Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_FL5_L08
(836 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 67 2e-13
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 66 4e-13
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 66 4e-13
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 66 5e-13
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 64 2e-12
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 64 2e-12
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 63 3e-12
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 63 3e-12
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 63 3e-12
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 63 3e-12
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 62 6e-12
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 62 6e-12
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 62 6e-12
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 62 8e-12
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 61 1e-11
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 59 6e-11
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 58 1e-10
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 56 4e-10
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 52 9e-09
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 50 2e-08
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 47 2e-07
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 44 2e-06
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 41 2e-05
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 40 4e-05
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 36 5e-04
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 36 5e-04
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 36 5e-04
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 36 5e-04
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 35 8e-04
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 35 8e-04
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 35 8e-04
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 35 0.001
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 32 0.006
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 32 0.008
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 27 0.16
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 27 0.28
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 67.3 bits (157), Expect = 2e-13
Identities = 40/149 (26%), Positives = 70/149 (46%), Gaps = 6/149 (4%)
Frame = +3
Query: 132 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWR 305
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 306 PDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISTPISIQLDNWPNDMQTCTF 473
PD+VL N A G+Y +R + + NG V W+ + +I + +P D QTC
Sbjct: 111 PDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 474 KFGSXMHNSDEMDFVIDKRIYXMXXSXAW 560
KFGS N D++ + + S W
Sbjct: 168 KFGSWTFNGDQVSLALYNNKNFVDLSDYW 196
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 66.1 bits (154), Expect = 4e-13
Identities = 34/119 (28%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Frame = +3
Query: 171 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 344
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 345 GDYALRARVSNNGSVSWIKRLDISTPISIQLDNWPNDMQTCTFKFGSXMHNSDEMDFVI 521
G Y V++NGS ++ + I + +P D Q C KFGS ++ +++D V+
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 66.1 bits (154), Expect = 4e-13
Identities = 34/119 (28%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Frame = +3
Query: 171 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 344
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 345 GDYALRARVSNNGSVSWIKRLDISTPISIQLDNWPNDMQTCTFKFGSXMHNSDEMDFVI 521
G Y V++NGS ++ + I + +P D Q C KFGS ++ +++D V+
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 65.7 bits (153), Expect = 5e-13
Identities = 34/119 (28%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Frame = +3
Query: 171 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 344
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 345 GDYALRARVSNNGSVSWIKRLDISTPISIQLDNWPNDMQTCTFKFGSXMHNSDEMDFVI 521
G Y V++NGS ++ + I + +P D Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 63.7 bits (148), Expect = 2e-12
Identities = 33/119 (27%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Frame = +3
Query: 171 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 344
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 345 GDYALRARVSNNGSVSWIKRLDISTPISIQLDNWPNDMQTCTFKFGSXMHNSDEMDFVI 521
G Y V+++GS ++ + I + +P D Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 63.7 bits (148), Expect = 2e-12
Identities = 33/102 (32%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Frame = +3
Query: 213 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 386
++ +W D +L W+ E+G L V S+ +WRPD+VL N A A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 387 VSWIKRLDISTPISIQLDNWPNDMQTCTFKFGSXMHNSDEMD 512
V W + I ++ +P D QTC KFGS ++ ++D
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVD 178
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 63.3 bits (147), Expect = 3e-12
Identities = 33/119 (27%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Frame = +3
Query: 171 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 344
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 345 GDYALRARVSNNGSVSWIKRLDISTPISIQLDNWPNDMQTCTFKFGSXMHNSDEMDFVI 521
G Y V+++GS ++ + I + +P D Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 63.3 bits (147), Expect = 3e-12
Identities = 33/119 (27%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Frame = +3
Query: 171 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 344
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 345 GDYALRARVSNNGSVSWIKRLDISTPISIQLDNWPNDMQTCTFKFGSXMHNSDEMDFVI 521
G Y V+++GS ++ + I + +P D Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 63.3 bits (147), Expect = 3e-12
Identities = 38/130 (29%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
Frame = +3
Query: 132 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWR 305
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 306 PDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISIQLDNWPNDMQTCTFKFG 482
PD+VL N A A +A + + G V W + I ++ +P D QTC KFG
Sbjct: 113 PDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFG 172
Query: 483 SXMHNSDEMD 512
S ++ ++D
Sbjct: 173 SWTYDGFKVD 182
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 63.3 bits (147), Expect = 3e-12
Identities = 36/105 (34%), Positives = 54/105 (51%), Gaps = 5/105 (4%)
Frame = +3
Query: 213 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSN 377
++ W D +L WN E+G L V SE +W PD+VL N A G+Y + +A +
Sbjct: 86 VEQRWNDYKLKWNPEEYGGVEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKY 142
Query: 378 NGSVSWIKRLDISTPISIQLDNWPNDMQTCTFKFGSXMHNSDEMD 512
G VSW + I ++ +P D Q+C KFGS +N ++D
Sbjct: 143 TGDVSWKPPAIYKSSCEINVEYFPFDEQSCIMKFGSWTYNGAQVD 187
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 62.1 bits (144), Expect = 6e-12
Identities = 32/119 (26%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Frame = +3
Query: 171 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 344
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 345 GDYALRARVSNNGSVSWIKRLDISTPISIQLDNWPNDMQTCTFKFGSXMHNSDEMDFVI 521
G Y V+++GS ++ + + + +P D Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 62.1 bits (144), Expect = 6e-12
Identities = 36/143 (25%), Positives = 68/143 (47%), Gaps = 6/143 (4%)
Frame = +3
Query: 132 KIVVNLTLHL--RHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLW 302
+I N+T+ L + + S + + + + + W D LSW ++ G + V S+ +W
Sbjct: 66 QIANNVTMQLLPKLMEFDDWTSVMELHSWMTLMWTDSHLSWKPSDFDGINYIYVKSDDIW 125
Query: 303 RPDVVLLNAAATT---AGDYALRARVSNNGSVSWIKRLDISTPISIQLDNWPNDMQTCTF 473
PD+ + N+ T G V ++GSVS + + + +WP D C
Sbjct: 126 VPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPYDTHRCRI 185
Query: 474 KFGSXMHNSDEMDFVIDKRIYXM 542
FGS +H+ +E++ +DK+ + M
Sbjct: 186 NFGSWVHSGEEVNIFLDKKGFHM 208
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 62.1 bits (144), Expect = 6e-12
Identities = 41/131 (31%), Positives = 62/131 (47%), Gaps = 5/131 (3%)
Frame = +3
Query: 135 IVVNLTLHLRHA---NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLW 302
+VV L L L N+++ T + L+ W D + W+ E+G T L V SE +W
Sbjct: 46 VVVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIW 103
Query: 303 RPDVVLLNAAATTAGDYAL-RARVSNNGSVSWIKRLDISTPISIQLDNWPNDMQTCTFKF 479
PD+VL N A G + +A + G V W + I + +P D QTC KF
Sbjct: 104 LPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKF 163
Query: 480 GSXMHNSDEMD 512
GS ++ ++D
Sbjct: 164 GSWTYDGIQID 174
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 61.7 bits (143), Expect = 8e-12
Identities = 32/119 (26%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Frame = +3
Query: 171 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 344
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 345 GDYALRARVSNNGSVSWIKRLDISTPISIQLDNWPNDMQTCTFKFGSXMHNSDEMDFVI 521
G Y V+++GS ++ + + + +P D Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 60.9 bits (141), Expect = 1e-11
Identities = 40/133 (30%), Positives = 67/133 (50%), Gaps = 6/133 (4%)
Frame = +3
Query: 132 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWR 305
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 306 PDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISIQLDNWPNDMQTCTF 473
PD+VL N A G+Y + +A V +G V W + SI ++ +P D+QTC
Sbjct: 113 PDIVLYNNAD---GNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFPYDVQTCVL 169
Query: 474 KFGSXMHNSDEMD 512
K GS ++ ++D
Sbjct: 170 KLGSWTYDGFKVD 182
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 58.8 bits (136), Expect = 6e-11
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 2/102 (1%)
Frame = +3
Query: 213 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGS 386
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V NNG+
Sbjct: 76 LKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGT 135
Query: 387 VSWIKRLDISTPISIQLDNWPNDMQTCTFKFGSXMHNSDEMD 512
++ + I + +P D Q C KFGS ++ ++D
Sbjct: 136 CLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQLD 177
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 57.6 bits (133), Expect = 1e-10
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 6/143 (4%)
Frame = +3
Query: 102 RTIGSLPPYSKIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CST 275
R +G+ + + L L L N++ T + ++ W D +L WN ++G T
Sbjct: 37 RPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYKLKWNPDDYGGVDT 94
Query: 276 WLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISIQLDN 443
V SE +W PD+VL N A G+Y + +A + + G V W + I ++
Sbjct: 95 LHVPSEHIWLPDIVLYNNAD---GNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEIDVEY 151
Query: 444 WPNDMQTCTFKFGSXMHNSDEMD 512
+P D QTC KFGS ++ +D
Sbjct: 152 FPFDEQTCFMKFGSWTYDGYTVD 174
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 56.0 bits (129), Expect = 4e-10
Identities = 34/129 (26%), Positives = 56/129 (43%), Gaps = 3/129 (2%)
Frame = +3
Query: 135 IVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 311
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 312 VVLLNAAATTAGDYALRARV--SNNGSVSWIKRLDISTPISIQLDNWPNDMQTCTFKFGS 485
+L N A + V S+ G V W+ + I ++ +P D Q C K+ S
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWAS 151
Query: 486 XMHNSDEMD 512
++ +++
Sbjct: 152 WTYDGYQLE 160
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 51.6 bits (118), Expect = 9e-09
Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 3/107 (2%)
Frame = +3
Query: 174 IRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TA 344
I E + T + + +W+D+RL++ G+ + + R+W+PD N + T
Sbjct: 44 ISEVDMTYSMDCYFRQSWVDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTI 103
Query: 345 GDYALRARVSNNGSVSWIKRLDISTPISIQLDNWPNDMQTCTFKFGS 485
R+ +G V + RL I + L+N+P D Q C +FGS
Sbjct: 104 TSPNKFVRLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 50.4 bits (115), Expect = 2e-08
Identities = 32/128 (25%), Positives = 61/128 (47%), Gaps = 5/128 (3%)
Frame = +3
Query: 141 VNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVV 317
++ L ++H N+ E TV L++ W L+W + E+ ++ V S +W PD+V
Sbjct: 62 IDFGLSIQHYNVDEYSHTVDFHVMLKLMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIV 121
Query: 318 L--LNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISIQLDN--WPNDMQTCTFKFGS 485
+ + + ++ V N+G++ + TP+ + D+ WP D+ CT S
Sbjct: 122 MHSVTSVGIDLEMPSVECIVFNSGTILCVP-FTTYTPV-CEYDHTWWPYDILNCTIHIAS 179
Query: 486 XMHNSDEM 509
H S+E+
Sbjct: 180 WSHGSNEI 187
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 46.8 bits (106), Expect = 2e-07
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Frame = +3
Query: 216 QMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGS 386
+ +W D RLS+ S + ER+WRPD N + + R+S +G
Sbjct: 90 RQSWRDSRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGD 149
Query: 387 VSWIKRLDISTPISIQLDNWPNDMQTCTFKFGS 485
+ + RL I ++L N+P D Q+C GS
Sbjct: 150 ILYSMRLTIKAKCPMELRNFPMDRQSCPLILGS 182
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 43.6 bits (98), Expect = 2e-06
Identities = 32/133 (24%), Positives = 60/133 (45%), Gaps = 6/133 (4%)
Frame = +3
Query: 138 VVNLTLHLRH-ANIRESESTVRILADLQMNWIDKRLSWN--AGEWGCSTWLVSSERLWRP 308
+V + L +R A I + + + + W+D+RL +N G T L + R+W P
Sbjct: 60 IVRVNLFVRSIATISDIKMEYSVQLTFREQWLDERLRFNDFGGRLKYLT-LTDASRVWMP 118
Query: 309 DVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISIQLDNWPNDMQTCTFKF 479
D+ N + + R+ NGSV + R+ ++ + L +P D Q C+ +
Sbjct: 119 DLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVCSLRM 178
Query: 480 GSXMHNSDEMDFV 518
S +D++ F+
Sbjct: 179 ASYGWTTDDLVFL 191
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 40.7 bits (91), Expect = 2e-05
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Frame = +3
Query: 225 WIDKRLSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSV 389
W+D+RL +N G T L + R+W PD+ N + + R+ NGSV
Sbjct: 90 WLDERLRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSV 148
Query: 390 SWIKRLDISTPISIQLDNWPNDMQTCTFKFGSXMHNSDEMDFV 518
+ R+ ++ + L +P D Q C+ + S +D++ F+
Sbjct: 149 LYSIRISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDLVFL 191
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 39.5 bits (88), Expect = 4e-05
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 3/107 (2%)
Frame = +3
Query: 174 IRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDY 353
I E I L W D+RL+++ E + +E++W PD N + D
Sbjct: 75 ISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 134
Query: 354 ALR---ARVSNNGSVSWIKRLDISTPISIQLDNWPNDMQTCTFKFGS 485
R R+S +GSV++ R + + L +P D Q CT + S
Sbjct: 135 TERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIES 181
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 35.9 bits (79), Expect = 5e-04
Identities = 25/119 (21%), Positives = 56/119 (47%), Gaps = 7/119 (5%)
Frame = +3
Query: 183 SESTVRILAD--LQMNWIDKRLSW--NAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGD 350
+E ++ +AD L +W D RL N E + +WRPD NA T +
Sbjct: 45 NEESMTYVADIFLAQSWRDSRLRLPENMSEDYRILDVDWLHNIWRPDCFFKNAKKVTFHE 104
Query: 351 YALRAR---VSNNGSVSWIKRLDISTPISIQLDNWPNDMQTCTFKFGSXMHNSDEMDFV 518
++ + ++ ++ ++ +L + +++ +++P+D Q C+ S H + ++ F+
Sbjct: 105 MSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQDLVFI 163
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 35.9 bits (79), Expect = 5e-04
Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Frame = +3
Query: 225 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 377
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 67 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 122
Query: 378 NGSVSWIKRLDISTPISIQLDNWPNDMQTCTFKFGS 485
+GS++ RL I+ + L +P D Q C + S
Sbjct: 123 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 35.9 bits (79), Expect = 5e-04
Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Frame = +3
Query: 225 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 377
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 67 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 122
Query: 378 NGSVSWIKRLDISTPISIQLDNWPNDMQTCTFKFGS 485
+GS++ RL I+ + L +P D Q C + S
Sbjct: 123 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 35.9 bits (79), Expect = 5e-04
Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Frame = +3
Query: 225 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 377
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 378 NGSVSWIKRLDISTPISIQLDNWPNDMQTCTFKFGS 485
+GS++ RL I+ + L +P D Q C + S
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 97
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 35.1 bits (77), Expect = 8e-04
Identities = 34/149 (22%), Positives = 62/149 (41%), Gaps = 4/149 (2%)
Frame = +3
Query: 84 STRSSQRTIGSLPPYSKIVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLSW-NAG 257
STR +R + P + VN++ L L A+ ES + LQ W D RL + N
Sbjct: 71 STRYDKRLLP--PVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRS 128
Query: 258 EWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISI 431
++ + + +W PD ++ R+ NG+V+++ R +
Sbjct: 129 QYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
Query: 432 QLDNWPNDMQTCTFKFGSXMHNSDEMDFV 518
+L+ +P D C+F S + + +V
Sbjct: 189 RLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 35.1 bits (77), Expect = 8e-04
Identities = 34/149 (22%), Positives = 62/149 (41%), Gaps = 4/149 (2%)
Frame = +3
Query: 84 STRSSQRTIGSLPPYSKIVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLSW-NAG 257
STR +R + P + VN++ L L A+ ES + LQ W D RL + N
Sbjct: 71 STRYDKRLLP--PVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRS 128
Query: 258 EWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISI 431
++ + + +W PD ++ R+ NG+V+++ R +
Sbjct: 129 QYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
Query: 432 QLDNWPNDMQTCTFKFGSXMHNSDEMDFV 518
+L+ +P D C+F S + + +V
Sbjct: 189 RLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 35.1 bits (77), Expect = 8e-04
Identities = 34/149 (22%), Positives = 62/149 (41%), Gaps = 4/149 (2%)
Frame = +3
Query: 84 STRSSQRTIGSLPPYSKIVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLSW-NAG 257
STR +R + P + VN++ L L A+ ES + LQ W D RL + N
Sbjct: 71 STRYDKRLLP--PVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRS 128
Query: 258 EWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISI 431
++ + + +W PD ++ R+ NG+V+++ R +
Sbjct: 129 QYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
Query: 432 QLDNWPNDMQTCTFKFGSXMHNSDEMDFV 518
+L+ +P D C+F S + + +V
Sbjct: 189 RLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 34.7 bits (76), Expect = 0.001
Identities = 19/81 (23%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Frame = +3
Query: 291 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISIQLDNWPNDMQ 461
+ +WRPD NA + T + + + ++ ++ +L + ++ +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 462 TCTFKFGSXMHNSDEMDFVID 524
C + S H +DEM F D
Sbjct: 176 ECKLQMESLSHTTDEMIFQWD 196
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 32.3 bits (70), Expect = 0.006
Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 4/132 (3%)
Frame = +3
Query: 135 IVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRP 308
+ VN++ L L A+ ES + LQ W D RL + N ++ + + +W P
Sbjct: 137 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 196
Query: 309 DV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISIQLDNWPNDMQTCTFKFG 482
D ++ R+ NG+V+++ R + +L+ +P D C+F
Sbjct: 197 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIE 256
Query: 483 SXMHNSDEMDFV 518
S + + +V
Sbjct: 257 SISYEQTAITYV 268
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 31.9 bits (69), Expect = 0.008
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = +3
Query: 297 LWRPDVVLLN--AAATTAGDYA-LRARVSNNGSVSWIKRLDISTPISIQLDNWPNDMQTC 467
+W P V + N ++A T + + + +G V RL + ++L+ +P D+Q C
Sbjct: 97 IWTPTVYVSNEPSSAITGNNVKDVLVSIDPSGMVRLNTRLQATLNCGLRLEKFPFDVQEC 156
Query: 468 TFKFGSXMHNSDEM 509
F S HN +M
Sbjct: 157 PLIFESWTHNVLDM 170
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 27.5 bits (58), Expect = 0.16
Identities = 27/136 (19%), Positives = 57/136 (41%), Gaps = 11/136 (8%)
Frame = +3
Query: 135 IVVNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLS-----WNAGEWGCSTWLVSSER 296
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 297 LWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISTPISIQLDNWPNDMQ 461
LW+PD LNA + AL + S+ N +V + R+ ++ +P D+Q
Sbjct: 71 LWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMDIQ 128
Query: 462 TCTFKFGSXMHNSDEM 509
C S ++ ++
Sbjct: 129 ICPIYIESFSYHKQKL 144
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 26.6 bits (56), Expect = 0.28
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +3
Query: 660 PXNPLXAXPPXPPXXAPPXGPP 725
P P PP P PP GPP
Sbjct: 31 PQAPQRGSPPNPSQGPPPGGPP 52
Score = 24.6 bits (51), Expect = 1.1
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +3
Query: 660 PXNPLXAXPPXPPXXAPPXGPP 725
P NP PP P APP P
Sbjct: 39 PPNPSQGPPPGGPPGAPPSQNP 60
Score = 21.8 bits (44), Expect = 8.1
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 278 PSAAAPFPCVPTQS 237
PSA AP P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 216,828
Number of Sequences: 438
Number of extensions: 5204
Number of successful extensions: 93
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26824317
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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