Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP09_FL5_L10
         (1170 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0892 + 7037384-7037795,7038447-7038962,7039507-7039593,703...    25   0.76 
09_02_0327 - 7284829-7284889,7284946-7286126                           24   3.7  
12_02_0928 + 24488891-24489675,24490369-24490421,24490479-244912...    25   4.5  
07_03_0111 + 13535912-13535972,13536081-13536142,13536418-135365...    25   5.5  
03_02_0178 + 6195402-6199158,6199438-6200003                           24   7.3  

>01_01_0892 +
           7037384-7037795,7038447-7038962,7039507-7039593,
           7039698-7039768,7040148-7040224,7040380-7040527,
           7040973-7041134,7041374-7041694
          Length = 597

 Score = 25.4 bits (53), Expect(2) = 0.76
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -3

Query: 751 FFXXPPPPPPP 719
           ++  PPPPPPP
Sbjct: 122 YYGHPPPPPPP 132



 Score = 25.4 bits (53), Expect(2) = 0.76
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = -3

Query: 739 PPPPPPPXK 713
           PPPPPPP K
Sbjct: 129 PPPPPPPFK 137


>09_02_0327 - 7284829-7284889,7284946-7286126
          Length = 413

 Score = 24.2 bits (50), Expect(2) = 3.7
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -3

Query: 751 FFXXPPPPPPP 719
           F   PPPPPPP
Sbjct: 49  FGAHPPPPPPP 59



 Score = 24.2 bits (50), Expect(2) = 3.7
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -3

Query: 739 PPPPPPPXK 713
           PPPPPPP +
Sbjct: 60  PPPPPPPPR 68


>12_02_0928 +
           24488891-24489675,24490369-24490421,24490479-24491229,
           24491322-24491533,24491780-24492570,24492686-24492784
          Length = 896

 Score = 25.4 bits (53), Expect(2) = 4.5
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -3

Query: 748 FXXPPPPPPP 719
           F  PPPPPPP
Sbjct: 166 FALPPPPPPP 175



 Score = 22.6 bits (46), Expect(2) = 4.5
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -3

Query: 736 PPPPPPXK 713
           PPPPPP K
Sbjct: 169 PPPPPPPK 176


>07_03_0111 +
           13535912-13535972,13536081-13536142,13536418-13536510,
           13537577-13537649,13537876-13538265,13538337-13538404,
           13539334-13539375,13540211-13540735,13540817-13540974,
           13541078-13541636,13542438-13542500,13542579-13542680,
           13542779-13543096,13543175-13543267,13543489-13543590,
           13543678-13543782,13544190-13544323,13545097-13545280,
           13545701-13545832,13546215-13546327,13546468-13546558,
           13547138-13549339
          Length = 1889

 Score = 25.4 bits (53), Expect(2) = 5.5
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -3

Query: 748 FXXPPPPPPP 719
           F  PPPPPPP
Sbjct: 121 FGPPPPPPPP 130



 Score = 22.2 bits (45), Expect(2) = 5.5
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -3

Query: 739 PPPPPPPXK 713
           PPPPPP  K
Sbjct: 126 PPPPPPSPK 134


>03_02_0178 + 6195402-6199158,6199438-6200003
          Length = 1440

 Score = 24.2 bits (50), Expect(2) = 7.3
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -3

Query: 739 PPPPPPPXK 713
           PPPPPPP +
Sbjct: 24  PPPPPPPRR 32



 Score = 23.0 bits (47), Expect(2) = 7.3
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -3

Query: 751 FFXXPPPPPPP 719
           F+   PPPPPP
Sbjct: 18  FYDRGPPPPPP 28


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,361,721
Number of Sequences: 37544
Number of extensions: 180496
Number of successful extensions: 6550
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1247
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5391
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3573221976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)