Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_FL5_K19
(842 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 31 0.87
02_05_0686 - 30900748-30902167,30903442-30904742 31 1.5
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 30 2.0
07_01_0080 + 587674-588510 30 2.0
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 30 2.7
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 30 2.7
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27... 29 3.5
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 29 3.5
02_02_0240 + 8196140-8198248,8198381-8198650 29 3.5
01_03_0005 + 11568545-11569119,11569179-11569191 29 3.5
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 28 8.1
02_05_0300 + 27681204-27681656,27681745-27681840,27681933-276820... 28 8.1
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 31.5 bits (68), Expect = 0.87
Identities = 19/75 (25%), Positives = 19/75 (25%)
Frame = +3
Query: 618 PXXPPXXXPAGPAXXPXPXGXXGAXXXXPXXASPLXXXXXXRXXXXPPXSXXXXXPXXXG 797
P PP P P P G P PL PP P
Sbjct: 1126 PDGPPPLPLDAPPPPPLPEGPPPLPSDSPPCQPPLPPSPPPATPPPPPPLSPSLPPPPPP 1185
Query: 798 XPXPXXXPXXXXPPP 842
P P P PPP
Sbjct: 1186 PPLPSGPPPQPAPPP 1200
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 357 GXXXPPPPPXGGXPXXPPP 413
G PPPPP GG PPP
Sbjct: 361 GPSPPPPPPPGGKKGGPPP 379
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/42 (30%), Positives = 15/42 (35%)
Frame = +3
Query: 546 PXXPXXXXXPPXXXARGXXXPXGXPXXPPXXXPAGPAXXPXP 671
P P PP +G P PP P GP+ P P
Sbjct: 327 PPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPP 368
Score = 29.5 bits (63), Expect = 3.5
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 369 PPPPPXGGXPXXPPP 413
PPPPP G P PPP
Sbjct: 345 PPPPPAKGPPPPPPP 359
Score = 29.5 bits (63), Expect = 3.5
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 369 PPPPPXGGXPXXPPP 413
PPPPP G P PPP
Sbjct: 355 PPPPPKGPSPPPPPP 369
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/40 (32%), Positives = 13/40 (32%)
Frame = +3
Query: 369 PPPPPXGGXPXXPPPXXXXXXXXXXGGXXXXXXXGXXXPP 488
PPPPP P PPP G G PP
Sbjct: 327 PPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPP 366
>10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 30.3 bits (65), Expect = 2.0
Identities = 33/164 (20%), Positives = 35/164 (21%), Gaps = 6/164 (3%)
Frame = +3
Query: 369 PPPPPXGGXPXXPPPXXXXXXXXXXGGXXXXXXXGXXXPPXXXXXXXXXXXXXXXXXXXP 548
PPPPP P PP PP P
Sbjct: 634 PPPPP----PPPPPSLPNRLVPPPPAPGIGNKFPAPPPPPPPPRSSSRTPTGAATSSKGP 689
Query: 549 XXPXXXXXPPXXXARGXXXPXGXPXXPP------XXXPAGPAXXPXPXGXXGAXXXXPXX 710
P PP G P P PP P+ PA P A P
Sbjct: 690 PPPPPPPLPPANRTNGPGVPSAPPPPPPPPPANRSNGPSAPAPPLPPPLPAAANKRNPPA 749
Query: 711 ASPLXXXXXXRXXXXPPXSXXXXXPXXXGXPXPXXXPXXXXPPP 842
P + PP P P P P P
Sbjct: 750 PPPPPLMTGKKAPAPPPPPPQAPKPPGTVPPPPPLHGASGRPHP 793
>07_01_0080 + 587674-588510
Length = 278
Score = 30.3 bits (65), Expect = 2.0
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 369 PPPPPXGGXPXXPPP 413
PPPPP G P PPP
Sbjct: 95 PPPPPSSGSPPPPPP 109
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 29.9 bits (64), Expect = 2.7
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3
Query: 372 PPPPXGGXPXXPPP 413
PPPP GG P PPP
Sbjct: 11 PPPPQGGFPPQPPP 24
Score = 29.1 bits (62), Expect = 4.6
Identities = 24/94 (25%), Positives = 24/94 (25%), Gaps = 4/94 (4%)
Frame = +3
Query: 573 PPXXXARGXXXPX-GXPXX---PPXXXPAGPAXXPXPXGXXGAXXXXPXXASPLXXXXXX 740
PP A G P G P PP P GP P G P
Sbjct: 32 PPQQPAYGHMPPPQGAPPPFLAPPPPPPPGPPPPHQPQFNFGPGPPQQQQPPPPPQMYYQ 91
Query: 741 RXXXXPPXSXXXXXPXXXGXPXPXXXPXXXXPPP 842
PP P P P P PPP
Sbjct: 92 PPPPPPPYGVNSSQPPPPPPPPPSPPPSAPPPPP 125
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 29.9 bits (64), Expect = 2.7
Identities = 27/110 (24%), Positives = 27/110 (24%), Gaps = 4/110 (3%)
Frame = +3
Query: 369 PPPPPXGGXPXXPPPXXXXXXXXXXGGXXXXXXXGXXXPPXXXXXXXXXXXXXXXXXXXP 548
PPPPP GG P G G PP P
Sbjct: 1122 PPPPPIGGLGGHQAPPAPPLPEGIGGVPPPPPVGGLGGPPAPPPPAGFRGGTP------P 1175
Query: 549 XXPXXXXXPPXXXARGXXXPXGXPXXP----PXXXPAGPAXXPXPXGXXG 686
PP RG G P P P P P P P G G
Sbjct: 1176 PNAHGGVAPPPPPPRGHGGVGGPPTPPGAPAPPMPPGVPGGPPPPPGGRG 1225
Score = 29.5 bits (63), Expect = 3.5
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 369 PPPPPXGGXPXXPPP 413
PPPPP GG PPP
Sbjct: 1110 PPPPPPGGITGVPPP 1124
>12_01_0033 -
272848-272943,274026-274169,274264-274375,274521-274702,
274781-274912,275038-276330,279841-280545,280649-280695,
280787-280865
Length = 929
Score = 29.5 bits (63), Expect = 3.5
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 369 PPPPPXGGXPXXPPP 413
PPPPP G P PPP
Sbjct: 624 PPPPPPPGKPGGPPP 638
>11_01_0035 -
256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 29.5 bits (63), Expect = 3.5
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 369 PPPPPXGGXPXXPPP 413
PPPPP G P PPP
Sbjct: 929 PPPPPPPGKPGGPPP 943
>02_02_0240 + 8196140-8198248,8198381-8198650
Length = 792
Score = 29.5 bits (63), Expect = 3.5
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 369 PPPPPXGGXPXXPPP 413
PPPPP GG PPP
Sbjct: 23 PPPPPGGGAKPEPPP 37
>01_03_0005 + 11568545-11569119,11569179-11569191
Length = 195
Score = 29.5 bits (63), Expect = 3.5
Identities = 23/80 (28%), Positives = 25/80 (31%), Gaps = 4/80 (5%)
Frame = -1
Query: 485 GGGXPXGXXXXXXPPPXXXXXXXX----GGGXXWXXPRXGGGXGXXPXXXRXXFFLRRGX 318
GGG G PPP GGG + P GGG G G
Sbjct: 80 GGGGGGGTVMYTSPPPPYSGGGGGSSTGGGGIYYPPPTGGGGGGGGGWQQGG------GG 133
Query: 317 GGGXXXPPPXXGXPPLFXXF 258
GG PPP P F +
Sbjct: 134 GGAYPTPPPPNPFLPYFPFY 153
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 28.3 bits (60), Expect = 8.1
Identities = 25/102 (24%), Positives = 26/102 (25%), Gaps = 1/102 (0%)
Frame = +2
Query: 374 PPPXGGXPTXXPPXPXXXFXXXXGGXXXXXXXWGXXPPXXXXXVXXXXAAXXXXPXXPX- 550
PPP G P PP G PP A P P
Sbjct: 276 PPPPAGPPPPAPPPLPPSHHHHHGHHPP--------PPHPLPPGAGAGAGTGAPPPPPAH 327
Query: 551 PXXXXXXXPXXXGAXXGXXRGPPXPPPXXXXXXXRXXAPXXG 676
P P + G GPP PPP R P G
Sbjct: 328 PAAPAPPPPAPSPSAAGAGSGPPPPPPPAAPAAPRPPGPGPG 369
>02_05_0300 +
27681204-27681656,27681745-27681840,27681933-27682022,
27682126-27682227,27682310-27682456,27683608-27683748,
27683749-27683808,27685133-27685230,27685308-27685410,
27685954-27686037
Length = 457
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = -1
Query: 413 GGGXXWXXPRXGGGXGXXPXXXRXXFFLRRGXGGGXXXP 297
GGG W P GGG G RG GG P
Sbjct: 67 GGGNVWRNPHSGGGGGRGAGGAGGPNKWGRGPGGADGGP 105
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,917,097
Number of Sequences: 37544
Number of extensions: 499022
Number of successful extensions: 3039
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1265
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2612
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2338704516
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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