Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_FL5_L08
(836 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0686 - 30900748-30902167,30903442-30904742 33 0.37
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 32 0.65
08_02_0796 - 21300251-21300373,21300846-21301721 31 1.5
11_06_0411 - 23230580-23230795,23231407-23231862,23232142-232321... 30 2.0
09_04_0081 - 14400293-14400397,14400953-14401036,14401144-144012... 29 3.5
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329... 29 3.5
08_02_0813 + 21459776-21461128 29 4.6
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 29 4.6
07_01_0080 + 587674-588510 29 4.6
06_01_0961 - 7389515-7389945,7390840-7391107,7391582-7391707 29 4.6
06_01_0606 - 4382133-4382704,4383017-4383336,4384152-4384258,438... 29 4.6
05_03_0366 - 13102147-13102281,13102560-13102739,13102791-131029... 29 4.6
05_04_0206 + 19034259-19035462,19036870-19037045,19037752-190379... 29 6.1
08_01_0539 + 4679392-4681282,4682060-4682104,4682403-4683560,468... 28 8.0
03_01_0515 - 3864796-3865425 28 8.0
02_01_0296 + 1978565-1981197,1981216-1981639,1982280-1982771,198... 28 8.0
01_07_0188 - 41866689-41866763,41866889-41867155,41867277-418677... 28 8.0
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 32.7 bits (71), Expect = 0.37
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +3
Query: 633 PXXLXRXPXPXNPLXAXPPXPPXXAPPXGPPXXG 734
P P P P A PP PP PP PP G
Sbjct: 319 PKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKG 352
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 2/26 (7%)
Frame = +3
Query: 654 PXPXNPLXAX--PPXPPXXAPPXGPP 725
P P P A PP PP APP PP
Sbjct: 316 PPPPKPAAAAPPPPPPPKAAPPPPPP 341
Score = 28.7 bits (61), Expect = 6.1
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 660 PXNPLXAXPPXPPXXAPPXGPPXXGLS 740
P P PP PP PP PP G S
Sbjct: 337 PPPPPKGPPPPPPAKGPPPPPPPKGPS 363
Score = 28.3 bits (60), Expect = 8.0
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 654 PXPXNPLXAXPPXPPXXAPPXGPPXXG 734
P P A PP PP A P PP G
Sbjct: 317 PPPKPAAAAPPPPPPPKAAPPPPPPKG 343
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 31.9 bits (69), Expect = 0.65
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +3
Query: 654 PXPXNPLXAXPPXPPXXAPPXGPPXXGLS 740
P P P A PP PP PP PP L+
Sbjct: 340 PRPVQPSNAPPPPPPPPPPPPPPPPPKLN 368
>08_02_0796 - 21300251-21300373,21300846-21301721
Length = 332
Score = 30.7 bits (66), Expect = 1.5
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +3
Query: 660 PXNPLXAXPPXPPXXAPPXGPP 725
P PL A PP PP PP PP
Sbjct: 95 PSPPLLALPPPPPPPPPPPPPP 116
>11_06_0411 -
23230580-23230795,23231407-23231862,23232142-23232195,
23232251-23232367
Length = 280
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +2
Query: 182 VRVHRADTGRSSNELDRQTTELERRGMGLQHLAGVLGTL 298
V+ H + R S EL+RQ ELER+G L+ G L +
Sbjct: 89 VQRHGEELERQSRELERQREELERQGRELKMKDGKLNRM 127
>09_04_0081 -
14400293-14400397,14400953-14401036,14401144-14401214,
14401293-14401380,14401487-14401678,14401772-14402704
Length = 490
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = +3
Query: 654 PXPXNPLXAXPPXPP--XXAPPXGPPXXGLS 740
P P P A PP PP APP PP G++
Sbjct: 141 PPPHVPKAAPPPPPPPPPHAPPGPPPTKGVA 171
>02_01_0458 +
3291563-3291733,3292082-3292769,3292847-3293363,
3293438-3293637,3294137-3294372,3294469-3295302
Length = 881
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +3
Query: 633 PXXLXRXPXPXNPLXAXPPXPPXXAPPXGPP 725
P + P P P PP PP PP PP
Sbjct: 349 PKLMPPPPPPPPPPPPPPPPPPPRPPPPPPP 379
>08_02_0813 + 21459776-21461128
Length = 450
Score = 29.1 bits (62), Expect = 4.6
Identities = 20/61 (32%), Positives = 28/61 (45%)
Frame = +3
Query: 255 GEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISIQ 434
G++ C WL + R P LL+ TT R V+ W K+ IS P+SI+
Sbjct: 238 GDYRCPAWLSTDARRLIPR--LLDPNPTT------RISVAQLVETPWFKKTSISRPVSIE 289
Query: 435 L 437
L
Sbjct: 290 L 290
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 29.1 bits (62), Expect = 4.6
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +3
Query: 630 GPXXLXRXPXPXNPLXAXPPXPPXXAPPXGPP 725
GP L P PL PP P +PP PP
Sbjct: 1128 GPPPLPLDAPPPPPLPEGPPPLPSDSPPCQPP 1159
Score = 29.1 bits (62), Expect = 4.6
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +3
Query: 654 PXPXNPLXAXPPXPPXXAPPXGPP 725
P P +P A PP PP +P PP
Sbjct: 1159 PLPPSPPPATPPPPPPLSPSLPPP 1182
>07_01_0080 + 587674-588510
Length = 278
Score = 29.1 bits (62), Expect = 4.6
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 654 PXPXNPLXAXPPXPPXXAPPXGPP 725
P P P PP PP PP PP
Sbjct: 94 PPPPPPSSGSPPPPPPPPPPPPPP 117
>06_01_0961 - 7389515-7389945,7390840-7391107,7391582-7391707
Length = 274
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -2
Query: 724 GGPXGGAXXGGXGGXAXSGXXGXG 653
GGP GGA GG GG +G G
Sbjct: 43 GGPVGGARRGGIGGGLTAGHGSAG 66
>06_01_0606 -
4382133-4382704,4383017-4383336,4384152-4384258,
4384339-4384512,4384956-4385204,4386831-4386986
Length = 525
Score = 29.1 bits (62), Expect = 4.6
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +2
Query: 17 FLLTCAIASAAECENATSLSLMIDSLLATYDRESPPVLQNRSQPD 151
+LL A A + SL +DSL +++PPV Q + +P+
Sbjct: 414 YLLGDAQGPPASTSDERSLMARVDSLCCLIQKDTPPVAQPKPEPN 458
>05_03_0366 -
13102147-13102281,13102560-13102739,13102791-13102992,
13104385-13104575
Length = 235
Score = 29.1 bits (62), Expect = 4.6
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = -1
Query: 284 HQPSAAAPFPCVPTQSFVDPIHLKICQYPHGGLGLTNVSMSQM-QGQVDYDFGVRG 120
H P AAA P VP++ P L + GG GL S S + G + D G+ G
Sbjct: 7 HSPRAAAAAPSVPSR-LPRPFLLSLSSPSRGGSGLVAASASAVAAGGSEGDGGIGG 61
>05_04_0206 +
19034259-19035462,19036870-19037045,19037752-19037975,
19038133-19038914,19039337-19039494
Length = 847
Score = 28.7 bits (61), Expect = 6.1
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +3
Query: 642 LXRXPXPXNPLXAXPPXPPXXAPPXGPP 725
L P P P+ PP PP PP P
Sbjct: 204 LVSSPAPGTPVTPQPPPPPPPPPPDSKP 231
>08_01_0539 +
4679392-4681282,4682060-4682104,4682403-4683560,
4683834-4684204,4684290-4684835,4684927-4685027,
4685117-4685933,4686025-4686213,4686313-4686384,
4686477-4686587,4686647-4686652,4686694-4686794,
4687714-4687813,4687891-4687986,4688157-4688273,
4688367-4688492,4688566-4688619,4688745-4688992,
4689087-4689195,4689284-4689583,4689799-4689963
Length = 2240
Score = 28.3 bits (60), Expect = 8.0
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 654 PXPXNPLXAXPPXPPXXAPPXGPP 725
P P P PP PP PP PP
Sbjct: 432 PPPPPPPPPPPPLPPNMPPPLPPP 455
>03_01_0515 - 3864796-3865425
Length = 209
Score = 28.3 bits (60), Expect = 8.0
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +3
Query: 654 PXPXNPLXAXPPXPPXXAPPXGP 722
P P P A PP PP PP P
Sbjct: 89 PPPPPPPAASPPPPPPSPPPPSP 111
>02_01_0296 +
1978565-1981197,1981216-1981639,1982280-1982771,
1982950-1983087
Length = 1228
Score = 28.3 bits (60), Expect = 8.0
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -3
Query: 366 GRGERSPRRWLQPRLAVPRQASTSVPRTP 280
GRG RS R L+P LA+ A + +P P
Sbjct: 442 GRGPRSTLRILRPGLAISEMARSMLPAEP 470
>01_07_0188 -
41866689-41866763,41866889-41867155,41867277-41867722,
41867945-41868033,41868279-41868368,41868661-41868739,
41868979-41869042,41869597-41869684,41869776-41869836,
41869906-41869969,41870134-41870188,41870275-41870346,
41870469-41870551,41870629-41870724,41871279-41871383,
41872159-41872227,41872470-41872561,41872667-41872886
Length = 704
Score = 28.3 bits (60), Expect = 8.0
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = -1
Query: 311 VRPPQAFRGHQPSAAAPFPCVPTQSFVDPIHLKICQYPHGGLGLTNVSMSQMQGQV 144
++PP H + AP P +P+ S P++ + PH S +QM Q+
Sbjct: 551 LQPPAHMLPHAQGSRAPLPQLPSMSGPPPVNPPLPPMPHPMAMQVQGSSNQMMPQM 606
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,495,562
Number of Sequences: 37544
Number of extensions: 513933
Number of successful extensions: 2698
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1868
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2489
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2315199948
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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