Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_FL5_L22
(833 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical ... 123 2e-28
U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical pr... 89 5e-18
AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse trans... 81 1e-15
AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical ... 81 1e-15
U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical pr... 80 2e-15
AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical ... 61 1e-09
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ... 52 4e-07
AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical ... 42 7e-04
Z81586-9|CAB04699.2| 676|Caenorhabditis elegans Hypothetical pr... 36 0.027
AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical ... 36 0.027
U53344-5|AAA96226.2| 442|Caenorhabditis elegans More of ms prot... 30 2.3
AF013489-1|AAC47728.1| 442|Caenorhabditis elegans MOM-1 protein. 30 2.3
>AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical
protein R11E3.3 protein.
Length = 931
Score = 123 bits (296), Expect = 2e-28
Identities = 83/236 (35%), Positives = 124/236 (52%), Gaps = 3/236 (1%)
Frame = +3
Query: 15 APGSDGIRNRALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPNNETAS 194
A G DGI ++ LP+ + LA + N +++ I P WK+A+VI I KP K +S
Sbjct: 345 AIGPDGIAQIHIRKLPMCGYSFLAYLYNVSLSTNIIPDKWKKANVIMIPKPKKDPAIASS 404
Query: 195 YRPISLLPAIGKIYERLLRKRLWDFVTANKILIDEQFGFRAKHSCVQQVHRLTEHILIGL 374
YRPISLL I K+ E+ + KR+ + + + Q GF+ +HS V ++T I+ GL
Sbjct: 405 YRPISLLSPIAKLLEKAILKRIKNSIESPA----HQHGFKPEHSTTTAVIQVTNDIIGGL 460
Query: 375 NRRKQIPTGALF--FDVAKAFDKVWHNGLIYKLYN-MGVPDRLVLIIRDFLSNRSFRYRV 545
N K P A+ D+ AFDKV L L G+ ++ L + ++L R R
Sbjct: 461 N-MKNPPERAIMACLDLRAAFDKVPTKKLCNDLMEAQGIEPKIKLWLGNYLHKRLIRTSH 519
Query: 546 EGTRSRPRHLTAGVPQGSALSPLLFSLYINDIPGSPETHLXLFADDTXIYYSCRKM 713
+ S+ L GVPQGS +SP LF+ Y+ D+P +T L +ADD I +K+
Sbjct: 520 DNHWSKWHTLLGGVPQGSVISPNLFTFYLKDMPTQQDTMLISYADDMSIIARDKKI 575
>U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical
protein F31A9.6 protein.
Length = 358
Score = 88.6 bits (210), Expect = 5e-18
Identities = 47/104 (45%), Positives = 66/104 (63%), Gaps = 2/104 (1%)
Frame = +3
Query: 405 LFFDVAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVEGTRSRPRHLTAG 584
++ D +KAFD++ H+ L+ KL ++ L++ + +FLSNRSFR R+ T S + T G
Sbjct: 17 IYLDFSKAFDRLPHDLLLDKLVSLRKNKNLLIWVNEFLSNRSFRVRIGQTLSSRKFATCG 76
Query: 585 VPQGSALSPLLFSLYINDIPG-SPE-THLXLFADDTXIYYSCRK 710
VPQG+ LSPLLF +Y+NDI PE FADDT +Y S K
Sbjct: 77 VPQGAVLSPLLFGIYVNDISSILPEKVACKQFADDTKLYASTPK 120
>AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse
transcriptase protein.
Length = 1066
Score = 80.6 bits (190), Expect = 1e-15
Identities = 61/210 (29%), Positives = 92/210 (43%)
Frame = +3
Query: 12 KAPGSDGIRNRALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPNNETA 191
KA G D I LK +I ++ N + P WK + I K G N
Sbjct: 563 KAAGQDKISADFLKSCHDNVIDLITDRFNRYLHSRNVPKPWKTSKTTLIFKKGDREN-LE 621
Query: 192 SYRPISLLPAIGKIYERLLRKRLWDFVTANKILIDEQFGFRAKHSCVQQVHRLTEHILIG 371
+YRPI LLP + K++ + L R+ + + + EQ GFR S + +H L + +G
Sbjct: 622 NYRPICLLPVLYKVFTKCLLNRMRRSLDEAQPV--EQAGFRRSFSTIDHIHSLQRLLEVG 679
Query: 372 LNRRKQIPTGALFFDVAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVEG 551
R QIP +F D KAFD V H + L G + ++++ N + +
Sbjct: 680 --REYQIPLTLVFIDFKKAFDSVEHQAIWKSLDEQGADGAYIDLLKECYKNCTTNF-TPF 736
Query: 552 TRSRPRHLTAGVPQGSALSPLLFSLYINDI 641
R +T GV QG +SP LFS + +
Sbjct: 737 HRPVAVPVTKGVRQGDPISPNLFSACLEHV 766
>AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical
protein K10F12.5 protein.
Length = 805
Score = 80.6 bits (190), Expect = 1e-15
Identities = 61/210 (29%), Positives = 92/210 (43%)
Frame = +3
Query: 12 KAPGSDGIRNRALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPNNETA 191
KA G D I LK +I ++ N + P WK + I K G N
Sbjct: 302 KAAGQDKISADFLKSCHDNVIDLITDRFNRYLHSRNVPKPWKTSKTTLIFKKGDREN-LE 360
Query: 192 SYRPISLLPAIGKIYERLLRKRLWDFVTANKILIDEQFGFRAKHSCVQQVHRLTEHILIG 371
+YRPI LLP + K++ + L R+ + + + EQ GFR S + +H L + +G
Sbjct: 361 NYRPICLLPVLYKVFTKCLLNRMRRSLDEAQPV--EQAGFRRSFSTIDHIHSLQRLLEVG 418
Query: 372 LNRRKQIPTGALFFDVAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVEG 551
R QIP +F D KAFD V H + L G + ++++ N + +
Sbjct: 419 --REYQIPLTLVFIDFKKAFDSVEHQAIWKSLDEQGADGAYIDLLKECYKNCTTNF-TPF 475
Query: 552 TRSRPRHLTAGVPQGSALSPLLFSLYINDI 641
R +T GV QG +SP LFS + +
Sbjct: 476 HRPVAVPVTKGVRQGDPISPNLFSACLEHV 505
>U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical protein
F20B4.7 protein.
Length = 891
Score = 80.2 bits (189), Expect = 2e-15
Identities = 61/210 (29%), Positives = 92/210 (43%)
Frame = +3
Query: 12 KAPGSDGIRNRALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPNNETA 191
KA G D I LK +I ++ N + P WK + I K G N
Sbjct: 392 KAAGQDKISADFLKSCHDNVIDLITDRFNRYLHSRNVPKPWKTSKTTLIFKKGDREN-LE 450
Query: 192 SYRPISLLPAIGKIYERLLRKRLWDFVTANKILIDEQFGFRAKHSCVQQVHRLTEHILIG 371
+YRPI LLP + K++ + L R+ + + + EQ GFR S + +H L + +G
Sbjct: 451 NYRPICLLPVLYKVFTKCLLNRMRRSLDEAQPV--EQAGFRRSFSTIDHIHSLQRLLEVG 508
Query: 372 LNRRKQIPTGALFFDVAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVEG 551
R QIP +F D KAFD V H + L G + ++++ N + +
Sbjct: 509 --REYQIPLTLVFIDFKKAFDTVEHQAIWKSLDEQGADGAYIDLLKECYKNCTTNF-TPF 565
Query: 552 TRSRPRHLTAGVPQGSALSPLLFSLYINDI 641
R +T GV QG +SP LFS + +
Sbjct: 566 HRPVAVPVTKGVRQGDPISPNLFSACLEHV 595
>AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical
protein C44B12.7 protein.
Length = 389
Score = 60.9 bits (141), Expect = 1e-09
Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Frame = +3
Query: 423 KAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVEGTRSRPRH-LTAGVPQGS 599
KAFD+V H+ L+ KL++ G+ DFLS+R+F +V H +++GVP+GS
Sbjct: 2 KAFDQVNHSLLLQKLHDFGINPLFCNWFHDFLSSRTFSVKVNNHIDPNIHPISSGVPKGS 61
Query: 600 ALSPLLFSLYINDIPGS--PETHLXLFADDTXIY 695
P LF ++IN + S P FADD +Y
Sbjct: 62 VSGPFLFLIFINSLLLSVPPSISCSAFADDLKVY 95
>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
protein F21E9.1 protein.
Length = 1170
Score = 52.4 bits (120), Expect = 4e-07
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
Frame = +3
Query: 462 KLYNMGVPDRLVLIIRDFLSNRSFRYRVEGTRSRPRH-LTAGVPQGSALSPLLFSLYIND 638
KL G+ ++FL NR+F ++ S+ + +++GVPQGS PLLF L+IN+
Sbjct: 839 KLAKFGLDSLTCSWYKEFLENRTFSVKINKFVSKNSYPISSGVPQGSVSGPLLFILFINN 898
Query: 639 --IPGSPETHLXLFADDTXIYYS 701
I +P ++ FADD I+++
Sbjct: 899 LLIDLAPTINISCFADDVKIFHT 921
>AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical
protein Y113G7B.12 protein.
Length = 1042
Score = 41.5 bits (93), Expect = 7e-04
Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 5/102 (4%)
Frame = +3
Query: 405 LFFDVAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVEGTRSRPRH-LTA 581
+ F ++ AFDKV H LI KL + V L R +S ++F +V +H
Sbjct: 890 IHFKLSTAFDKVPHEFLISKLNDFNVHPTLRNWFRKLMSPKTFSVQVNDHLESEKHNCQI 949
Query: 582 GVPQGSALSPLLFSLYIN----DIPGSPETHLXLFADDTXIY 695
G P+GS +F ++IN +IP + ++D IY
Sbjct: 950 GAPRGSESRQFMFLVFINSLLCEIPINISCSACAISEDLEIY 991
>Z81586-9|CAB04699.2| 676|Caenorhabditis elegans Hypothetical
protein T05F1.11 protein.
Length = 676
Score = 36.3 bits (80), Expect = 0.027
Identities = 39/192 (20%), Positives = 83/192 (43%), Gaps = 2/192 (1%)
Frame = +3
Query: 159 HKPGKPNNETASYRPISLLPAIGKIYERLLRKRLWDFVTANKILIDEQFGFRAKH--SCV 332
H P + N+E + IS++ I + L++K+L + + + ++ F+ K+ S
Sbjct: 21 HPPERANDEYVQFAQISVVSGIQEELIELVKKKLLESIELQQFIVGRDIEFQEKYIASLT 80
Query: 333 QQVHRLTEHILIGLNRRKQIPTGALFFDVAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRD 512
+ R H + R +++ + F++ A +K+ NGL + N G ++ V
Sbjct: 81 DGLSRYNNHNELEEIRNEKLSSEERHFELESARNKL--NGLRIQNSNFGRREQKVC---S 135
Query: 513 FLSNRSFRYRVEGTRSRPRHLTAGVPQGSALSPLLFSLYINDIPGSPETHLXLFADDTXI 692
FLS+ + R+ + + + V S + + SL + I E + L
Sbjct: 136 FLSSGFEQVRILSSTAAHDEIRYKVNNASWICSINNSLALQKIKLICEKFIELKKKVEIT 195
Query: 693 YYSCRKMSLLHR 728
++S ++LL +
Sbjct: 196 FWSSEIVTLLEK 207
>AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical
protein Y32G9A.9 protein.
Length = 417
Score = 36.3 bits (80), Expect = 0.027
Identities = 22/79 (27%), Positives = 36/79 (45%)
Frame = +3
Query: 405 LFFDVAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVEGTRSRPRHLTAG 584
+F D KAFD V H + L G + + ++++ N + + R +T G
Sbjct: 40 VFIDFKKAFDSVEHQAIWKSLDEQGADEAYIDLLKECYKNCTTNF-TPFLRPITVPVTKG 98
Query: 585 VPQGSALSPLLFSLYINDI 641
V QG +SP LFS + +
Sbjct: 99 VRQGDPISPNLFSACLEHV 117
>U53344-5|AAA96226.2| 442|Caenorhabditis elegans More of ms protein
1 protein.
Length = 442
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = -2
Query: 151 ITSASFHTAGKMQCVIAAFKMVANIVISWT 62
+ +A+F T K+ C++ AFK + +I IS T
Sbjct: 25 VANATFLTISKLICLVVAFKFIKHIPISTT 54
>AF013489-1|AAC47728.1| 442|Caenorhabditis elegans MOM-1 protein.
Length = 442
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = -2
Query: 151 ITSASFHTAGKMQCVIAAFKMVANIVISWT 62
+ +A+F T K+ C++ AFK + +I IS T
Sbjct: 25 VANATFLTISKLICLVVAFKFIKHIPISTT 54
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,500,558
Number of Sequences: 27780
Number of extensions: 426528
Number of successful extensions: 1147
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1038
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1134
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2072006206
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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