Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_FL5_K13
(827 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S57132-1|AAB25797.1| 1186|Homo sapiens type XVI collagen alpha 1... 31 5.1
M92642-1|AAA58427.1| 1603|Homo sapiens alpha-1 type XVI collagen... 31 5.1
BC063833-1|AAH63833.1| 1336|Homo sapiens collagen, type XVIII, a... 31 5.1
BC033715-1|AAH33715.1| 816|Homo sapiens Similar to collagen, ty... 31 5.1
AY484971-3|AAR83297.1| 1516|Homo sapiens type XVIII collagen mid... 31 5.1
AY484971-2|AAR83296.1| 1751|Homo sapiens type XVIII collagen lon... 31 5.1
AY484971-1|AAR83298.1| 1336|Homo sapiens type XVIII collagen sho... 31 5.1
AL163302-2|CAB90482.1| 1519|Homo sapiens human type XVIII collag... 31 5.1
AF018082-1|AAC39659.1| 1336|Homo sapiens type XVIII collagen pro... 31 5.1
AF018081-1|AAC39658.1| 1516|Homo sapiens type XVIII collagen pro... 31 5.1
AB209571-1|BAD92808.1| 1463|Homo sapiens alpha 1 type XVI collag... 31 5.1
U04520-2|AAC27816.1| 1685|Homo sapiens type IV collagen alpha 5 ... 31 6.7
U04520-1|AAF66217.2| 1691|Homo sapiens type IV collagen alpha 5 ... 31 6.7
M90464-1|AAA52046.1| 910|Homo sapiens alpha-5 type IV collagen ... 31 6.7
M58526-1|AAA99480.1| 1604|Homo sapiens alpha-5 type IV collagen ... 31 6.7
BC035387-1|AAH35387.1| 695|Homo sapiens COL4A5 protein protein. 31 6.7
AL035425-1|CAB90289.2| 1685|Homo sapiens collagen type IV alpha ... 31 6.7
AL034369-4|CAA22267.2| 1685|Homo sapiens collagen type IV alpha ... 31 6.7
AL031622-1|CAI43038.1| 1685|Homo sapiens collagen type IV alpha ... 31 6.7
>S57132-1|AAB25797.1| 1186|Homo sapiens type XVI collagen alpha 1
chain protein.
Length = 1186
Score = 31.1 bits (67), Expect = 5.1
Identities = 31/108 (28%), Positives = 33/108 (30%)
Frame = -3
Query: 747 PGGPGPPXPXXRXGLGXXXGFXXGRXGTPSLXCXHRGTLRXSPXXGXXXXXXXIGPTXRT 568
PG PGPP P G G G+ G P L RG + G G T
Sbjct: 779 PGSPGPPGPPGIQGPAGLDGL-DGKDGKPGL----RGDPGPAGPPGLMGPPGFKGKTGHP 833
Query: 567 GKPGXXXSXXXXXXXHSXSPPXGXXRWPGXQXPLXXETXPVSXDXGPP 424
G PG S P G PG P P GPP
Sbjct: 834 GLPGPKGDCGKPGPPGSTGRP-GAEGEPGAMGPQGRPGPP--GHVGPP 878
>M92642-1|AAA58427.1| 1603|Homo sapiens alpha-1 type XVI collagen
protein.
Length = 1603
Score = 31.1 bits (67), Expect = 5.1
Identities = 31/108 (28%), Positives = 33/108 (30%)
Frame = -3
Query: 747 PGGPGPPXPXXRXGLGXXXGFXXGRXGTPSLXCXHRGTLRXSPXXGXXXXXXXIGPTXRT 568
PG PGPP P G G G+ G P L RG + G G T
Sbjct: 1196 PGSPGPPGPPGIQGPAGLDGL-DGKDGKPGL----RGDPGPAGPPGLMGPPGFKGKTGHP 1250
Query: 567 GKPGXXXSXXXXXXXHSXSPPXGXXRWPGXQXPLXXETXPVSXDXGPP 424
G PG S P G PG P P GPP
Sbjct: 1251 GLPGPKGDCGKPGPPGSTGRP-GAEGEPGAMGPQGRPGPP--GHVGPP 1295
>BC063833-1|AAH63833.1| 1336|Homo sapiens collagen, type XVIII, alpha
1 protein.
Length = 1336
Score = 31.1 bits (67), Expect = 5.1
Identities = 28/108 (25%), Positives = 33/108 (30%)
Frame = -3
Query: 747 PGGPGPPXPXXRXGLGXXXGFXXGRXGTPSLXCXHRGTLRXSPXXGXXXXXXXIGPTXRT 568
PG GPP P R G GF GR G P + GP
Sbjct: 787 PGFRGPPGPYGRPGYKGEIGF-PGRPGRPGMNGLKGEKGEPGDASLGFGMRGMPGPPGPP 845
Query: 567 GKPGXXXSXXXXXXXHSXSPPXGXXRWPGXQXPLXXETXPVSXDXGPP 424
G PG + + S G PG Q P + + GPP
Sbjct: 846 GPPGPPGTPVYDSNVFAESSRPGPPGLPGNQGPPGPK--GAKGEVGPP 891
>BC033715-1|AAH33715.1| 816|Homo sapiens Similar to collagen, type
XVIII, alpha 1 protein.
Length = 816
Score = 31.1 bits (67), Expect = 5.1
Identities = 28/108 (25%), Positives = 33/108 (30%)
Frame = -3
Query: 747 PGGPGPPXPXXRXGLGXXXGFXXGRXGTPSLXCXHRGTLRXSPXXGXXXXXXXIGPTXRT 568
PG GPP P R G GF GR G P + GP
Sbjct: 267 PGFRGPPGPYGRPGYKGEIGF-PGRPGRPGMNGLKGEKGEPGDASLGFGMRGMPGPPGPP 325
Query: 567 GKPGXXXSXXXXXXXHSXSPPXGXXRWPGXQXPLXXETXPVSXDXGPP 424
G PG + + S G PG Q P + + GPP
Sbjct: 326 GPPGPPGTPVYDSNVFAESSRPGPPGLPGNQGPPGPK--GAKGEVGPP 371
>AY484971-3|AAR83297.1| 1516|Homo sapiens type XVIII collagen middle
variant protein.
Length = 1516
Score = 31.1 bits (67), Expect = 5.1
Identities = 28/108 (25%), Positives = 33/108 (30%)
Frame = -3
Query: 747 PGGPGPPXPXXRXGLGXXXGFXXGRXGTPSLXCXHRGTLRXSPXXGXXXXXXXIGPTXRT 568
PG GPP P R G GF GR G P + GP
Sbjct: 967 PGFRGPPGPYGRPGYKGEIGF-PGRPGRPGMNGLKGEKGEPGDASLGFGMRGMPGPPGPP 1025
Query: 567 GKPGXXXSXXXXXXXHSXSPPXGXXRWPGXQXPLXXETXPVSXDXGPP 424
G PG + + S G PG Q P + + GPP
Sbjct: 1026 GPPGPPGTPVYDSNVFAESSRPGPPGLPGNQGPPGPK--GAKGEVGPP 1071
>AY484971-2|AAR83296.1| 1751|Homo sapiens type XVIII collagen long
variant protein.
Length = 1751
Score = 31.1 bits (67), Expect = 5.1
Identities = 28/108 (25%), Positives = 33/108 (30%)
Frame = -3
Query: 747 PGGPGPPXPXXRXGLGXXXGFXXGRXGTPSLXCXHRGTLRXSPXXGXXXXXXXIGPTXRT 568
PG GPP P R G GF GR G P + GP
Sbjct: 1202 PGFRGPPGPYGRPGYKGEIGF-PGRPGRPGMNGLKGEKGEPGDASLGFGMRGMPGPPGPP 1260
Query: 567 GKPGXXXSXXXXXXXHSXSPPXGXXRWPGXQXPLXXETXPVSXDXGPP 424
G PG + + S G PG Q P + + GPP
Sbjct: 1261 GPPGPPGTPVYDSNVFAESSRPGPPGLPGNQGPPGPK--GAKGEVGPP 1306
>AY484971-1|AAR83298.1| 1336|Homo sapiens type XVIII collagen short
variant protein.
Length = 1336
Score = 31.1 bits (67), Expect = 5.1
Identities = 28/108 (25%), Positives = 33/108 (30%)
Frame = -3
Query: 747 PGGPGPPXPXXRXGLGXXXGFXXGRXGTPSLXCXHRGTLRXSPXXGXXXXXXXIGPTXRT 568
PG GPP P R G GF GR G P + GP
Sbjct: 787 PGFRGPPGPYGRPGYKGEIGF-PGRPGRPGMNGLKGEKGEPGDASLGFGMRGMPGPPGPP 845
Query: 567 GKPGXXXSXXXXXXXHSXSPPXGXXRWPGXQXPLXXETXPVSXDXGPP 424
G PG + + S G PG Q P + + GPP
Sbjct: 846 GPPGPPGTPVYDSNVFAESSRPGPPGLPGNQGPPGPK--GAKGEVGPP 891
>AL163302-2|CAB90482.1| 1519|Homo sapiens human type XVIII collagen
protein.
Length = 1519
Score = 31.1 bits (67), Expect = 5.1
Identities = 28/108 (25%), Positives = 33/108 (30%)
Frame = -3
Query: 747 PGGPGPPXPXXRXGLGXXXGFXXGRXGTPSLXCXHRGTLRXSPXXGXXXXXXXIGPTXRT 568
PG GPP P R G GF GR G P + GP
Sbjct: 967 PGFRGPPGPYGRPGYKGEIGF-PGRPGRPGMNGLKGEKGEPGDASLGFGMRGMPGPPGPP 1025
Query: 567 GKPGXXXSXXXXXXXHSXSPPXGXXRWPGXQXPLXXETXPVSXDXGPP 424
G PG + + S G PG Q P + + GPP
Sbjct: 1026 GPPGPPGTPVYDSNVFAESSRPGPPGLPGNQGPPGPK--GAKGEVGPP 1071
>AF018082-1|AAC39659.1| 1336|Homo sapiens type XVIII collagen protein.
Length = 1336
Score = 31.1 bits (67), Expect = 5.1
Identities = 28/108 (25%), Positives = 33/108 (30%)
Frame = -3
Query: 747 PGGPGPPXPXXRXGLGXXXGFXXGRXGTPSLXCXHRGTLRXSPXXGXXXXXXXIGPTXRT 568
PG GPP P R G GF GR G P + GP
Sbjct: 787 PGFRGPPGPYGRPGYKGEIGF-PGRPGRPGMNGLKGEKGEPGDASLGFGMRGMPGPPGPP 845
Query: 567 GKPGXXXSXXXXXXXHSXSPPXGXXRWPGXQXPLXXETXPVSXDXGPP 424
G PG + + S G PG Q P + + GPP
Sbjct: 846 GPPGPPGTPVYDSNVFAESSRPGPPGLPGNQGPPGPK--GAKGEVGPP 891
>AF018081-1|AAC39658.1| 1516|Homo sapiens type XVIII collagen protein.
Length = 1516
Score = 31.1 bits (67), Expect = 5.1
Identities = 28/108 (25%), Positives = 33/108 (30%)
Frame = -3
Query: 747 PGGPGPPXPXXRXGLGXXXGFXXGRXGTPSLXCXHRGTLRXSPXXGXXXXXXXIGPTXRT 568
PG GPP P R G GF GR G P + GP
Sbjct: 967 PGFRGPPGPYGRPGYKGEIGF-PGRPGRPGMNGLKGEKGEPGDASLGFGMRGMPGPPGPP 1025
Query: 567 GKPGXXXSXXXXXXXHSXSPPXGXXRWPGXQXPLXXETXPVSXDXGPP 424
G PG + + S G PG Q P + + GPP
Sbjct: 1026 GPPGPPGTPVYDSNVFAESSRPGPPGLPGNQGPPGPK--GAKGEVGPP 1071
>AB209571-1|BAD92808.1| 1463|Homo sapiens alpha 1 type XVI collagen
precursor variant protein.
Length = 1463
Score = 31.1 bits (67), Expect = 5.1
Identities = 31/108 (28%), Positives = 33/108 (30%)
Frame = -3
Query: 747 PGGPGPPXPXXRXGLGXXXGFXXGRXGTPSLXCXHRGTLRXSPXXGXXXXXXXIGPTXRT 568
PG PGPP P G G G+ G P L RG + G G T
Sbjct: 1056 PGSPGPPGPPGIQGPAGLDGL-DGKDGKPGL----RGDPGPAGPPGLMGPPGFKGKTGHP 1110
Query: 567 GKPGXXXSXXXXXXXHSXSPPXGXXRWPGXQXPLXXETXPVSXDXGPP 424
G PG S P G PG P P GPP
Sbjct: 1111 GLPGPKGDCGKPGPPGSTGRP-GAEGEPGAMGPQGRPGPP--GHVGPP 1155
>U04520-2|AAC27816.1| 1685|Homo sapiens type IV collagen alpha 5 chain
protein.
Length = 1685
Score = 30.7 bits (66), Expect = 6.7
Identities = 23/64 (35%), Positives = 24/64 (37%)
Frame = -3
Query: 747 PGGPGPPXPXXRXGLGXXXGFXXGRXGTPSLXCXHRGTLRXSPXXGXXXXXXXIGPTXRT 568
PG PG P P + GL G G G P L R SP G IGP
Sbjct: 824 PGPPGIPGPIGQPGLHGIPG-EKGDPGPPGLDVPGPPGERGSP--GIPGAPGPIGPPGSP 880
Query: 567 GKPG 556
G PG
Sbjct: 881 GLPG 884
>U04520-1|AAF66217.2| 1691|Homo sapiens type IV collagen alpha 5 chain
protein.
Length = 1691
Score = 30.7 bits (66), Expect = 6.7
Identities = 23/64 (35%), Positives = 24/64 (37%)
Frame = -3
Query: 747 PGGPGPPXPXXRXGLGXXXGFXXGRXGTPSLXCXHRGTLRXSPXXGXXXXXXXIGPTXRT 568
PG PG P P + GL G G G P L R SP G IGP
Sbjct: 824 PGPPGIPGPIGQPGLHGIPG-EKGDPGPPGLDVPGPPGERGSP--GIPGAPGPIGPPGSP 880
Query: 567 GKPG 556
G PG
Sbjct: 881 GLPG 884
>M90464-1|AAA52046.1| 910|Homo sapiens alpha-5 type IV collagen
protein.
Length = 910
Score = 30.7 bits (66), Expect = 6.7
Identities = 23/64 (35%), Positives = 24/64 (37%)
Frame = -3
Query: 747 PGGPGPPXPXXRXGLGXXXGFXXGRXGTPSLXCXHRGTLRXSPXXGXXXXXXXIGPTXRT 568
PG PG P P + GL G G G P L R SP G IGP
Sbjct: 824 PGPPGIPGPIGQPGLHGIPG-EKGDPGPPGLDVPGPPGERGSP--GIPGAPGPIGPPGSP 880
Query: 567 GKPG 556
G PG
Sbjct: 881 GLPG 884
>M58526-1|AAA99480.1| 1604|Homo sapiens alpha-5 type IV collagen
protein.
Length = 1604
Score = 30.7 bits (66), Expect = 6.7
Identities = 23/64 (35%), Positives = 24/64 (37%)
Frame = -3
Query: 747 PGGPGPPXPXXRXGLGXXXGFXXGRXGTPSLXCXHRGTLRXSPXXGXXXXXXXIGPTXRT 568
PG PG P P + GL G G G P L R SP G IGP
Sbjct: 743 PGPPGIPGPIGQPGLHGIPG-EKGDPGPPGLDVPGPPGERGSP--GIPGAPGPIGPPGSP 799
Query: 567 GKPG 556
G PG
Sbjct: 800 GLPG 803
>BC035387-1|AAH35387.1| 695|Homo sapiens COL4A5 protein protein.
Length = 695
Score = 30.7 bits (66), Expect = 6.7
Identities = 23/64 (35%), Positives = 24/64 (37%)
Frame = -3
Query: 747 PGGPGPPXPXXRXGLGXXXGFXXGRXGTPSLXCXHRGTLRXSPXXGXXXXXXXIGPTXRT 568
PG PG P P + GL G G G P L R SP G IGP
Sbjct: 432 PGPPGIPGPIGQPGLHGIPG-EKGDPGPPGLDVPGPPGERGSP--GIPGAPGPIGPPGSP 488
Query: 567 GKPG 556
G PG
Sbjct: 489 GLPG 492
>AL035425-1|CAB90289.2| 1685|Homo sapiens collagen type IV alpha 5
protein.
Length = 1685
Score = 30.7 bits (66), Expect = 6.7
Identities = 23/64 (35%), Positives = 24/64 (37%)
Frame = -3
Query: 747 PGGPGPPXPXXRXGLGXXXGFXXGRXGTPSLXCXHRGTLRXSPXXGXXXXXXXIGPTXRT 568
PG PG P P + GL G G G P L R SP G IGP
Sbjct: 824 PGPPGIPGPIGQPGLHGIPG-EKGDPGPPGLDVPGPPGERGSP--GIPGAPGPIGPPGSP 880
Query: 567 GKPG 556
G PG
Sbjct: 881 GLPG 884
>AL034369-4|CAA22267.2| 1685|Homo sapiens collagen type IV alpha 5
protein.
Length = 1685
Score = 30.7 bits (66), Expect = 6.7
Identities = 23/64 (35%), Positives = 24/64 (37%)
Frame = -3
Query: 747 PGGPGPPXPXXRXGLGXXXGFXXGRXGTPSLXCXHRGTLRXSPXXGXXXXXXXIGPTXRT 568
PG PG P P + GL G G G P L R SP G IGP
Sbjct: 824 PGPPGIPGPIGQPGLHGIPG-EKGDPGPPGLDVPGPPGERGSP--GIPGAPGPIGPPGSP 880
Query: 567 GKPG 556
G PG
Sbjct: 881 GLPG 884
>AL031622-1|CAI43038.1| 1685|Homo sapiens collagen type IV alpha 5
protein.
Length = 1685
Score = 30.7 bits (66), Expect = 6.7
Identities = 23/64 (35%), Positives = 24/64 (37%)
Frame = -3
Query: 747 PGGPGPPXPXXRXGLGXXXGFXXGRXGTPSLXCXHRGTLRXSPXXGXXXXXXXIGPTXRT 568
PG PG P P + GL G G G P L R SP G IGP
Sbjct: 824 PGPPGIPGPIGQPGLHGIPG-EKGDPGPPGLDVPGPPGERGSP--GIPGAPGPIGPPGSP 880
Query: 567 GKPG 556
G PG
Sbjct: 881 GLPG 884
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,470,099
Number of Sequences: 237096
Number of extensions: 1695349
Number of successful extensions: 6112
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 3255
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5897
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10370898348
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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