Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_FL5_L12
(1306 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 34 0.19
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 32 0.77
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 32 0.77
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 32 1.0
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 31 1.8
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 31 1.8
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 31 1.8
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 31 2.4
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 2.4
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 2.4
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 2.4
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 30 3.1
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 30 4.1
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 30 4.1
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 5.5
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 5.5
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 5.5
AC006708-23|AAF60414.1| 975|Caenorhabditis elegans Paz/piwi dom... 29 7.2
AC006666-4|AAK21415.1| 109|Caenorhabditis elegans Hypothetical ... 29 7.2
U58757-9|AAM75377.1| 503|Caenorhabditis elegans Hypothetical pr... 29 9.5
U58757-8|AAC47918.3| 506|Caenorhabditis elegans Hypothetical pr... 29 9.5
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 34.3 bits (75), Expect = 0.19
Identities = 14/44 (31%), Positives = 18/44 (40%)
Frame = +2
Query: 1028 LPLXLXPXPXXXXPPXXPPPXXXPXXPPXPXPXXPXXXXLPLSS 1159
+P+ + P P PPP P PP P P P +P S
Sbjct: 49 MPMPVCPPPPPCPAQFCPPPPICPPPPPPPMPCPPPPPPMPRPS 92
Score = 32.7 bits (71), Expect = 0.59
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +2
Query: 1031 PLXLXPXPXXXXPPXXPPPXXXPXXPPXPXPXXPXXXXLP 1150
P P P PP PP P PP P P P P
Sbjct: 61 PAQFCPPPPICPPPPPPPMPCPPPPPPMPRPSCPCMMQRP 100
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical protein
C08B11.5 protein.
Length = 388
Score = 32.3 bits (70), Expect = 0.77
Identities = 27/111 (24%), Positives = 33/111 (29%)
Frame = +3
Query: 957 PRXXXPXSXSXXPXXLXXPPRLSPSP*XXXPXPXMXXPLXXXPXX*XPXXPPXPNLXPPX 1136
P P S + P + P ++P P P M P P P P P + PP
Sbjct: 262 PVPPPPPSVTPMPPPMPPTPGMTPRP-PPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP 320
Query: 1137 XDXSLSXLXRSXALXSSXXPXPPIXXLXSSXXXPXFPPGRXSXXXPXXLPP 1289
R P PP + P PP R P PP
Sbjct: 321 PPS------RFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPP 365
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA binding
protein protein.
Length = 398
Score = 32.3 bits (70), Expect = 0.77
Identities = 27/111 (24%), Positives = 33/111 (29%)
Frame = +3
Query: 957 PRXXXPXSXSXXPXXLXXPPRLSPSP*XXXPXPXMXXPLXXXPXX*XPXXPPXPNLXPPX 1136
P P S + P + P ++P P P M P P P P P + PP
Sbjct: 272 PVPPPPPSVTPMPPPMPPTPGMTPRP-PPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP 330
Query: 1137 XDXSLSXLXRSXALXSSXXPXPPIXXLXSSXXXPXFPPGRXSXXXPXXLPP 1289
R P PP + P PP R P PP
Sbjct: 331 PPS------RFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPP 375
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 31.9 bits (69), Expect = 1.0
Identities = 16/46 (34%), Positives = 16/46 (34%), Gaps = 2/46 (4%)
Frame = +1
Query: 1021 CXPPPRXXSPPXXXPXPSASXP--XXXPPXXPXPXTXXPPXXXTPS 1152
C PPP PP P P PP P P PP PS
Sbjct: 38 CAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPPMPS 83
Score = 31.1 bits (67), Expect = 1.8
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +1
Query: 1027 PPPRXXSPPXXXPXPSASXPXXXPPXXPXPXTXXPP 1134
PPP PP P P P PP P PP
Sbjct: 34 PPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPP 69
Score = 30.7 bits (66), Expect = 2.4
Identities = 14/43 (32%), Positives = 15/43 (34%)
Frame = +2
Query: 1031 PLXLXPXPXXXXPPXXPPPXXXPXXPPXPXPXXPXXXXLPLSS 1159
P + P PP PPP P P P P P P S
Sbjct: 47 PPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPPMPSYSPCQS 89
Score = 30.3 bits (65), Expect = 3.1
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +2
Query: 1046 PXPXXXXPPXXPPPXXXPXXPPXPXPXXPXXXXLPLSSXS 1165
P P P PPP P PP P P P+ S S
Sbjct: 46 PPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPPMPSYS 85
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical protein
F45B8.3 protein.
Length = 241
Score = 31.1 bits (67), Expect = 1.8
Identities = 18/57 (31%), Positives = 19/57 (33%)
Frame = +1
Query: 982 RPXXPXLXYXLRXCXPPPRXXSPPXXXPXPSASXPXXXPPXXPXPXTXXPPXXXTPS 1152
RP Y PPP + P P P P PP P PP TPS
Sbjct: 75 RPSPSCCPYVPPAPLPPPPPPASPCCGPSP-VPAPCCPPPPAPAAPCCPPPPPPTPS 130
Score = 30.3 bits (65), Expect = 3.1
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +2
Query: 1031 PLXLXPXPXXXXPPXXPPPXXXPXXPPXPXPXXP 1132
P L P P P P P P PP P P P
Sbjct: 86 PAPLPPPPPPASPCCGPSPVPAPCCPPPPAPAAP 119
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical protein
C34D4.11 protein.
Length = 136
Score = 31.1 bits (67), Expect = 1.8
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = -2
Query: 1152 RGSXXXXGXXGXGXGGXXGXXXGGGXXGGXXXXGXGXXSRGR 1027
RG G G GG G GGG G G G RGR
Sbjct: 94 RGGGGGGGGGRGGGGGGRGGGGGGGGGRGGGGGGRGGGGRGR 135
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical protein
C50F7.5 protein.
Length = 309
Score = 31.1 bits (67), Expect = 1.8
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +1
Query: 1030 PPRXXSPPXXXPXPSASXPXXXPPXXPXPXTXXPP 1134
PP PP P P PP P P T PP
Sbjct: 246 PPGPPGPPTRRPPGPPGPPTRRPPGPPGPPTRRPP 280
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical protein
T12D8.2 protein.
Length = 207
Score = 30.7 bits (66), Expect = 2.4
Identities = 16/49 (32%), Positives = 20/49 (40%)
Frame = -1
Query: 1153 EREXSXXGGXRXGXGGXXGXXXXGXXXRGXXXXGXGXXX*GEGDXRGGY 1007
+R+ S GG R G GG G G G EG+ RGG+
Sbjct: 90 QRDRSDRGGGRGGRGGNFGDRGGRGRGAGGFRRGGEGGRFNEGERRGGF 138
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.7 bits (66), Expect = 2.4
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +3
Query: 102 PXTXSGSPVPTDPVSLPXXFGXXSTPPSPXRRXPXPP 212
P G P P P LP G PP P P PP
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Score = 28.7 bits (61), Expect = 9.5
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 1067 PPXXPPPXXXPXXPPXPXP 1123
PP PPP P PP P P
Sbjct: 759 PPPPPPPGGCPPPPPPPPP 777
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.7 bits (66), Expect = 2.4
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +3
Query: 102 PXTXSGSPVPTDPVSLPXXFGXXSTPPSPXRRXPXPP 212
P G P P P LP G PP P P PP
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Score = 28.7 bits (61), Expect = 9.5
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 1067 PPXXPPPXXXPXXPPXPXP 1123
PP PPP P PP P P
Sbjct: 759 PPPPPPPGGCPPPPPPPPP 777
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.7 bits (66), Expect = 2.4
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +3
Query: 102 PXTXSGSPVPTDPVSLPXXFGXXSTPPSPXRRXPXPP 212
P G P P P LP G PP P P PP
Sbjct: 319 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 355
Score = 28.7 bits (61), Expect = 9.5
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 1067 PPXXPPPXXXPXXPPXPXP 1123
PP PPP P PP P P
Sbjct: 342 PPPPPPPGGCPPPPPPPPP 360
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 30.3 bits (65), Expect = 3.1
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +2
Query: 1046 PXPXXXXPPXXPPPXXXPXXPPXPXPXXP 1132
P P PP PPP P PP P P
Sbjct: 125 PAPYQQQPPPPPPPPHYPPPPPHYPPPPP 153
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical protein
Y48E1B.1 protein.
Length = 497
Score = 29.9 bits (64), Expect = 4.1
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = +2
Query: 1031 PLXLXPXPXXXXPPXXPPPXXXPXXPPXPXPXXP 1132
P+ + P PP PPP P PP P P P
Sbjct: 342 PVEITEIPPIISPPAPPPPP--PPPPPPPPPQTP 373
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical protein
B0280.13 protein.
Length = 616
Score = 29.9 bits (64), Expect = 4.1
Identities = 21/82 (25%), Positives = 31/82 (37%), Gaps = 2/82 (2%)
Frame = +3
Query: 1011 PPRLSPSP*XXXPXPXMXXPLXXXPXX*XPXXP--PXPNLXPPXXDXSLSXLXRSXALXS 1184
P R++P P P P + P+ P P P P PP + S + +
Sbjct: 436 PTRVAPPPPPSAP-PTIKFPISTGPSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSK 494
Query: 1185 SXXPXPPIXXLXSSXXXPXFPP 1250
S P PP+ + + P PP
Sbjct: 495 SPPPPPPLPPIATPSSVPPPPP 516
Score = 28.7 bits (61), Expect = 9.5
Identities = 17/45 (37%), Positives = 18/45 (40%)
Frame = +3
Query: 78 PNT*XAXXPXTXSGSPVPTDPVSLPXXFGXXSTPPSPXRRXPXPP 212
PN + P S SP P P LP S PP P P PP
Sbjct: 481 PNPSPSPQPAEVSKSPPPPPP--LPPIATPSSVPPPPPPPPPPPP 523
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.5 bits (63), Expect = 5.5
Identities = 13/41 (31%), Positives = 15/41 (36%)
Frame = +1
Query: 1027 PPPRXXSPPXXXPXPSASXPXXXPPXXPXPXTXXPPXXXTP 1149
PPP SPP P PP P + PP +P
Sbjct: 257 PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 297
Score = 29.5 bits (63), Expect = 5.5
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = +1
Query: 1027 PPPRXXSPPXXXPXPSASXPXXXPPXXPXPXTXXPPXXXTP 1149
PPP SPP S P P P P PP P
Sbjct: 273 PPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLP 313
Score = 28.7 bits (61), Expect = 9.5
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +3
Query: 102 PXTXSGSPVPTDPVSLPXXFGXXSTPPSPXRRXPXPP 212
P SGSP P P S PP P P PP
Sbjct: 248 PLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP 284
Score = 28.7 bits (61), Expect = 9.5
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = +1
Query: 1027 PPPRXXSPPXXXPXPSASXPXXXPPXXPXPXTXXPPXXXTP 1149
PPPR SPP P P+ S P P P P P
Sbjct: 265 PPPRTGSPP---PPPTGSPPPPPAGGSPPPPRAGSPPPPPP 302
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.5 bits (63), Expect = 5.5
Identities = 13/41 (31%), Positives = 15/41 (36%)
Frame = +1
Query: 1027 PPPRXXSPPXXXPXPSASXPXXXPPXXPXPXTXXPPXXXTP 1149
PPP SPP P PP P + PP +P
Sbjct: 278 PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 318
Score = 29.5 bits (63), Expect = 5.5
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = +1
Query: 1027 PPPRXXSPPXXXPXPSASXPXXXPPXXPXPXTXXPPXXXTP 1149
PPP SPP S P P P P PP P
Sbjct: 294 PPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLP 334
Score = 28.7 bits (61), Expect = 9.5
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +3
Query: 102 PXTXSGSPVPTDPVSLPXXFGXXSTPPSPXRRXPXPP 212
P SGSP P P S PP P P PP
Sbjct: 269 PLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP 305
Score = 28.7 bits (61), Expect = 9.5
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = +1
Query: 1027 PPPRXXSPPXXXPXPSASXPXXXPPXXPXPXTXXPPXXXTP 1149
PPPR SPP P P+ S P P P P P
Sbjct: 286 PPPRTGSPP---PPPTGSPPPPPAGGSPPPPRAGSPPPPPP 323
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.5 bits (63), Expect = 5.5
Identities = 13/41 (31%), Positives = 15/41 (36%)
Frame = +1
Query: 1027 PPPRXXSPPXXXPXPSASXPXXXPPXXPXPXTXXPPXXXTP 1149
PPP SPP P PP P + PP +P
Sbjct: 263 PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 303
Score = 29.5 bits (63), Expect = 5.5
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = +1
Query: 1027 PPPRXXSPPXXXPXPSASXPXXXPPXXPXPXTXXPPXXXTP 1149
PPP SPP S P P P P PP P
Sbjct: 279 PPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLP 319
Score = 28.7 bits (61), Expect = 9.5
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +3
Query: 102 PXTXSGSPVPTDPVSLPXXFGXXSTPPSPXRRXPXPP 212
P SGSP P P S PP P P PP
Sbjct: 254 PLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP 290
Score = 28.7 bits (61), Expect = 9.5
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = +1
Query: 1027 PPPRXXSPPXXXPXPSASXPXXXPPXXPXPXTXXPPXXXTP 1149
PPPR SPP P P+ S P P P P P
Sbjct: 271 PPPRTGSPP---PPPTGSPPPPPAGGSPPPPRAGSPPPPPP 308
>AC006708-23|AAF60414.1| 975|Caenorhabditis elegans Paz/piwi
domain-containing protein2 protein.
Length = 975
Score = 29.1 bits (62), Expect = 7.2
Identities = 13/36 (36%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Frame = +2
Query: 1031 PLXLXPXPXXXXPPXXPPP--XXXPXXPPXPXPXXP 1132
P+ + P P PP PP P PP P P P
Sbjct: 8 PVTMPPVPPVGFPPVTAPPGLHPPPPVPPVPVPTLP 43
>AC006666-4|AAK21415.1| 109|Caenorhabditis elegans Hypothetical
protein H31G24.1 protein.
Length = 109
Score = 29.1 bits (62), Expect = 7.2
Identities = 15/43 (34%), Positives = 16/43 (37%), Gaps = 1/43 (2%)
Frame = +1
Query: 1027 PPPRXXSPPXXXPX-PSASXPXXXPPXXPXPXTXXPPXXXTPS 1152
PPP PP P A+ P PP P P P PS
Sbjct: 64 PPPSYAQPPQPYAQSPIAAVPPPPPPPPPQPAPAQAPAPKYPS 106
>U58757-9|AAM75377.1| 503|Caenorhabditis elegans Hypothetical protein
C01B10.6b protein.
Length = 503
Score = 28.7 bits (61), Expect = 9.5
Identities = 14/38 (36%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Frame = +1
Query: 1021 CXPPPRXXSPPXXX-PXPSASXPXXXPPXXPXPXTXXP 1131
C P SPP P PS + P PP P P + P
Sbjct: 386 CACSPGAKSPPDQSCPKPSPTDPTPVPPVAPTPPSVCP 423
>U58757-8|AAC47918.3| 506|Caenorhabditis elegans Hypothetical protein
C01B10.6a protein.
Length = 506
Score = 28.7 bits (61), Expect = 9.5
Identities = 14/38 (36%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Frame = +1
Query: 1021 CXPPPRXXSPPXXX-PXPSASXPXXXPPXXPXPXTXXP 1131
C P SPP P PS + P PP P P + P
Sbjct: 389 CACSPGAKSPPDQSCPKPSPTDPTPVPPVAPTPPSVCP 426
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,805,725
Number of Sequences: 27780
Number of extensions: 143069
Number of successful extensions: 1675
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 521
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1282
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3642337300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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