GKI ERL+ RL K + QFGFR +H +Q+HR+ L
Sbjct: 513 DSYRPTSLLPSLGKIMERLILNRLLTCKDVTKAIPKFQFGFRLQHGTPEQLHRVVNFALE 572
Query: 369 GLNRRKQIPTGALFFDVAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVE 548
+ K+ GA F D+ +AFD+VWH GL+YK + P +L L+++ FL R+F V+
Sbjct: 573 AM-ENKEYAVGA-FLDIQQAFDRVWHPGLLYKAKRL-FPPQLYLVVKSFLEERTFHVSVD 629
Query: 549 GTRSRPRHLTAGVPQGSALSPLLFSLYINDIP-GSPETH-------LXLFADDTXI 692
G +S + + AGVPQGS L P L+S++ +D+P +P T + +ADDT +
Sbjct: 630 GYKSSIKPIAAGVPQGSVLGPTLYSVFASDMPTHTPVTEVDEEDVLIATYADDTAV 685
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown protein.
Length = 908
Score = 182 bits (443), Expect = 5e-46
Identities = 99/237 (41%), Positives = 134/237 (56%), Gaps = 5/237 (2%)
Frame = +3
Query: 12 KAPGSDGIRNRALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPNNETA 191
KAPG D I N LK LP Q I + + NA + FP WK + IHKPGKP E A
Sbjct: 452 KAPGHDVICNATLKALPRQAILYITLVFNAIVRLQYFPYQWKLGIISMIHKPGKPEREPA 511
Query: 192 SYRPISLLPAIGKIYERLLRKRLWDFVTANKILIDEQFGFRAKHSCVQQVHRLTEHILIG 371
SYRPISLLP+I K++ERL+ R+ + A I + QFGFRA H V+Q+HR+ E IL
Sbjct: 512 SYRPISLLPSISKVFERLIAVRIVSIMEAQGITPEHQFGFRAGHCTVEQLHRVVEQILTA 571
Query: 372 LNRRKQIPTGALFFDVAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVEG 551
+ ++ +LF D+ +AFD+VWH GL K+ +P +++ +L R F R
Sbjct: 572 YDSKEY--CNSLFLDIREAFDRVWHIGLQLKI-KQTLPAPYFGLLKSYLEGRRFAVRFHS 628
Query: 552 TRSRPRHLTAGVPQGSALSPLLFSLYINDIPGSP-----ETHLXLFADDTXIYYSCR 707
S ++ AGVPQGS L PLL+ LY +D+P ++ L FADD + Y R
Sbjct: 629 AISTEHNVAAGVPQGSVLGPLLYCLYSHDMPQPDVSLYGKSMLATFADDVCVTYRSR 685
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 177 bits (432), Expect = 1e-44
Identities = 101/239 (42%), Positives = 141/239 (58%), Gaps = 9/239 (3%)
Frame = +3
Query: 12 KAPGSDGIRNRALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPNNETA 191
KAPG D I N+ +K LP + L I N+ + +P WK A V I KPGK NE
Sbjct: 497 KAPGKDLITNQLIKTLPTKATLYLILIYNSILRLGYYPEAWKHAQVKMILKPGKSANEPR 556
Query: 192 SYRPISLLPAIGKIYERLLRKRLWDFVTANKILIDEQFGFRAKHSCVQQVHRLTEHILIG 371
SYRPISLL + KI+ERLL KRL+ K + QFGFR +H QQ+ R+T+ IL
Sbjct: 557 SYRPISLLSGLSKIFERLLLKRLFKVDLFKKAIPLHQFGFRKEHGSEQQIARVTQFILEA 616
Query: 372 LNRRKQIPTGALFFDVAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVE- 548
R++ A+F D+++AFD+VWH GL+ KL + +P L +I+ +L+NR+F + +
Sbjct: 617 FERKEY--CSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQA 673
Query: 549 GTRSRPRHLTAGVPQGSALSPLLFSLYINDIP------GSPETHLXL--FADDTXIYYS 701
G SR + AGVPQGS L PLL+S++ +D+P SP + L +ADDT + S
Sbjct: 674 GETSRTGQIGAGVPQGSNLGPLLYSIFSSDMPLPYIYRPSPTERIMLSTYADDTIVLSS 732
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 177 bits (432), Expect = 1e-44
Identities = 91/229 (39%), Positives = 135/229 (58%)
Frame = +3
Query: 9 KKAPGSDGIRNRALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPNNET 188
+K+PG DGI N +LK LP I + I N + FP WK A ++ I KPGKP +
Sbjct: 476 RKSPGIDGIPNISLKNLPTSAINHIVNIANHCLQAGYFPRDWKIAKIVPILKPGKPPDNP 535
Query: 189 ASYRPISLLPAIGKIYERLLRKRLWDFVTANKILIDEQFGFRAKHSCVQQVHRLTEHILI 368
SYRPISLL + KI E+L++ RL F+ + L Q+GFR + + +L +I
Sbjct: 536 ESYRPISLLSGLSKILEKLIKLRLVKFLDIHNTLPTVQYGFRNGLNTILPTLKLRNYIKE 595
Query: 369 GLNRRKQIPTGALFFDVAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVE 548
+ ++ + G + D+ AFD VWH+GL++KL +G P L+ I+++FL++R F +
Sbjct: 596 SIQSKQSV--GLVTLDIEAAFDTVWHDGLLHKLKMIGTPIYLIKIVQNFLTHRYFSVNLN 653
Query: 549 GTRSRPRHLTAGVPQGSALSPLLFSLYINDIPGSPETHLXLFADDTXIY 695
++S R L AGVPQGS L P LF+++ +DIP + L LFADD +Y
Sbjct: 654 SSQSARRILNAGVPQGSVLGPTLFNIFTHDIPQATNCVLSLFADDAAVY 702
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 177 bits (432), Expect = 1e-44
Identities = 91/229 (39%), Positives = 135/229 (58%)
Frame = +3
Query: 9 KKAPGSDGIRNRALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPNNET 188
+K+PG DGI N +LK LP I + I N + FP WK A ++ I KPGKP +
Sbjct: 424 RKSPGIDGIPNISLKNLPTSAINHIVNIANHCLQAGYFPRDWKIAKIVPILKPGKPPDNP 483
Query: 189 ASYRPISLLPAIGKIYERLLRKRLWDFVTANKILIDEQFGFRAKHSCVQQVHRLTEHILI 368
SYRPISLL + KI E+L++ RL F+ + L Q+GFR + + +L +I
Sbjct: 484 ESYRPISLLSGLSKILEKLIKLRLVKFLDIHNTLPTVQYGFRNGLNTILPTLKLRNYIKE 543
Query: 369 GLNRRKQIPTGALFFDVAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVE 548
+ ++ + G + D+ AFD VWH+GL++KL +G P L+ I+++FL++R F +
Sbjct: 544 SIQSKQSV--GLVTLDIEAAFDTVWHDGLLHKLKMIGTPIYLIKIVQNFLTHRYFSVNLN 601
Query: 549 GTRSRPRHLTAGVPQGSALSPLLFSLYINDIPGSPETHLXLFADDTXIY 695
++S R L AGVPQGS L P LF+++ +DIP + L LFADD +Y
Sbjct: 602 SSQSARRILNAGVPQGSVLGPTLFNIFTHDIPQATNCVLSLFADDAAVY 650
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 177 bits (431), Expect = 2e-44
Identities = 100/239 (41%), Positives = 142/239 (59%), Gaps = 9/239 (3%)
Frame = +3
Query: 12 KAPGSDGIRNRALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPNNETA 191
KAPG D I N+ +K LP + L I N+ + +P WK A V I KPGK +NE
Sbjct: 509 KAPGKDLITNQLIKTLPTKATLYLILIYNSILRLGYYPEAWKHAQVKMILKPGKSSNEPK 568
Query: 192 SYRPISLLPAIGKIYERLLRKRLWDFVTANKILIDEQFGFRAKHSCVQQVHRLTEHILIG 371
SYRPISLL + K++ERLL KRL+ K + QFGFR +H QQ+ R+T+ IL
Sbjct: 569 SYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEA 628
Query: 372 LNRRKQIPTGALFFDVAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVE- 548
R++ A+F D+++AFD+VWH GL+ KL + +P L +I+ +L+NR+F + +
Sbjct: 629 FERKEY--CSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQA 685
Query: 549 GTRSRPRHLTAGVPQGSALSPLLFSLYINDIP------GSPETHLXL--FADDTXIYYS 701
G SR + AGVPQGS L PLL+S++ +D+P SP + L +ADDT + S
Sbjct: 686 GETSRTGQIGAGVPQGSNLGPLLYSIFSSDMPLPYIYRPSPTQRIMLSTYADDTIVLSS 744
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial cds.
).
Length = 964
Score = 173 bits (421), Expect = 2e-43
Identities = 98/239 (41%), Positives = 141/239 (58%), Gaps = 9/239 (3%)
Frame = +3
Query: 12 KAPGSDGIRNRALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPNNETA 191
KAPG D I N+ +K LP + L I N+ + +P WK A V I KPGK N+
Sbjct: 381 KAPGKDLITNQLIKTLPTKATLYLILIYNSILRIGYYPDAWKHAQVKMILKPGKSVNDPK 440
Query: 192 SYRPISLLPAIGKIYERLLRKRLWDFVTANKILIDEQFGFRAKHSCVQQVHRLTEHILIG 371
SYRPISLL + K++ERLL KRL+ K + QFGFR +H QQ+ R+T+ IL
Sbjct: 441 SYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEA 500
Query: 372 LNRRKQIPTGALFFDVAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVE- 548
R++ A+F D+++AFD+VWH GL+ KL + +P L +I+ +L+NR+F + +
Sbjct: 501 FERKEY--CSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQA 557
Query: 549 GTRSRPRHLTAGVPQGSALSPLLFSLYINDIP------GSPETHLXL--FADDTXIYYS 701
G SR + AGVPQGS L P+L+S++ +D+P SP + L +ADDT + S
Sbjct: 558 GETSRAGQIGAGVPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSS 616
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 173 bits (421), Expect = 2e-43
Identities = 98/239 (41%), Positives = 141/239 (58%), Gaps = 9/239 (3%)
Frame = +3
Query: 12 KAPGSDGIRNRALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPNNETA 191
KAPG D I N+ +K LP + L I N+ + +P WK A V I KPGK N+
Sbjct: 497 KAPGKDLITNQLIKTLPTKATLYLILIYNSILRIGYYPDAWKHAQVKMILKPGKSVNDPK 556
Query: 192 SYRPISLLPAIGKIYERLLRKRLWDFVTANKILIDEQFGFRAKHSCVQQVHRLTEHILIG 371
SYRPISLL + K++ERLL KRL+ K + QFGFR +H QQ+ R+T+ IL
Sbjct: 557 SYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEA 616
Query: 372 LNRRKQIPTGALFFDVAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVE- 548
R++ A+F D+++AFD+VWH GL+ KL + +P L +I+ +L+NR+F + +
Sbjct: 617 FERKEY--CSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQA 673
Query: 549 GTRSRPRHLTAGVPQGSALSPLLFSLYINDIP------GSPETHLXL--FADDTXIYYS 701
G SR + AGVPQGS L P+L+S++ +D+P SP + L +ADDT + S
Sbjct: 674 GETSRAGQIGAGVPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSS 732
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 173 bits (421), Expect = 2e-43
Identities = 98/239 (41%), Positives = 141/239 (58%), Gaps = 9/239 (3%)
Frame = +3
Query: 12 KAPGSDGIRNRALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPNNETA 191
KAPG D I N+ +K LP + L I N+ + +P WK A V I KPGK N+
Sbjct: 497 KAPGKDLITNQLIKALPTKATLYLILIYNSILRIGYYPDAWKHAQVKMILKPGKSVNDPK 556
Query: 192 SYRPISLLPAIGKIYERLLRKRLWDFVTANKILIDEQFGFRAKHSCVQQVHRLTEHILIG 371
SYRPISLL + K++ERLL KRL+ K + QFGFR +H QQ+ R+T+ IL
Sbjct: 557 SYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEA 616
Query: 372 LNRRKQIPTGALFFDVAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVE- 548
R++ A+F D+++AFD+VWH GL+ KL + +P L +I+ +L+NR+F + +
Sbjct: 617 FERKEY--CSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQA 673
Query: 549 GTRSRPRHLTAGVPQGSALSPLLFSLYINDIP------GSPETHLXL--FADDTXIYYS 701
G SR + AGVPQGS L P+L+S++ +D+P SP + L +ADDT + S
Sbjct: 674 GETSRAGQIGAGVPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSS 732
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 173 bits (421), Expect = 2e-43
Identities = 98/239 (41%), Positives = 141/239 (58%), Gaps = 9/239 (3%)
Frame = +3
Query: 12 KAPGSDGIRNRALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPNNETA 191
KAPG D I N+ +K LP + L I N+ + +P WK A V I KPGK N+
Sbjct: 459 KAPGKDLITNQLIKTLPTKATLYLILIYNSILRIGYYPDAWKHAQVKMILKPGKSVNDPK 518
Query: 192 SYRPISLLPAIGKIYERLLRKRLWDFVTANKILIDEQFGFRAKHSCVQQVHRLTEHILIG 371
SYRPISLL + K++ERLL KRL+ K + QFGFR +H QQ+ R+T+ IL
Sbjct: 519 SYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEA 578
Query: 372 LNRRKQIPTGALFFDVAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVE- 548
R++ A+F D+++AFD+VWH GL+ KL + +P L +I+ +L+NR+F + +
Sbjct: 579 FERKEY--CSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQA 635
Query: 549 GTRSRPRHLTAGVPQGSALSPLLFSLYINDIP------GSPETHLXL--FADDTXIYYS 701
G SR + AGVPQGS L P+L+S++ +D+P SP + L +ADDT + S
Sbjct: 636 GETSRAGQIGAGVPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSS 694
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 173 bits (421), Expect = 2e-43
Identities = 98/239 (41%), Positives = 141/239 (58%), Gaps = 9/239 (3%)
Frame = +3
Query: 12 KAPGSDGIRNRALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPNNETA 191
KAPG D I N+ +K LP + L I N+ + +P WK A V I KPGK N+
Sbjct: 497 KAPGKDLITNQLIKTLPTKATLYLILIYNSILRIGYYPDAWKHAQVKMILKPGKSVNDPK 556
Query: 192 SYRPISLLPAIGKIYERLLRKRLWDFVTANKILIDEQFGFRAKHSCVQQVHRLTEHILIG 371
SYRPISLL + K++ERLL KRL+ K + QFGFR +H QQ+ R+T+ IL
Sbjct: 557 SYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEA 616
Query: 372 LNRRKQIPTGALFFDVAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVE- 548
R++ A+F D+++AFD+VWH GL+ KL + +P L +I+ +L+NR+F + +
Sbjct: 617 FERKEY--CSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQA 673
Query: 549 GTRSRPRHLTAGVPQGSALSPLLFSLYINDIP------GSPETHLXL--FADDTXIYYS 701
G SR + AGVPQGS L P+L+S++ +D+P SP + L +ADDT + S
Sbjct: 674 GETSRAGQIGAGVPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSS 732
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 171 bits (417), Expect = 8e-43
Identities = 90/213 (42%), Positives = 129/213 (60%), Gaps = 1/213 (0%)
Frame = +3
Query: 9 KKAPGSDGIRNRALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPNNET 188
KKAPG+D + N+ + LP + L I N + FP WK A + I KPGK
Sbjct: 52 KKAPGTDNLNNKTIINLPTKARIYLILIYNNILRTGHFPNKWKHASISMIPKPGKSPFAL 111
Query: 189 ASYRPISLLPAIGKIYERLLRKRLWDFVTANKILIDEQFGFRAKHSCVQQVHRLTEHILI 368
SYRPISLL + K+ ER+L KRL+D + K + QFGFR H Q+ R+T+ IL
Sbjct: 112 NSYRPISLLSGLSKLLERILLKRLYDIDSFAKAIPSHQFGFRKDHGAEHQLARVTQFILK 171
Query: 369 GLNRRKQIPTGALFFDVAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVE 548
+ + A F D+ +AFD+VWH+GL+YKL + +P L ++ ++LSNR+F R++
Sbjct: 172 AFDEKD--VCSATFLDITEAFDRVWHDGLLYKLSRL-IPRYLFDLLENYLSNRTFSVRID 228
Query: 549 G-TRSRPRHLTAGVPQGSALSPLLFSLYINDIP 644
G T SR ++ AGVPQGS L P+L+S+Y +D+P
Sbjct: 229 GETTSRIGNIRAGVPQGSILGPVLYSIYSSDMP 261
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 171 bits (417), Expect = 8e-43
Identities = 90/213 (42%), Positives = 129/213 (60%), Gaps = 1/213 (0%)
Frame = +3
Query: 9 KKAPGSDGIRNRALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPNNET 188
KKAPG+D + N+ + LP + L I N + FP WK A + I KPGK
Sbjct: 499 KKAPGTDNLNNKTIINLPTKARIYLILIYNNILRTGHFPNKWKHASISMIPKPGKSPFAL 558
Query: 189 ASYRPISLLPAIGKIYERLLRKRLWDFVTANKILIDEQFGFRAKHSCVQQVHRLTEHILI 368
SYRPISLL + K+ ER+L KRL+D + K + QFGFR H Q+ R+T+ IL
Sbjct: 559 NSYRPISLLSGLSKLLERILPKRLYDIDSFAKAIPSHQFGFRKDHGAEHQLARVTQFILK 618
Query: 369 GLNRRKQIPTGALFFDVAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVE 548
+ + A F D+ +AFD+VWH+GL+YKL + +P L ++ ++LSNR+F R++
Sbjct: 619 AFDEKD--VCSATFLDITEAFDRVWHDGLLYKLSRL-IPRYLFDLLENYLSNRTFSVRID 675
Query: 549 G-TRSRPRHLTAGVPQGSALSPLLFSLYINDIP 644
G T SR ++ AGVPQGS L P+L+S+Y +D+P
Sbjct: 676 GETTSRIGNIRAGVPQGSILGPVLYSIYSSDMP 708
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 171 bits (417), Expect = 8e-43
Identities = 90/213 (42%), Positives = 129/213 (60%), Gaps = 1/213 (0%)
Frame = +3
Query: 9 KKAPGSDGIRNRALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPNNET 188
KKAPG+D + N+ + LP + L I N + FP WK A + I KPGK
Sbjct: 499 KKAPGTDNLNNKTIINLPTKARIYLILIYNNILRTGHFPNKWKHASISMIPKPGKSPFAL 558
Query: 189 ASYRPISLLPAIGKIYERLLRKRLWDFVTANKILIDEQFGFRAKHSCVQQVHRLTEHILI 368
SYRPISLL + K+ ER+L KRL+D + K + QFGFR H Q+ R+T+ IL
Sbjct: 559 NSYRPISLLSGLSKLLERILLKRLYDIDSFAKAIPSHQFGFRKDHGAEHQLARVTQFILK 618
Query: 369 GLNRRKQIPTGALFFDVAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVE 548
+ + A F D+ +AFD+VWH+GL+YKL + +P L ++ ++LSNR+F R++
Sbjct: 619 AFDEKD--VCSATFLDITEAFDRVWHDGLLYKLSRL-IPRYLFDLLENYLSNRTFSVRID 675
Query: 549 G-TRSRPRHLTAGVPQGSALSPLLFSLYINDIP 644
G T SR ++ AGVPQGS L P+L+S+Y +D+P
Sbjct: 676 GETTSRIGNIRAGVPQGSILGPVLYSIYSSDMP 708
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 171 bits (417), Expect = 8e-43
Identities = 90/213 (42%), Positives = 129/213 (60%), Gaps = 1/213 (0%)
Frame = +3
Query: 9 KKAPGSDGIRNRALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPNNET 188
KKAPG+D + N+ + LP + L I N + FP WK A + I KPGK
Sbjct: 499 KKAPGTDNLNNKTIINLPTKARIYLILIYNNILRTGHFPNKWKHASISMIPKPGKSPFAL 558
Query: 189 ASYRPISLLPAIGKIYERLLRKRLWDFVTANKILIDEQFGFRAKHSCVQQVHRLTEHILI 368
SYRPISLL + K+ ER+L KRL+D + K + QFGFR H Q+ R+T+ IL
Sbjct: 559 NSYRPISLLSGLSKLLERILLKRLYDIDSFAKAIPSHQFGFRKDHGAEHQLARVTQFILK 618
Query: 369 GLNRRKQIPTGALFFDVAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVE 548
+ + A F D+ +AFD+VWH+GL+YKL + +P L ++ ++LSNR+F R++
Sbjct: 619 AFDEKD--VCSATFLDITEAFDRVWHDGLLYKLSRL-IPRYLFDLLENYLSNRTFSVRID 675
Query: 549 G-TRSRPRHLTAGVPQGSALSPLLFSLYINDIP 644
G T SR ++ AGVPQGS L P+L+S+Y +D+P
Sbjct: 676 GETTSRIGNIRAGVPQGSILGPVLYSIYSSDMP 708
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 169 bits (410), Expect = 5e-42
Identities = 89/228 (39%), Positives = 130/228 (57%)
Frame = +3
Query: 9 KKAPGSDGIRNRALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPNNET 188
+K+PG D I R L LP I + + NA FP WK++ ++ I KPGK +
Sbjct: 447 RKSPGYDLITPRMLIELPKCAILHICLLFNAIAKLGYFPQKWKKSTIVMIPKPGKDKTQP 506
Query: 189 ASYRPISLLPAIGKIYERLLRKRLWDFVTANKILIDEQFGFRAKHSCVQQVHRLTEHILI 368
+SYRPISLL + K++E++L R+ + N L QFGFR KH ++QV+R+T I
Sbjct: 507 SSYRPISLLTCLSKLFEKMLLLRISPHLRINNTLPTHQFGFREKHGTIEQVNRITSEIRT 566
Query: 369 GLNRRKQIPTGALFFDVAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVE 548
R+ A+F DVA+AFD+VW +GL++K+ + +P +++ +L NR F R +
Sbjct: 567 AFEHREYCT--AIFLDVAQAFDRVWLDGLLFKIIKL-LPQNTHKLLKSYLYNRVFAIRCD 623
Query: 549 GTRSRPRHLTAGVPQGSALSPLLFSLYINDIPGSPETHLXLFADDTXI 692
+ SR + AGVPQGS L P+L++LY D P FADDT I
Sbjct: 624 TSTSRDCAIEAGVPQGSVLGPILYTLYTADFPIDYNLTTSTFADDTAI 671
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p protein.
Length = 888
Score = 166 bits (404), Expect = 3e-41
Identities = 88/228 (38%), Positives = 129/228 (56%)
Frame = +3
Query: 9 KKAPGSDGIRNRALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPNNET 188
+K+PG D I R L LP I + + NA FP WK++ ++ I KPGK +
Sbjct: 447 RKSPGYDLITPRMLIELPKCAILHICLLFNAIAKLGYFPQKWKKSTIVMIPKPGKDKTQP 506
Query: 189 ASYRPISLLPAIGKIYERLLRKRLWDFVTANKILIDEQFGFRAKHSCVQQVHRLTEHILI 368
+SYRPISLL + K++E++L R+ + N L QFGFR KH ++QV+R+T I
Sbjct: 507 SSYRPISLLTCLSKLFEKMLLLRISPHLRINNTLPTHQFGFREKHGTIEQVNRITSEIRT 566
Query: 369 GLNRRKQIPTGALFFDVAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVE 548
R+ A+F DVA+AFD+VW +GL++K+ + +P +++ +L N F R +
Sbjct: 567 AFEHREYCT--AIFLDVAQAFDRVWLDGLLFKIIKL-LPQNTHKLLKSYLYNTVFAIRCD 623
Query: 549 GTRSRPRHLTAGVPQGSALSPLLFSLYINDIPGSPETHLXLFADDTXI 692
+ SR + AGVPQGS L P+L++LY D P FADDT I
Sbjct: 624 TSTSRDCAIEAGVPQGSVLGPILYTLYTADFPIDYNLTTSTFADDTAI 671
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding protein,
3' end. ).
Length = 858
Score = 158 bits (384), Expect = 8e-39
Identities = 87/228 (38%), Positives = 125/228 (54%)
Frame = +3
Query: 9 KKAPGSDGIRNRALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPNNET 188
KK+PG D I + LP + + + NA FP WK +I I KPGK +
Sbjct: 449 KKSPGYDLITPEMIIQLPHSAVRYITKLFNAITKLGYFPQRWKMMKIIMIPKPGKNHTVA 508
Query: 189 ASYRPISLLPAIGKIYERLLRKRLWDFVTANKILIDEQFGFRAKHSCVQQVHRLTEHILI 368
+SYRPISLL I K++E+ L RL T + I+ QFGFR H ++QV+R+T I
Sbjct: 509 SSYRPISLLSCISKLFEKCLLIRLNQHQTYHNIIPAHQFGFRESHGTIEQVNRITTEIRT 568
Query: 369 GLNRRKQIPTGALFFDVAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVE 548
R+ A+F DV++AFDKVW +GL++K+ + +P+ +++ +L +R F R
Sbjct: 569 AFEYREYCT--AVFLDVSQAFDKVWLDGLMFKI-KISLPESTHKLLKSYLYDRKFAVRCN 625
Query: 549 GTRSRPRHLTAGVPQGSALSPLLFSLYINDIPGSPETHLXLFADDTXI 692
S + AGVPQGS L P L+ +Y DIP + + FADDT I
Sbjct: 626 TATSTVHTIEAGVPQGSVLGPTLYLIYTADIPTNSRLTVSTFADDTAI 673
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 146 bits (354), Expect = 3e-35
Identities = 79/212 (37%), Positives = 120/212 (56%)
Frame = +3
Query: 57 LPVQLITMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPNNETASYRPISLLPAIGKIY 236
LP+ + + + NA FP WK++ +I I KP K + SYRPISLL + K++
Sbjct: 5 LPMCAVMRICLLFNAITKIGYFPQKWKKSIIIMIPKPEKDKTQP-SYRPISLLTCLSKLF 63
Query: 237 ERLLRKRLWDFVTANKILIDEQFGFRAKHSCVQQVHRLTEHILIGLNRRKQIPTGALFFD 416
E+ L R+ + + L QF F AKH ++QV+R+T I R+ ALF D
Sbjct: 64 EKGLLLRISPHLKTHNTLPSYQFDFPAKHGAIEQVNRITTEIRTAFEHREYCT--ALFLD 121
Query: 417 VAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVEGTRSRPRHLTAGVPQG 596
VA+AFD+VW +GL++K+ + +P + +++ +L R F R + S + AGVPQG
Sbjct: 122 VAQAFDRVWLDGLMFKIIQL-LPQNIHKLLKSYLDKRVFAVRCSSSTSSDFTIEAGVPQG 180
Query: 597 SALSPLLFSLYINDIPGSPETHLXLFADDTXI 692
S L P+L++LY DIP + + + FADDT I
Sbjct: 181 SVLGPILYTLYTADIPTNYQLTIFTFADDTAI 212
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 141 bits (341), Expect = 1e-33
Identities = 80/239 (33%), Positives = 127/239 (53%), Gaps = 4/239 (1%)
Frame = +3
Query: 12 KAPGSDGIRNRALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPNNETA 191
K+PG+D + LK L L T L I N +T +P W+ A +I I KP KP ++
Sbjct: 452 KSPGADRVSYPMLKNLSPHLKTKLLDIFNQILTTGKYPHTWRSAIIIPISKPNKPPSDIN 511
Query: 192 SYRPISLLPAIGKIYERLLRKRLWDFVTANKILIDEQFGFRAKHSCVQQVHRLTEHILIG 371
SYRPISLL +GK E+++ +RL F+ + ++ Q F++ HS + + R+
Sbjct: 512 SYRPISLLSCLGKTLEKIIAQRLTWFIKRHNLISHNQVAFKSNHSTMDALLRIQHFASNA 571
Query: 372 LNRRKQIPTGALFFDVAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVEG 551
L+ + + L D +AFD+V + ++ +L G+ RL +I+ F++NRSFR R+
Sbjct: 572 LSTKNHV--SILATDFERAFDRVGIHAVLCRLERWGIGPRLYNLIKAFMTNRSFRVRINN 629
Query: 552 TRSRPRHLTAGVPQGSALSPLLFSLYINDIPGSPETH----LXLFADDTXIYYSCRKMS 716
S L G+PQGS LS +LF + I DI H + L+ADD I+ + ++
Sbjct: 630 VTSNSHILHNGIPQGSPLSVVLFMIAIEDINDIVTRHKDIYISLYADDAIIFTKIKNIN 688
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 105 bits (252), Expect = 7e-23
Identities = 69/236 (29%), Positives = 116/236 (49%), Gaps = 4/236 (1%)
Frame = +3
Query: 15 APGSDGIRNRALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPNNETAS 194
APG + I + +K + + N I P +K + +I I KP +T+S
Sbjct: 449 APGLNRISYQMIKNSSHTTKNRITKLFNEIFNSHI-PQAYKTSLIIPILKPNTDKTKTSS 507
Query: 195 YRPISLLPAIGKIYERLLRKRLWDFVTANKILIDEQFGFRAKHSCVQQVHRLTEHILIGL 374
YRPISL I KI ++++ KRLW VT N ++ D+QFGF+ K ++++
Sbjct: 508 YRPISLNCCIAKILDKIIAKRLWWLVTYNNLINDKQFGFK-KGKSTSDCLLYVDYLI--- 563
Query: 375 NRRKQIPTGALFFDVAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVEGT 554
+ ++ T + D ++AFD+V + +I +L +++ I++F+SNR RV
Sbjct: 564 -TKSKMHTSLVTLDFSRAFDRVGVHSIIQQLQEWKTGPKIIKYIKNFMSNRKITVRVGPH 622
Query: 555 RSRPRHLTAGVPQGSALSPLLFSLYINDIPGSPETHLXL----FADDTXIYYSCRK 710
S P L G+PQGS +S +LF + N + H + +ADD + + K
Sbjct: 623 TSSPLPLFNGIPQGSPISVILFLIAFNKLSNIISLHKEIKFNAYADDFFLIINFNK 678
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 93.5 bits (222), Expect = 3e-19
Identities = 68/236 (28%), Positives = 111/236 (47%), Gaps = 9/236 (3%)
Frame = +3
Query: 12 KAPGSDGIRNRALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPNNETA 191
KAPG DGI +K + + +FP WK+ ++ + K P N
Sbjct: 418 KAPGIDGIPGVIVKAAATARPEVFRDTFQQCLLDGVFPKRWKKMKLVLLLKGKGPANVPR 477
Query: 192 SYRPISLLPAIGKIYERLLRKRLWDFVTANKILIDEQFGFRAKHSCVQQVHRLTEHILIG 371
SYRP+ LL +GK++ER+L R+ + L +Q+GFR S + + +T+
Sbjct: 478 SYRPLCLLDIVGKLFERILYARIELITESPTGLQGQQYGFRKGKSTLDALKSVTDAARKA 537
Query: 372 LNRRKQIP-----TGALFFDVAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFR 536
L+ + + + DV AF+ ++ + N+GVPD + +I ++ +R
Sbjct: 538 LDGNRWLGGSKKYCAIITLDVKNAFNTARWPIILGAMRNLGVPDYIRGVIGNYFRDRVLW 597
Query: 537 YRVE-GTRSRPRHLTAGVPQGSALSPLLFSLYINDIPGSPE---THLXLFADDTXI 692
Y E G RS ++AGVPQGS L P+L+++ + I + L FADD I
Sbjct: 598 YVTEDGPRS--HQVSAGVPQGSVLGPILWNIMYDGILSISKPRGVELHCFADDVAI 651
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 73.7 bits (173), Expect = 3e-13
Identities = 66/230 (28%), Positives = 105/230 (45%), Gaps = 4/230 (1%)
Frame = +3
Query: 6 AKKAPGSDGIRNRALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIGIHK-PGKPNN 182
++++PG DGI K + + LA++ + + FPA WK V+ + K P K
Sbjct: 448 SRRSPGLDGINGTICKAVWRAIPEHLASLFSRCIRLGYFPAEWKCPRVVSLLKGPDKDKC 507
Query: 183 ETASYRPISLLPAIGKIYERLLRKRLWDFVTANKILIDEQFGFRAKHSCVQQVHRLTEHI 362
E +SYR I LLP GK+ E ++ R+ + + QFGFR + CV+ R H+
Sbjct: 508 EPSSYRGICLLPVFGKVLEAIMVNRVREVLPEG---CRWQFGFR-QGRCVEDAWR---HV 560
Query: 363 LIGLNRRKQIPTGALFFDVAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYR 542
+ F D AFD V + + +L ++G R + + + F S R R
Sbjct: 561 KSSVGASAAQYVLGTFVDFKGAFDNVEWSAALSRLADLGC--REMGLWQSFFSGRRAVIR 618
Query: 543 -VEGTRSRPRHLTAGVPQGSALSPLLFSLYINDIPG--SPETHLXLFADD 683
GT P +T G PQGS P ++ + ++ + P L +ADD
Sbjct: 619 SSSGTVEVP--VTRGCPQGSISGPFIWDILMDVLLQRLQPYCQLSAYADD 666
>X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type II retrotransposable
element R2Dm. ).
Length = 1057
Score = 39.1 bits (87), Expect = 0.007
Identities = 57/243 (23%), Positives = 94/243 (38%), Gaps = 12/243 (4%)
Frame = +3
Query: 15 APGSDGIRNRALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPNNETAS 194
+PG DGI ++ + +P + + I+N + P + A + I K
Sbjct: 359 SPGPDGITPKSAREVPSGI---MLRIMNLILWCGNLPHSIRLARTVFIPKTVTAKRPQ-D 414
Query: 195 YRPISLLPAIGKIYERLLRKRLWDFVTANKILIDEQFGFRAKHSCVQQVHRLTEHILIGL 374
+RPIS+ + + +L RL + + Q GF C T L+
Sbjct: 415 FRPISVPSVLVRQLNAILATRLNSSINWDP----RQRGFLPTDGCADNA---TIVDLVLR 467
Query: 375 NRRKQIPTGALF-FDVAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVEG 551
+ K + + DV+KAFD + H + L G P V +++ +G
Sbjct: 468 HSHKHFRSCYIANLDVSKAFDSLSHASIYDTLRAYGAPKGFVDYVQNTYEGGGTSLNGDG 527
Query: 552 TRSRPRHLTAGVPQGSALSPLLFSL----YINDIP-------GSPETHLXLFADDTXIYY 698
S GV QG LSP+LF+L + +P G+ T+ FADD ++
Sbjct: 528 WSSEEFVPARGVKQGDPLSPILFNLVMDRLLRTLPSEIGAKVGNAITNAAAFADDLVLFA 587
Query: 699 SCR 707
R
Sbjct: 588 ETR 590
>AY071740-1|AAL49362.1| 184|Drosophila melanogaster RH47344p
protein.
Length = 184
Score = 38.7 bits (86), Expect = 0.010
Identities = 29/78 (37%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Frame = +3
Query: 471 NMGVPDRLVLIIRDFLSNRSFRYRVEGTRSRPRH-LTAGVPQGSALSPLLFSLYINDIPG 647
N P LV IR + SNR E + RH +T GVPQGS L PLL++ + I
Sbjct: 14 NFSDPAYLVRFIRSYSSNRVLP--CESSEGVFRHQVTGGVPQGSVLGPLLWNTMYDGILR 71
Query: 648 SP---ETHLXLFADDTXI 692
P + + FADD +
Sbjct: 72 LPLVGRSEIVGFADDVAL 89
>AY119533-1|AAM50187.1| 1058|Drosophila melanogaster GH18077p
protein.
Length = 1058
Score = 33.9 bits (74), Expect = 0.28
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +2
Query: 23 LRRHPQPRVKTLTSPTDNNVGYHLKCCYDALHLSGGMERSR 145
L+R + + + PTDN+V LK CY LH++G +E SR
Sbjct: 853 LQRQIDDKFQIIKMPTDNSVYGKLKRCYQ-LHINGSVEYSR 892
>AE014134-2086|AAF53112.4| 1058|Drosophila melanogaster CG6614-PA
protein.
Length = 1058
Score = 33.9 bits (74), Expect = 0.28
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +2
Query: 23 LRRHPQPRVKTLTSPTDNNVGYHLKCCYDALHLSGGMERSR 145
L+R + + + PTDN+V LK CY LH++G +E SR
Sbjct: 853 LQRQIDDKFQIIKMPTDNSVYGKLKRCYQ-LHINGSVEYSR 892
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,903,664
Number of Sequences: 53049
Number of extensions: 850764
Number of successful extensions: 2037
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1893
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1986
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3962724636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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