Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_FL5_K08
(875 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 41 0.001
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 41 0.001
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 41 0.001
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 40 0.002
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 40 0.002
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 40 0.002
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 36 0.038
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 35 0.066
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 35 0.066
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 32 0.47
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 32 0.47
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 0.82
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 0.82
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 31 1.4
AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen prot... 31 1.4
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 30 1.9
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 30 1.9
Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z70207-1|CAA94128.1| 291|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical pr... 30 2.5
AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen stru... 30 2.5
AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen stru... 30 2.5
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 30 2.5
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 30 2.5
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 29 3.3
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 29 3.3
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 29 3.3
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 29 3.3
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 29 3.3
AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical ... 29 3.3
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 4.4
U42437-5|AAA83499.1| 302|Caenorhabditis elegans Dumpy : shorter... 29 4.4
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 29 4.4
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 29 4.4
M23559-1|AAA27994.1| 302|Caenorhabditis elegans protein ( C.ele... 29 4.4
AL021448-3|CAA16275.1| 291|Caenorhabditis elegans Hypothetical ... 29 4.4
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 4.4
AC084197-24|AAM44390.1| 297|Caenorhabditis elegans Collagen pro... 29 4.4
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 29 5.8
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 5.8
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 29 5.8
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 29 5.8
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 29 5.8
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 29 5.8
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 29 5.8
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 29 5.8
AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen prot... 29 5.8
AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen prot... 29 5.8
U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of pr... 28 7.6
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 28 7.6
U80451-9|AAB37843.1| 285|Caenorhabditis elegans Collagen protei... 28 7.6
U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protei... 28 7.6
U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion... 28 7.6
U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion... 28 7.6
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 28 7.6
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 28 7.6
AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen pro... 25 8.8
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 41.1 bits (92), Expect = 0.001
Identities = 23/65 (35%), Positives = 24/65 (36%), Gaps = 1/65 (1%)
Frame = +3
Query: 123 PPXNQXXPPXGXXGXXPPXPXTXXPPPPXFXK-XGKXXGGPXPPPGGXXAXGLXPLKXXG 299
PP + PP G PP P PPPP G P PPP G G P G
Sbjct: 240 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAG----GSPPPPRAG 295
Query: 300 XPXXP 314
P P
Sbjct: 296 SPPPP 300
Score = 38.7 bits (86), Expect = 0.005
Identities = 23/64 (35%), Positives = 23/64 (35%)
Frame = +3
Query: 123 PPXNQXXPPXGXXGXXPPXPXTXXPPPPXFXKXGKXXGGPXPPPGGXXAXGLXPLKXXGX 302
PP PP G PP P PPPP G G PPP A G P G
Sbjct: 273 PPPPTGSPPPPPAGGSPPPPRAGSPPPPP-PPRGSPPTGSLPPP---QAGGSPPPAGTGS 328
Query: 303 PXXP 314
P P
Sbjct: 329 PPPP 332
Score = 34.3 bits (75), Expect = 0.12
Identities = 21/65 (32%), Positives = 23/65 (35%), Gaps = 4/65 (6%)
Frame = +3
Query: 123 PPXNQXXPPXGXXGXXPPXPX-TXXPPPPXFXKXGKXXGGPXPPP---GGXXAXGLXPLK 290
PP PP G PP P + PPP G P PPP G L P +
Sbjct: 257 PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQ 316
Query: 291 XXGXP 305
G P
Sbjct: 317 AGGSP 321
Score = 32.3 bits (70), Expect = 0.47
Identities = 32/138 (23%), Positives = 40/138 (28%)
Frame = +1
Query: 430 GAXXPXGGAGXXPPRXRXXXXXXAXXPXSHXAXRPXGXXAXPSXXXXRGGXPXRTXXXXX 609
G P G G PP R P + P G + P+ RGG +
Sbjct: 318 GGSPPPAGTGSPPPPPRQKRQAPERSPPT--GSPPTG--SPPTGRPPRGGPGKSSEESSE 373
Query: 610 XXXXXXXXXXXTPQAGRXXGXXXXXXXXXXXXXXXRAPPGGXAXPLXXPPXGXPPXXPEG 789
P+ G R+PP G + P PP G PP
Sbjct: 374 SREGPRGGPRGGPRGGPRKSSEESSESREEPRGPRRSPPTG-SPPTGSPPTGRPPRGSPP 432
Query: 790 LAGXPPGXRAXRAKXXSP 843
G PP R K +P
Sbjct: 433 -TGSPPTGLPSRQKRQAP 449
Score = 29.5 bits (63), Expect = 3.3
Identities = 17/56 (30%), Positives = 18/56 (32%), Gaps = 1/56 (1%)
Frame = +3
Query: 120 GPPXNQXXPPXGXXGXXPPXPXTXXPPPPXFXKXGKXXGGP-XPPPGGXXAXGLXP 284
G P PP G PP PPPP + P PP G G P
Sbjct: 305 GSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRPP 360
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 41.1 bits (92), Expect = 0.001
Identities = 23/65 (35%), Positives = 24/65 (36%), Gaps = 1/65 (1%)
Frame = +3
Query: 123 PPXNQXXPPXGXXGXXPPXPXTXXPPPPXFXK-XGKXXGGPXPPPGGXXAXGLXPLKXXG 299
PP + PP G PP P PPPP G P PPP G G P G
Sbjct: 261 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAG----GSPPPPRAG 316
Query: 300 XPXXP 314
P P
Sbjct: 317 SPPPP 321
Score = 38.7 bits (86), Expect = 0.005
Identities = 23/64 (35%), Positives = 23/64 (35%)
Frame = +3
Query: 123 PPXNQXXPPXGXXGXXPPXPXTXXPPPPXFXKXGKXXGGPXPPPGGXXAXGLXPLKXXGX 302
PP PP G PP P PPPP G G PPP A G P G
Sbjct: 294 PPPPTGSPPPPPAGGSPPPPRAGSPPPPP-PPRGSPPTGSLPPP---QAGGSPPPAGTGS 349
Query: 303 PXXP 314
P P
Sbjct: 350 PPPP 353
Score = 34.3 bits (75), Expect = 0.12
Identities = 21/65 (32%), Positives = 23/65 (35%), Gaps = 4/65 (6%)
Frame = +3
Query: 123 PPXNQXXPPXGXXGXXPPXPX-TXXPPPPXFXKXGKXXGGPXPPP---GGXXAXGLXPLK 290
PP PP G PP P + PPP G P PPP G L P +
Sbjct: 278 PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQ 337
Query: 291 XXGXP 305
G P
Sbjct: 338 AGGSP 342
Score = 32.3 bits (70), Expect = 0.47
Identities = 32/138 (23%), Positives = 40/138 (28%)
Frame = +1
Query: 430 GAXXPXGGAGXXPPRXRXXXXXXAXXPXSHXAXRPXGXXAXPSXXXXRGGXPXRTXXXXX 609
G P G G PP R P + P G + P+ RGG +
Sbjct: 339 GGSPPPAGTGSPPPPPRQKRQAPERSPPT--GSPPTG--SPPTGRPPRGGPGKSSEESSE 394
Query: 610 XXXXXXXXXXXTPQAGRXXGXXXXXXXXXXXXXXXRAPPGGXAXPLXXPPXGXPPXXPEG 789
P+ G R+PP G + P PP G PP
Sbjct: 395 SREGPRGGPRGGPRGGPRKSSEESSESREEPRGPRRSPPTG-SPPTGSPPTGRPPRGSPP 453
Query: 790 LAGXPPGXRAXRAKXXSP 843
G PP R K +P
Sbjct: 454 -TGSPPTGLPSRQKRQAP 470
Score = 29.5 bits (63), Expect = 3.3
Identities = 17/56 (30%), Positives = 18/56 (32%), Gaps = 1/56 (1%)
Frame = +3
Query: 120 GPPXNQXXPPXGXXGXXPPXPXTXXPPPPXFXKXGKXXGGP-XPPPGGXXAXGLXP 284
G P PP G PP PPPP + P PP G G P
Sbjct: 326 GSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRPP 381
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 41.1 bits (92), Expect = 0.001
Identities = 23/65 (35%), Positives = 24/65 (36%), Gaps = 1/65 (1%)
Frame = +3
Query: 123 PPXNQXXPPXGXXGXXPPXPXTXXPPPPXFXK-XGKXXGGPXPPPGGXXAXGLXPLKXXG 299
PP + PP G PP P PPPP G P PPP G G P G
Sbjct: 246 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAG----GSPPPPRAG 301
Query: 300 XPXXP 314
P P
Sbjct: 302 SPPPP 306
Score = 38.7 bits (86), Expect = 0.005
Identities = 23/64 (35%), Positives = 23/64 (35%)
Frame = +3
Query: 123 PPXNQXXPPXGXXGXXPPXPXTXXPPPPXFXKXGKXXGGPXPPPGGXXAXGLXPLKXXGX 302
PP PP G PP P PPPP G G PPP A G P G
Sbjct: 279 PPPPTGSPPPPPAGGSPPPPRAGSPPPPP-PPRGSPPTGSLPPP---QAGGSPPPAGTGS 334
Query: 303 PXXP 314
P P
Sbjct: 335 PPPP 338
Score = 34.3 bits (75), Expect = 0.12
Identities = 21/65 (32%), Positives = 23/65 (35%), Gaps = 4/65 (6%)
Frame = +3
Query: 123 PPXNQXXPPXGXXGXXPPXPX-TXXPPPPXFXKXGKXXGGPXPPP---GGXXAXGLXPLK 290
PP PP G PP P + PPP G P PPP G L P +
Sbjct: 263 PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQ 322
Query: 291 XXGXP 305
G P
Sbjct: 323 AGGSP 327
Score = 32.3 bits (70), Expect = 0.47
Identities = 32/138 (23%), Positives = 40/138 (28%)
Frame = +1
Query: 430 GAXXPXGGAGXXPPRXRXXXXXXAXXPXSHXAXRPXGXXAXPSXXXXRGGXPXRTXXXXX 609
G P G G PP R P + P G + P+ RGG +
Sbjct: 324 GGSPPPAGTGSPPPPPRQKRQAPERSPPT--GSPPTG--SPPTGRPPRGGPGKSSEESSE 379
Query: 610 XXXXXXXXXXXTPQAGRXXGXXXXXXXXXXXXXXXRAPPGGXAXPLXXPPXGXPPXXPEG 789
P+ G R+PP G + P PP G PP
Sbjct: 380 SREGPRGGPRGGPRGGPRKSSEESSESREEPRGPRRSPPTG-SPPTGSPPTGRPPRGSPP 438
Query: 790 LAGXPPGXRAXRAKXXSP 843
G PP R K +P
Sbjct: 439 -TGSPPTGLPSRQKRQAP 455
Score = 29.5 bits (63), Expect = 3.3
Identities = 17/56 (30%), Positives = 18/56 (32%), Gaps = 1/56 (1%)
Frame = +3
Query: 120 GPPXNQXXPPXGXXGXXPPXPXTXXPPPPXFXKXGKXXGGP-XPPPGGXXAXGLXP 284
G P PP G PP PPPP + P PP G G P
Sbjct: 311 GSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRPP 366
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 40.3 bits (90), Expect = 0.002
Identities = 18/44 (40%), Positives = 18/44 (40%)
Frame = +3
Query: 123 PPXNQXXPPXGXXGXXPPXPXTXXPPPPXFXKXGKXXGGPXPPP 254
PP PP PP P PPPP G GGP PPP
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 38.3 bits (85), Expect = 0.007
Identities = 19/49 (38%), Positives = 19/49 (38%)
Frame = +3
Query: 123 PPXNQXXPPXGXXGXXPPXPXTXXPPPPXFXKXGKXXGGPXPPPGGXXA 269
PP P G PP P PPPP G G P PPP G A
Sbjct: 746 PPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFA 794
Score = 35.1 bits (77), Expect = 0.066
Identities = 18/46 (39%), Positives = 18/46 (39%)
Frame = +3
Query: 123 PPXNQXXPPXGXXGXXPPXPXTXXPPPPXFXKXGKXXGGPXPPPGG 260
PP PP G PP PPPP G P PPPGG
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPP--PPGGCPPPPPPPPPGG 779
Score = 34.3 bits (75), Expect = 0.12
Identities = 17/44 (38%), Positives = 17/44 (38%)
Frame = +3
Query: 123 PPXNQXXPPXGXXGXXPPXPXTXXPPPPXFXKXGKXXGGPXPPP 254
PP PP G PP PPPP GGP PPP
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPP-GGLPPISGGPPPPP 762
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/64 (32%), Positives = 22/64 (34%)
Frame = +3
Query: 123 PPXNQXXPPXGXXGXXPPXPXTXXPPPPXFXKXGKXXGGPXPPPGGXXAXGLXPLKXXGX 302
PP PP PP PPPP G P PPP G GL P+
Sbjct: 707 PPITGGPPPPPGL---PPITGGPPPPPPPGGLPPITGGPPPPPPPG----GLPPISGGPP 759
Query: 303 PXXP 314
P P
Sbjct: 760 PPPP 763
Score = 29.9 bits (64), Expect = 2.5
Identities = 20/61 (32%), Positives = 21/61 (34%)
Frame = +3
Query: 132 NQXXPPXGXXGXXPPXPXTXXPPPPXFXKXGKXXGGPXPPPGGXXAXGLXPLKXXGXPXX 311
N P G P T PPPP GGP PPP GL P+ P
Sbjct: 692 NLSAPSTSAGGSSALPPITGGPPPP--PGLPPITGGPPPPP---PPGGLPPITGGPPPPP 746
Query: 312 P 314
P
Sbjct: 747 P 747
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 40.3 bits (90), Expect = 0.002
Identities = 18/44 (40%), Positives = 18/44 (40%)
Frame = +3
Query: 123 PPXNQXXPPXGXXGXXPPXPXTXXPPPPXFXKXGKXXGGPXPPP 254
PP PP PP P PPPP G GGP PPP
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 38.3 bits (85), Expect = 0.007
Identities = 19/49 (38%), Positives = 19/49 (38%)
Frame = +3
Query: 123 PPXNQXXPPXGXXGXXPPXPXTXXPPPPXFXKXGKXXGGPXPPPGGXXA 269
PP P G PP P PPPP G G P PPP G A
Sbjct: 746 PPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFA 794
Score = 35.1 bits (77), Expect = 0.066
Identities = 18/46 (39%), Positives = 18/46 (39%)
Frame = +3
Query: 123 PPXNQXXPPXGXXGXXPPXPXTXXPPPPXFXKXGKXXGGPXPPPGG 260
PP PP G PP PPPP G P PPPGG
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPP--PPGGCPPPPPPPPPGG 779
Score = 34.3 bits (75), Expect = 0.12
Identities = 17/44 (38%), Positives = 17/44 (38%)
Frame = +3
Query: 123 PPXNQXXPPXGXXGXXPPXPXTXXPPPPXFXKXGKXXGGPXPPP 254
PP PP G PP PPPP GGP PPP
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPP-GGLPPISGGPPPPP 762
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/64 (32%), Positives = 22/64 (34%)
Frame = +3
Query: 123 PPXNQXXPPXGXXGXXPPXPXTXXPPPPXFXKXGKXXGGPXPPPGGXXAXGLXPLKXXGX 302
PP PP PP PPPP G P PPP G GL P+
Sbjct: 707 PPITGGPPPPPGL---PPITGGPPPPPPPGGLPPITGGPPPPPPPG----GLPPISGGPP 759
Query: 303 PXXP 314
P P
Sbjct: 760 PPPP 763
Score = 29.9 bits (64), Expect = 2.5
Identities = 20/61 (32%), Positives = 21/61 (34%)
Frame = +3
Query: 132 NQXXPPXGXXGXXPPXPXTXXPPPPXFXKXGKXXGGPXPPPGGXXAXGLXPLKXXGXPXX 311
N P G P T PPPP GGP PPP GL P+ P
Sbjct: 692 NLSAPSTSAGGSSALPPITGGPPPP--PGLPPITGGPPPPP---PPGGLPPITGGPPPPP 746
Query: 312 P 314
P
Sbjct: 747 P 747
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 40.3 bits (90), Expect = 0.002
Identities = 18/44 (40%), Positives = 18/44 (40%)
Frame = +3
Query: 123 PPXNQXXPPXGXXGXXPPXPXTXXPPPPXFXKXGKXXGGPXPPP 254
PP PP PP P PPPP G GGP PPP
Sbjct: 328 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 371
Score = 38.3 bits (85), Expect = 0.007
Identities = 19/49 (38%), Positives = 19/49 (38%)
Frame = +3
Query: 123 PPXNQXXPPXGXXGXXPPXPXTXXPPPPXFXKXGKXXGGPXPPPGGXXA 269
PP P G PP P PPPP G G P PPP G A
Sbjct: 329 PPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFA 377
Score = 35.1 bits (77), Expect = 0.066
Identities = 18/46 (39%), Positives = 18/46 (39%)
Frame = +3
Query: 123 PPXNQXXPPXGXXGXXPPXPXTXXPPPPXFXKXGKXXGGPXPPPGG 260
PP PP G PP PPPP G P PPPGG
Sbjct: 319 PPITGGPPPPPPPGGLPPISGGPPPPPP--PPGGCPPPPPPPPPGG 362
Score = 34.3 bits (75), Expect = 0.12
Identities = 17/44 (38%), Positives = 17/44 (38%)
Frame = +3
Query: 123 PPXNQXXPPXGXXGXXPPXPXTXXPPPPXFXKXGKXXGGPXPPP 254
PP PP G PP PPPP GGP PPP
Sbjct: 303 PPITGGPPPPPPPGGLPPITGGPPPPPPP-GGLPPISGGPPPPP 345
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/64 (32%), Positives = 22/64 (34%)
Frame = +3
Query: 123 PPXNQXXPPXGXXGXXPPXPXTXXPPPPXFXKXGKXXGGPXPPPGGXXAXGLXPLKXXGX 302
PP PP PP PPPP G P PPP G GL P+
Sbjct: 290 PPITGGPPPPPGL---PPITGGPPPPPPPGGLPPITGGPPPPPPPG----GLPPISGGPP 342
Query: 303 PXXP 314
P P
Sbjct: 343 PPPP 346
Score = 29.9 bits (64), Expect = 2.5
Identities = 20/61 (32%), Positives = 21/61 (34%)
Frame = +3
Query: 132 NQXXPPXGXXGXXPPXPXTXXPPPPXFXKXGKXXGGPXPPPGGXXAXGLXPLKXXGXPXX 311
N P G P T PPPP GGP PPP GL P+ P
Sbjct: 275 NLSAPSTSAGGSSALPPITGGPPPP--PGLPPITGGPPPPP---PPGGLPPITGGPPPPP 329
Query: 312 P 314
P
Sbjct: 330 P 330
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 35.9 bits (79), Expect = 0.038
Identities = 20/53 (37%), Positives = 20/53 (37%), Gaps = 6/53 (11%)
Frame = +3
Query: 120 GPPXNQXXPPXGXXGXXPPXP------XTXXPPPPXFXKXGKXXGGPXPPPGG 260
GPP Q PP G PP P PPPP G P PP GG
Sbjct: 725 GPPPPQGIPPMGFDPNKPPPPMFQQGFNAGAPPPPFGRGAGPMSSFPPPPRGG 777
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/56 (28%), Positives = 18/56 (32%)
Frame = +3
Query: 123 PPXNQXXPPXGXXGXXPPXPXTXXPPPPXFXKXGKXXGGPXPPPGGXXAXGLXPLK 290
PP + P P PPPP F GGP PP G P +
Sbjct: 758 PPFGRGAGPMSSFPPPPRGGMHHMPPPPSFRGGRGGHGGPPPPHFDRRGGGGPPFR 813
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = +3
Query: 123 PPXNQXXPPXGXXGXXPPXPXTXXPPPPXFXKXGKXXGGPXPPPG 257
PP PP G PP PPP + G G P PP G
Sbjct: 721 PPGVGPPPPQGI----PPMGFDPNKPPPPMFQQGFNAGAPPPPFG 761
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/38 (36%), Positives = 14/38 (36%), Gaps = 2/38 (5%)
Frame = +3
Query: 144 PPXGXXGXXP--PXPXTXXPPPPXFXKXGKXXGGPXPP 251
PP G G P P P PPP G P PP
Sbjct: 708 PPPGIPGYPPAPPPPGVGPPPPQGIPPMGFDPNKPPPP 745
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 35.1 bits (77), Expect = 0.066
Identities = 18/48 (37%), Positives = 19/48 (39%), Gaps = 1/48 (2%)
Frame = +3
Query: 144 PPXGXXGXXPPXPXTXXPPPPX-FXKXGKXXGGPXPPPGGXXAXGLXP 284
PP G P P PPPP F G P PPPG G+ P
Sbjct: 302 PPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPP 349
Score = 28.3 bits (60), Expect = 7.6
Identities = 15/40 (37%), Positives = 15/40 (37%), Gaps = 2/40 (5%)
Frame = +3
Query: 144 PPXGXXGXXPPXPXTXX--PPPPXFXKXGKXXGGPXPPPG 257
PP PP P T P PP G P PPPG
Sbjct: 266 PPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPG 305
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 35.1 bits (77), Expect = 0.066
Identities = 18/48 (37%), Positives = 19/48 (39%), Gaps = 1/48 (2%)
Frame = +3
Query: 144 PPXGXXGXXPPXPXTXXPPPPX-FXKXGKXXGGPXPPPGGXXAXGLXP 284
PP G P P PPPP F G P PPPG G+ P
Sbjct: 312 PPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPP 359
Score = 28.3 bits (60), Expect = 7.6
Identities = 15/40 (37%), Positives = 15/40 (37%), Gaps = 2/40 (5%)
Frame = +3
Query: 144 PPXGXXGXXPPXPXTXX--PPPPXFXKXGKXXGGPXPPPG 257
PP PP P T P PP G P PPPG
Sbjct: 276 PPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPG 315
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 32.3 bits (70), Expect = 0.47
Identities = 17/57 (29%), Positives = 19/57 (33%)
Frame = +3
Query: 144 PPXGXXGXXPPXPXTXXPPPPXFXKXGKXXGGPXPPPGGXXAXGLXPLKXXGXPXXP 314
PP G P T PPPP P PPP G+ P+ P P
Sbjct: 471 PPPGPPSSLLPLINTNAPPPPPMPSINGHAPNPPPPP---PLLGIAPMSTNAPPPPP 524
Score = 31.5 bits (68), Expect = 0.82
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = +3
Query: 123 PPXNQXXPPXGXXGXXPPXPXTXXPPPPXFXKXGKXXGGPXPPP 254
P PP G P PPPP G GGP PPP
Sbjct: 514 PMSTNAPPPPPMPGMAPLSTGAPTPPPPP--PVGMANGGPPPPP 555
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 32.3 bits (70), Expect = 0.47
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = +3
Query: 147 PXGXXGXXPPXPXTXXPPPPXFXKXGKXXGGPXPPPGGXXAXGLXP 284
P G G PP P P G G PPPGG A G P
Sbjct: 403 PGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPP 448
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/50 (34%), Positives = 18/50 (36%), Gaps = 3/50 (6%)
Frame = +3
Query: 120 GPPXNQXXPPXGXXGXXPPXPX---TXXPPPPXFXKXGKXXGGPXPPPGG 260
G P + P G G PP P PPP F G G PGG
Sbjct: 418 GAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPPVGAPPPGAAGAPGG 467
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/54 (29%), Positives = 16/54 (29%)
Frame = +3
Query: 144 PPXGXXGXXPPXPXTXXPPPPXFXKXGKXXGGPXPPPGGXXAXGLXPLKXXGXP 305
PP G PP PPP F G PPP P G P
Sbjct: 334 PPQGPPQGGPPQGSFGAPPPQQFHAPSPQSFGGPPPPVSSAPGNFAPPPQSGPP 387
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.5 bits (68), Expect = 0.82
Identities = 19/45 (42%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = -2
Query: 253 GGGXGPPXIXPXXXKXGGGGXXVXGXGG-XXPXXPXGGXX*FXGG 122
GGG PP P GGGG G GG P P GG GG
Sbjct: 45 GGGCAPPPA-PCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGG 88
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.5 bits (68), Expect = 0.82
Identities = 19/45 (42%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = -2
Query: 253 GGGXGPPXIXPXXXKXGGGGXXVXGXGG-XXPXXPXGGXX*FXGG 122
GGG PP P GGGG G GG P P GG GG
Sbjct: 45 GGGCAPPPA-PCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGG 88
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/49 (32%), Positives = 19/49 (38%)
Frame = +1
Query: 721 PPGGXAXPLXXPPXGXPPXXPEGLAGXPPGXRAXRAKXXSPGXXXRSXP 867
PP P+ PP P P G AG PPG + + PG P
Sbjct: 122 PPKEPCEPITPPPCKPCPEGPPGPAG-PPGPQGNKGPLGPPGPPGPEGP 169
>AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen protein
70 protein.
Length = 530
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -2
Query: 871 PXGRSGXXAPGXXXSPGXPAXPGGXP 794
P G G PG +PG P PGG P
Sbjct: 127 PGGLGGPGNPGGPGTPGGPGTPGGQP 152
Score = 29.1 bits (62), Expect = 4.4
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -2
Query: 871 PXGRSGXXAPGXXXSPGXPAXPGG 800
P G G PG +PG P PGG
Sbjct: 106 PGGPGGLGTPGGPGTPGGPGNPGG 129
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/48 (33%), Positives = 17/48 (35%), Gaps = 2/48 (4%)
Frame = +3
Query: 123 PPXNQXXPPXGXXGXXPPXPXTXXPPPPXF--XKXGKXXGGPXPPPGG 260
PP P PP + PPPP G P PPPGG
Sbjct: 771 PPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPPPPPPGG 818
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/48 (33%), Positives = 17/48 (35%), Gaps = 2/48 (4%)
Frame = +3
Query: 123 PPXNQXXPPXGXXGXXPPXPXTXXPPPPXF--XKXGKXXGGPXPPPGG 260
PP P PP + PPPP G P PPPGG
Sbjct: 771 PPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPPPPPPGG 818
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/49 (34%), Positives = 18/49 (36%)
Frame = +1
Query: 721 PPGGXAXPLXXPPXGXPPXXPEGLAGXPPGXRAXRAKXXSPGXXXRSXP 867
PP PL PP P P G AG PPG + PG P
Sbjct: 124 PPKEPCEPLTPPPCKPCPEGPPGPAG-PPGPDGNKGPLGPPGPPGPEGP 171
>Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical
protein T11F9.9 protein.
Length = 299
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +3
Query: 801 PPGXAGXPGEXXFPGAXXPERPXG 872
PPG G PG PGA P+ P G
Sbjct: 229 PPGQPGQPGHDGQPGAPGPKGPNG 252
>Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical
protein F55C10.3 protein.
Length = 266
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +3
Query: 801 PPGXAGXPGEXXFPGAXXPERPXG 872
PPG G PG PGA P+ P G
Sbjct: 196 PPGQPGQPGHDGQPGAPGPKGPNG 219
>Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical
protein F55C10.2 protein.
Length = 299
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +3
Query: 801 PPGXAGXPGEXXFPGAXXPERPXG 872
PPG G PG PGA P+ P G
Sbjct: 229 PPGQPGQPGHDGQPGAPGPKGPNG 252
>Z70207-1|CAA94128.1| 291|Caenorhabditis elegans Hypothetical
protein F15A2.1 protein.
Length = 291
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +3
Query: 783 RGXXGXPPGXAGXPGEXXFPGAXXPERPXGR 875
RG G PPG G PG+ PG P P G+
Sbjct: 163 RGPNG-PPGPNGHPGQPGRPGPAGPAGPEGK 192
>Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.6 protein.
Length = 299
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +3
Query: 801 PPGXAGXPGEXXFPGAXXPERPXG 872
PPG G PG PGA P+ P G
Sbjct: 229 PPGAPGQPGHDGQPGAPGPKGPNG 252
>Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.4 protein.
Length = 299
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +3
Query: 801 PPGXAGXPGEXXFPGAXXPERPXG 872
PPG G PG PGA P+ P G
Sbjct: 229 PPGAPGQPGHDGQPGAPGPKGPNG 252
>Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical
protein F17C8.2 protein.
Length = 296
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +3
Query: 801 PPGXAGXPGEXXFPGAXXPERPXG 872
PPG G PGE PG+ P P G
Sbjct: 102 PPGPPGPPGEPGQPGSAGPPGPPG 125
>AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-3) protein.
Length = 299
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +3
Query: 801 PPGXAGXPGEXXFPGAXXPERPXG 872
PPG G PG PGA P+ P G
Sbjct: 229 PPGAPGQPGHDGQPGAPGPKGPNG 252
>AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-117) protein.
Length = 299
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +3
Query: 801 PPGXAGXPGEXXFPGAXXPERPXG 872
PPG G PG PGA P+ P G
Sbjct: 229 PPGAPGQPGHDGQPGAPGPKGPNG 252
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 29.9 bits (64), Expect = 2.5
Identities = 19/55 (34%), Positives = 21/55 (38%), Gaps = 4/55 (7%)
Frame = +3
Query: 123 PPXNQXX---PPXGXXGXXPPXPXTXXPPPPXFX-KXGKXXGGPXPPPGGXXAXG 275
PP Q PP G P PPPP + + GGP PPGG G
Sbjct: 725 PPQQQRGYGYPPPPQPGHPYQQPYGQMPPPPHGQYQPQQQQGGPMGPPGGHHEGG 779
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 29.9 bits (64), Expect = 2.5
Identities = 19/55 (34%), Positives = 21/55 (38%), Gaps = 4/55 (7%)
Frame = +3
Query: 123 PPXNQXX---PPXGXXGXXPPXPXTXXPPPPXFX-KXGKXXGGPXPPPGGXXAXG 275
PP Q PP G P PPPP + + GGP PPGG G
Sbjct: 725 PPQQQRGYGYPPPPQPGHPYQQPYGQMPPPPHGQYQPQQQQGGPMGPPGGHHEGG 779
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Frame = +3
Query: 786 GXXGXP--PGXAGXPGEXXFPGAXXPERPXG 872
G G P PG G PG +PGA P P G
Sbjct: 369 GPPGLPGRPGNPGPPGTDGYPGAPGPAGPIG 399
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Frame = +3
Query: 786 GXXGXP--PGXAGXPGEXXFPGAXXPERPXG 872
G G P PG G PG +PGA P P G
Sbjct: 368 GPPGLPGRPGNPGPPGTDGYPGAPGPAGPIG 398
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Frame = +3
Query: 786 GXXGXP--PGXAGXPGEXXFPGAXXPERPXG 872
G G P PG G PG +PGA P P G
Sbjct: 368 GPPGLPGRPGNPGPPGTDGYPGAPGPAGPIG 398
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Frame = +3
Query: 786 GXXGXP--PGXAGXPGEXXFPGAXXPERPXG 872
G G P PG G PG +PGA P P G
Sbjct: 369 GPPGLPGRPGNPGPPGTDGYPGAPGPAGPIG 399
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV)
collagen protein.
Length = 1795
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Frame = +3
Query: 786 GXXGXP--PGXAGXPGEXXFPGAXXPERPXG 872
G G P PG G PG +PGA P P G
Sbjct: 405 GPPGLPGRPGNPGPPGTDGYPGAPGPAGPIG 435
>AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical
protein R12E2.6 protein.
Length = 74
Score = 29.5 bits (63), Expect = 3.3
Identities = 19/56 (33%), Positives = 19/56 (33%), Gaps = 4/56 (7%)
Frame = +3
Query: 120 GPPXNQXXPPXGXXGXXP----PXPXTXXPPPPXFXKXGKXXGGPXPPPGGXXAXG 275
G N PP G P P PPPP F G P PPP G G
Sbjct: 20 GATQNSCCPPPQCCGPPPACGNPCGGGFGPPPPPFGPVGYAL--PPPPPNGYALPG 73
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 29.1 bits (62), Expect = 4.4
Identities = 18/54 (33%), Positives = 19/54 (35%)
Frame = +3
Query: 123 PPXNQXXPPXGXXGXXPPXPXTXXPPPPXFXKXGKXXGGPXPPPGGXXAXGLXP 284
PP + PP PP P T PPPP K P P P A P
Sbjct: 185 PPTTKAPPPPTTKA--PPPPTTKAPPPPTTNKEVTTV-APVPKPAPVTAPAPNP 235
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.1 bits (62), Expect = 4.4
Identities = 18/47 (38%), Positives = 18/47 (38%), Gaps = 2/47 (4%)
Frame = +3
Query: 120 GPPXNQXXPPXGXXGXXPPXPXT--XXPPPPXFXKXGKXXGGPXPPP 254
GP PP G PP P PPPP F G P PPP
Sbjct: 79 GPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMF-------GAPPPPP 118
>U42437-5|AAA83499.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 13 protein.
Length = 302
Score = 29.1 bits (62), Expect = 4.4
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +3
Query: 801 PPGXAGXPGEXXFPGAXXPERPXG 872
PPG +G PG PG P+ P G
Sbjct: 232 PPGPSGQPGNDGTPGQPGPKGPPG 255
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 29.1 bits (62), Expect = 4.4
Identities = 20/61 (32%), Positives = 20/61 (32%), Gaps = 1/61 (1%)
Frame = -2
Query: 298 PXXFXGXXPXAXXPPGGGXGPPXIXPXXXKXG-GGGXXVXGXGGXXPXXPXGGXX*FXGG 122
P G PPGG GPP G GG G GG P G GG
Sbjct: 154 PPPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGG 213
Query: 121 P 119
P
Sbjct: 214 P 214
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 29.1 bits (62), Expect = 4.4
Identities = 20/61 (32%), Positives = 20/61 (32%), Gaps = 1/61 (1%)
Frame = -2
Query: 298 PXXFXGXXPXAXXPPGGGXGPPXIXPXXXKXG-GGGXXVXGXGGXXPXXPXGGXX*FXGG 122
P G PPGG GPP G GG G GG P G GG
Sbjct: 434 PPPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGG 493
Query: 121 P 119
P
Sbjct: 494 P 494
>M23559-1|AAA27994.1| 302|Caenorhabditis elegans protein (
C.elegans collagen (dpy-13) gene, complete cds. ).
Length = 302
Score = 29.1 bits (62), Expect = 4.4
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +3
Query: 801 PPGXAGXPGEXXFPGAXXPERPXG 872
PPG +G PG PG P+ P G
Sbjct: 232 PPGPSGQPGNDGTPGQPGPKGPPG 255
>AL021448-3|CAA16275.1| 291|Caenorhabditis elegans Hypothetical
protein Y2H9A.3 protein.
Length = 291
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +3
Query: 804 PGXAGXPGEXXFPGAXXPERPXGR 875
PG AG PGE PGA P+ G+
Sbjct: 221 PGSAGGPGEAGAPGAPGPDGQPGQ 244
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.1 bits (62), Expect = 4.4
Identities = 20/66 (30%), Positives = 20/66 (30%), Gaps = 4/66 (6%)
Frame = +3
Query: 120 GPPXNQXXPPXGXXGXXPPXPXTXXPP----PPXFXKXGKXXGGPXPPPGGXXAXGLXPL 287
G P P G P PP PP GGP PP GG G PL
Sbjct: 1529 GFPQRGGGPGMGPSQYYHDSPQNRGPPMGGLPPPHGGMNGWRGGPPPPRGGSHCQGPPPL 1588
Query: 288 KXXGXP 305
P
Sbjct: 1589 MGGPPP 1594
>AC084197-24|AAM44390.1| 297|Caenorhabditis elegans Collagen
protein 112 protein.
Length = 297
Score = 29.1 bits (62), Expect = 4.4
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 801 PPGXAGXPGEXXFPGAXXPERPXGR 875
PPG G PG+ PG P+ P G+
Sbjct: 227 PPGQPGTPGQNGQPGQPGPKGPSGQ 251
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/42 (33%), Positives = 16/42 (38%)
Frame = +1
Query: 721 PPGGXAXPLXXPPXGXPPXXPEGLAGXPPGXRAXRAKXXSPG 846
PP P+ PP P P G+ G PPG PG
Sbjct: 130 PPQAPCDPITPPPCKPCPQGPPGVQG-PPGPAGDAGLDGQPG 170
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein
34 protein.
Length = 299
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = +1
Query: 721 PPGGXAXPLXXPPXGXPPXXPEGLAGXPPGXRAXRAKXXSPG 846
PP P+ PP P P G G PPG + SPG
Sbjct: 132 PPQQPCEPITPPPCKPCPQGPPGPPG-PPGPPGDSGEPGSPG 172
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +3
Query: 123 PPXNQXXPPXGXXGXXPPXPXTXXPPPP 206
PP PP PP P PPPP
Sbjct: 496 PPPPPPLPPIATPSSVPPPPPPPPPPPP 523
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = +1
Query: 721 PPGGXAXPLXXPPXGXPPXXPEGLAGXPPGXRAXRAKXXSPG 846
PP P+ PP P P G G PPG + SPG
Sbjct: 132 PPQQPCEPITPPPWKPCPQGPPGPPG-PPGPPGDSGEPGSPG 172
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +3
Query: 144 PPXGXXGXXPPXPXTXXPPPPXFXKXGKXXGGPXPPP 254
PP G G PP P PPPP PPP
Sbjct: 665 PPGGLGGFMPPPP----PPPPMPGDLSSLLAAAPPPP 697
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +3
Query: 144 PPXGXXGXXPPXPXTXXPPPPXFXKXGKXXGGPXPPP 254
PP G G PP P PPPP PPP
Sbjct: 665 PPGGLGGFMPPPP----PPPPMPGDLSSLLAAAPPPP 697
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular
collagen RAM-4 protein.
Length = 299
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = +1
Query: 721 PPGGXAXPLXXPPXGXPPXXPEGLAGXPPGXRAXRAKXXSPG 846
PP P+ PP P P G G PPG + SPG
Sbjct: 132 PPQQPCEPITPPPCKPCPQGPPGPPG-PPGPPGDSGEPGSPG 172
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/43 (34%), Positives = 16/43 (37%), Gaps = 2/43 (4%)
Frame = +3
Query: 120 GPPXNQXXPPXGXXGXXPPXPXTXXPPPPXFXKXGK--XXGGP 242
GPP PP P P PPPP F + GGP
Sbjct: 330 GPPRGFMPPPHPMMFRGGPYPPFFPPPPPHFMRPSSPPTDGGP 372
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/43 (34%), Positives = 16/43 (37%), Gaps = 2/43 (4%)
Frame = +3
Query: 120 GPPXNQXXPPXGXXGXXPPXPXTXXPPPPXFXKXGK--XXGGP 242
GPP PP P P PPPP F + GGP
Sbjct: 330 GPPRGFMPPPHPMMFRGGPYPPFFPPPPPHFMRPSSPPTDGGP 372
>AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen protein
141 protein.
Length = 314
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Frame = +3
Query: 786 GXXGXP--PGXAGXPGEXXFPGAXXPERPXG 872
G G P PG AG PG+ F G P P G
Sbjct: 150 GTPGAPGAPGNAGAPGQDSFGGGPGPAGPTG 180
>AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen protein
108 protein.
Length = 304
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = +1
Query: 721 PPGGXAXPLXXPPXGXPPXXPEGLAGXPPGXRAXRAKXXSPG 846
PP P+ PP P P G G PPG SPG
Sbjct: 137 PPQQPCEPITPPPCKPCPQGPAGPPG-PPGPAGDAGSDGSPG 177
Score = 28.3 bits (60), Expect = 7.6
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +3
Query: 801 PPGXAGXPGEXXFPGAXXPERPXG 872
PPG G PG PG P+ P G
Sbjct: 234 PPGAPGQPGHDGQPGTPGPKGPNG 257
>U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of
presynaptic activity protein.
Length = 1409
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +1
Query: 718 APPGGXAXPLXXPPXGXPPXXPEGLAGXPP 807
APP P PP G PP PEG PP
Sbjct: 973 APPIPKRNP---PPLGAPPKVPEGARAPPP 999
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 28.3 bits (60), Expect = 7.6
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +3
Query: 123 PPXNQXXPPXGXXGXXPPXPXTXXPPPP 206
PP PP G PP P PPPP
Sbjct: 775 PPSAIPLPPRLQGGIPPPPPLGIIPPPP 802
>U80451-9|AAB37843.1| 285|Caenorhabditis elegans Collagen protein
73 protein.
Length = 285
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Frame = +3
Query: 786 GXXGXP--PGXAGXPGEXXFPGAXXPERPXG 872
G G P PG G PGE PG P+ P G
Sbjct: 211 GNPGQPGEPGAQGPPGEDGRPGNSGPQGPPG 241
>U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protein
33 protein.
Length = 304
Score = 28.3 bits (60), Expect = 7.6
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +3
Query: 783 RGXXGXPPGXAGXPGEXXFPGAXXPERP 866
+G G PPG G PGE PG P P
Sbjct: 191 KGPPG-PPGSPGAPGEPGRPGDDAPSEP 217
>U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform b protein.
Length = 1408
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +1
Query: 718 APPGGXAXPLXXPPXGXPPXXPEGLAGXPP 807
APP P PP G PP PEG PP
Sbjct: 973 APPIPKRNP---PPLGAPPKVPEGARAPPP 999
>U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform a protein.
Length = 1409
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +1
Query: 718 APPGGXAXPLXXPPXGXPPXXPEGLAGXPP 807
APP P PP G PP PEG PP
Sbjct: 973 APPIPKRNP---PPLGAPPKVPEGARAPPP 999
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 28.3 bits (60), Expect = 7.6
Identities = 13/42 (30%), Positives = 16/42 (38%)
Frame = +3
Query: 126 PXNQXXPPXGXXGXXPPXPXTXXPPPPXFXKXGKXXGGPXPP 251
P ++ P PP P T PP P + G P PP
Sbjct: 234 PSDEPSPSDPPGPPGPPGPPTRRPPGPPGPPTRRPPGPPGPP 275
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 28.3 bits (60), Expect = 7.6
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +3
Query: 123 PPXNQXXPPXGXXGXXPPXPXTXXPPPP 206
PP PP G PP P PPPP
Sbjct: 775 PPSAIPLPPRLQGGIPPPPPLGIIPPPP 802
>AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen
protein 142 protein.
Length = 325
Score = 24.6 bits (51), Expect(2) = 8.8
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +3
Query: 801 PPGXAGXPGEXXFPG 845
PPG G PGE PG
Sbjct: 96 PPGQPGAPGEQGHPG 110
Score = 21.8 bits (44), Expect(2) = 8.8
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +3
Query: 783 RGXXGXPPGXAGXPG 827
RG PPG G PG
Sbjct: 87 RGCPAGPPGPPGQPG 101
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,209,212
Number of Sequences: 27780
Number of extensions: 236557
Number of successful extensions: 3193
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 571
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2835
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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