Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_FL5_K14
(835 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 31 0.013
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 29 0.070
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 27 0.16
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 27 0.16
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 27 0.16
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 27 0.21
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 27 0.21
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 27 0.21
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 27 0.28
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 27 0.28
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 26 0.37
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 26 0.37
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 26 0.37
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 26 0.37
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 26 0.49
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 26 0.49
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 25 0.65
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.6
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.6
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.6
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.6
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.6
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.6
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 2.6
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 23 2.6
Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 p... 23 3.5
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 22 6.1
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 22 6.1
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 31.1 bits (67), Expect = 0.013
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 425 RVSNNGSVSWIXRLDXSTXIPMQLXNWPNDMXTC 526
R+S +G + + RL PM+L N+P D +C
Sbjct: 143 RISQDGDILYSMRLTIKAKCPMELRNFPMDRQSC 176
Score = 22.2 bits (45), Expect = 6.1
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +1
Query: 349 ERLWRPDVVLLN 384
ER+WRPD N
Sbjct: 115 ERIWRPDTYFYN 126
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 28.7 bits (61), Expect = 0.070
Identities = 24/101 (23%), Positives = 40/101 (39%), Gaps = 2/101 (1%)
Frame = +2
Query: 230 IRESESTVRILADLQMNWIDKRLSWNAG*MGLQHLAGVLXNACGGLTWYC*TRLQPPPGT 409
I E + T + + +W+D+RL++ G L +L T++ +
Sbjct: 44 ISEVDMTYSMDCYFRQSWVDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTI 103
Query: 410 TL--SVARVSNNGSVSWIXRLDXSTXIPMQLXNWPNDMXTC 526
T R+ +G V + RL PM L N+P D C
Sbjct: 104 TSPNKFVRLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQRC 144
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 27.5 bits (58), Expect = 0.16
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +1
Query: 304 ERRVNGAAALGWCPRERLWRPDVVLLNAA 390
E + G + P + +WRPD+VL N A
Sbjct: 93 EPKEYGGVKMLHVPSDHIWRPDIVLYNNA 121
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 27.5 bits (58), Expect = 0.16
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +1
Query: 304 ERRVNGAAALGWCPRERLWRPDVVLLNAA 390
E + G + P + +WRPD+VL N A
Sbjct: 93 EPKEYGGVKMLHVPSDHIWRPDIVLYNNA 121
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 27.5 bits (58), Expect = 0.16
Identities = 20/90 (22%), Positives = 41/90 (45%), Gaps = 5/90 (5%)
Frame = +1
Query: 136 MIDSLLATYDRESPPVLQNRSQPDPAFETC*HS*VRVHRADTGRSSNE-LDRQTTELERR 312
+ D LL+ Y+R PV+ N + ++ + ++N ++++ + + +
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVWVEQRWNDYKLK 96
Query: 313 VN----GAAALGWCPRERLWRPDVVLLNAA 390
N G + + P E +W PD+VL N A
Sbjct: 97 WNPEEYGGVEMLYVPSENIWLPDIVLYNNA 126
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 27.1 bits (57), Expect = 0.21
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +1
Query: 343 PRERLWRPDVVLLNAA 390
P + +WRPD+VL N A
Sbjct: 102 PSDHIWRPDIVLYNNA 117
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 27.1 bits (57), Expect = 0.21
Identities = 25/105 (23%), Positives = 38/105 (36%), Gaps = 5/105 (4%)
Frame = +1
Query: 91 IASAAECENATSLSLMIDSLLATYDRESPPVLQNRSQPDPAFETC*HS*VRVHRADTGRS 270
I SA C + D LL+ Y+R PV N + ++ D +
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 271 SN-----ELDRQTTELERRVNGAAALGWCPRERLWRPDVVLLNAA 390
+N E + + G + P E +W PD+VL N A
Sbjct: 69 TNVWLEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNA 113
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 27.1 bits (57), Expect = 0.21
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +1
Query: 343 PRERLWRPDVVLLNAA 390
P RLW+PDV++ N+A
Sbjct: 101 PPHRLWKPDVLMYNSA 116
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 26.6 bits (56), Expect = 0.28
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +2
Query: 425 RVSNNGSVSWIXRLDXSTXIPMQLXNWPNDMXTC 526
R+ NGSV + R+ + PM L +P D C
Sbjct: 141 RIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVC 174
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 26.6 bits (56), Expect = 0.28
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +2
Query: 425 RVSNNGSVSWIXRLDXSTXIPMQLXNWPNDMXTC 526
R+ NGSV + R+ + PM L +P D C
Sbjct: 141 RIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVC 174
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 26.2 bits (55), Expect = 0.37
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +2
Query: 407 TTLSVARVSNNGSVSWIXRLDXSTXIPMQLXNWPNDMXTC 526
T+ R+ ++GS++ RL + PM L +P D C
Sbjct: 113 TSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLC 152
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 26.2 bits (55), Expect = 0.37
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +2
Query: 407 TTLSVARVSNNGSVSWIXRLDXSTXIPMQLXNWPNDMXTC 526
T+ R+ ++GS++ RL + PM L +P D C
Sbjct: 113 TSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLC 152
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 26.2 bits (55), Expect = 0.37
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +1
Query: 343 PRERLWRPDVVLLNAA 390
P +++W+PD+VL N A
Sbjct: 104 PPDKVWKPDIVLFNNA 119
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 26.2 bits (55), Expect = 0.37
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +2
Query: 407 TTLSVARVSNNGSVSWIXRLDXSTXIPMQLXNWPNDMXTC 526
T+ R+ ++GS++ RL + PM L +P D C
Sbjct: 52 TSNEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLC 91
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 25.8 bits (54), Expect = 0.49
Identities = 10/38 (26%), Positives = 19/38 (50%)
Frame = +2
Query: 197 VNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNA 310
++ L ++H N+ E TV L++ W L+W +
Sbjct: 62 IDFGLSIQHYNVDEYSHTVDFHVMLKLMWEQSHLTWKS 99
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 25.8 bits (54), Expect = 0.49
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +1
Query: 343 PRERLWRPDVVLLNAA 390
P R+WRPD +L N A
Sbjct: 83 PYNRVWRPDTILYNNA 98
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 25.4 bits (53), Expect = 0.65
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +1
Query: 343 PRERLWRPDVVLLNAA 390
P E +W PD+VL N A
Sbjct: 98 PSEHIWLPDIVLYNNA 113
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 23.4 bits (48), Expect = 2.6
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = +2
Query: 227 NIRESESTVRILADLQMNWIDKRLSWN 307
++ E + A L++ W+D L WN
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWN 51
Score = 23.4 bits (48), Expect = 2.6
Identities = 6/13 (46%), Positives = 12/13 (92%)
Frame = +1
Query: 352 RLWRPDVVLLNAA 390
+LW+PD+++ N+A
Sbjct: 67 KLWKPDILMYNSA 79
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 23.4 bits (48), Expect = 2.6
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = +2
Query: 227 NIRESESTVRILADLQMNWIDKRLSWN 307
++ E + A L++ W+D L WN
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWN 51
Score = 23.4 bits (48), Expect = 2.6
Identities = 6/13 (46%), Positives = 12/13 (92%)
Frame = +1
Query: 352 RLWRPDVVLLNAA 390
+LW+PD+++ N+A
Sbjct: 67 KLWKPDILMYNSA 79
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 23.4 bits (48), Expect = 2.6
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = +2
Query: 227 NIRESESTVRILADLQMNWIDKRLSWN 307
++ E + A L++ W+D L WN
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWN 51
Score = 23.4 bits (48), Expect = 2.6
Identities = 6/13 (46%), Positives = 12/13 (92%)
Frame = +1
Query: 352 RLWRPDVVLLNAA 390
+LW+PD+++ N+A
Sbjct: 67 KLWKPDILMYNSA 79
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 23.4 bits (48), Expect = 2.6
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = +2
Query: 227 NIRESESTVRILADLQMNWIDKRLSWN 307
++ E + A L++ W+D L WN
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWN 51
Score = 23.4 bits (48), Expect = 2.6
Identities = 6/13 (46%), Positives = 12/13 (92%)
Frame = +1
Query: 352 RLWRPDVVLLNAA 390
+LW+PD+++ N+A
Sbjct: 67 KLWKPDILMYNSA 79
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 23.4 bits (48), Expect = 2.6
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = +2
Query: 227 NIRESESTVRILADLQMNWIDKRLSWN 307
++ E + A L++ W+D L WN
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWN 51
Score = 23.4 bits (48), Expect = 2.6
Identities = 6/13 (46%), Positives = 12/13 (92%)
Frame = +1
Query: 352 RLWRPDVVLLNAA 390
+LW+PD+++ N+A
Sbjct: 67 KLWKPDILMYNSA 79
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 23.4 bits (48), Expect = 2.6
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = +2
Query: 227 NIRESESTVRILADLQMNWIDKRLSWN 307
++ E + A L++ W+D L WN
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWN 51
Score = 23.4 bits (48), Expect = 2.6
Identities = 6/13 (46%), Positives = 12/13 (92%)
Frame = +1
Query: 352 RLWRPDVVLLNAA 390
+LW+PD+++ N+A
Sbjct: 67 KLWKPDILMYNSA 79
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.4 bits (48), Expect = 2.6
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = +2
Query: 227 NIRESESTVRILADLQMNWIDKRLSWN 307
++ E + A L++ W+D L WN
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWN 119
Score = 23.4 bits (48), Expect = 2.6
Identities = 6/13 (46%), Positives = 12/13 (92%)
Frame = +1
Query: 352 RLWRPDVVLLNAA 390
+LW+PD+++ N+A
Sbjct: 135 KLWKPDILMYNSA 147
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.4 bits (48), Expect = 2.6
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = +2
Query: 227 NIRESESTVRILADLQMNWIDKRLSWN 307
++ E + A L++ W+D L WN
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWN 119
Score = 23.4 bits (48), Expect = 2.6
Identities = 6/13 (46%), Positives = 12/13 (92%)
Frame = +1
Query: 352 RLWRPDVVLLNAA 390
+LW+PD+++ N+A
Sbjct: 135 KLWKPDILMYNSA 147
>Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1
protein.
Length = 402
Score = 23.0 bits (47), Expect = 3.5
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -3
Query: 353 RSRGHQPSAAAPFTLRSNSVVCRSNSFEDLPVSAR 249
R+RG+QPS + RS V R+ S + +S R
Sbjct: 345 RARGNQPSTSECGEFRSVVVQKRNGSMIECNISPR 379
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 22.2 bits (45), Expect = 6.1
Identities = 13/43 (30%), Positives = 18/43 (41%)
Frame = +2
Query: 398 PPGTTLSVARVSNNGSVSWIXRLDXSTXIPMQLXNWPNDMXTC 526
PP T L V ++GSVS + + +WP D C
Sbjct: 145 PPTTCL----VFSSGSVSCVPSVKHVAKCATDFSSWPYDTHRC 183
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 22.2 bits (45), Expect = 6.1
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = -2
Query: 441 PLLDTRATESVVPGGGCSRV*QYHVRPPQAFXRTPA 334
PL +TES G S +HV PP + A
Sbjct: 489 PLGSVSSTESTCSGEVASLTEYHHVAPPSGHHASSA 524
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,311
Number of Sequences: 438
Number of extensions: 3513
Number of successful extensions: 57
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 57
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26702940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -