Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_FL5_K02
(777 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p pro... 337 1e-92
AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal pr... 336 1e-92
AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA... 336 1e-92
AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE... 308 6e-84
AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB... 308 6e-84
AE014297-1263|AAF54612.2| 161|Drosophila melanogaster CG4863-PD... 242 4e-64
AE014297-1266|AAF54611.1| 125|Drosophila melanogaster CG4863-PC... 206 3e-53
>BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p
protein.
Length = 465
Score = 337 bits (828), Expect = 1e-92
Identities = 155/245 (63%), Positives = 180/245 (73%), Gaps = 1/245 (0%)
Frame = +2
Query: 32 SSMSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVR 211
+ MSHRKFSAPRHGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VR
Sbjct: 10 TDMSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVR 69
Query: 212 EPDRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRF 391
E DRPGSKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRF
Sbjct: 70 EADRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRF 129
Query: 392 YKNWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIXHTQMXXXXXXXXXX 571
YKNWY W D+LG+KSIE DF+KM+RYC V+RVI H+Q+
Sbjct: 130 YKNWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKA 189
Query: 572 HIMEIQLNGGTIXDKVKWGKXHLXKPXPVXSGFAQMK-**LXGXXQGQRIQXXPSPWAPX 748
H+MEIQLNGG+I DKVKW + HL KP V + F Q + G +G+ + S W
Sbjct: 190 HVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTK 249
Query: 749 XLPXK 763
LP K
Sbjct: 250 KLPRK 254
>AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal
protein L3 protein.
Length = 416
Score = 336 bits (827), Expect = 1e-92
Identities = 155/243 (63%), Positives = 179/243 (73%), Gaps = 1/243 (0%)
Frame = +2
Query: 38 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 217
MSHRKFSAPRHGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60
Query: 218 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 397
DRPGSKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYK
Sbjct: 61 DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120
Query: 398 NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIXHTQMXXXXXXXXXXHI 577
NWY W D+LG+KSIE DF+KM+RYC V+RVI H+Q+ H+
Sbjct: 121 NWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHV 180
Query: 578 MEIQLNGGTIXDKVKWGKXHLXKPXPVXSGFAQMK-**LXGXXQGQRIQXXPSPWAPXXL 754
MEIQLNGG+I DKVKW + HL KP V + F Q + G +G+ + S W L
Sbjct: 181 MEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKL 240
Query: 755 PXK 763
P K
Sbjct: 241 PRK 243
>AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA,
isoform A protein.
Length = 416
Score = 336 bits (827), Expect = 1e-92
Identities = 155/243 (63%), Positives = 179/243 (73%), Gaps = 1/243 (0%)
Frame = +2
Query: 38 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 217
MSHRKFSAPRHGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60
Query: 218 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 397
DRPGSKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYK
Sbjct: 61 DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120
Query: 398 NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIXHTQMXXXXXXXXXXHI 577
NWY W D+LG+KSIE DF+KM+RYC V+RVI H+Q+ H+
Sbjct: 121 NWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHV 180
Query: 578 MEIQLNGGTIXDKVKWGKXHLXKPXPVXSGFAQMK-**LXGXXQGQRIQXXPSPWAPXXL 754
MEIQLNGG+I DKVKW + HL KP V + F Q + G +G+ + S W L
Sbjct: 181 MEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKL 240
Query: 755 PXK 763
P K
Sbjct: 241 PRK 243
>AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE,
isoform E protein.
Length = 403
Score = 308 bits (756), Expect = 6e-84
Identities = 142/230 (61%), Positives = 166/230 (72%), Gaps = 1/230 (0%)
Frame = +2
Query: 77 MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV 256
M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGSKINKKE+V
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60
Query: 257 EAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXXXXXXX 436
EAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNWY
Sbjct: 61 EAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKSKKKAFTKA 120
Query: 437 XXXWQDELGRKSIEKDFKKMIRYCSVVRVIXHTQMXXXXXXXXXXHIMEIQLNGGTIXDK 616
W D+LG+KSIE DF+KM+RYC V+RVI H+Q+ H+MEIQLNGG+I DK
Sbjct: 121 SKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDK 180
Query: 617 VKWGKXHLXKPXPVXSGFAQMK-**LXGXXQGQRIQXXPSPWAPXXLPXK 763
VKW + HL KP V + F Q + G +G+ + S W LP K
Sbjct: 181 VKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRK 230
>AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB,
isoform B protein.
Length = 403
Score = 308 bits (756), Expect = 6e-84
Identities = 142/230 (61%), Positives = 166/230 (72%), Gaps = 1/230 (0%)
Frame = +2
Query: 77 MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV 256
M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGSKINKKE+V
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60
Query: 257 EAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXXXXXXX 436
EAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNWY
Sbjct: 61 EAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKSKKKAFTKA 120
Query: 437 XXXWQDELGRKSIEKDFKKMIRYCSVVRVIXHTQMXXXXXXXXXXHIMEIQLNGGTIXDK 616
W D+LG+KSIE DF+KM+RYC V+RVI H+Q+ H+MEIQLNGG+I DK
Sbjct: 121 SKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDK 180
Query: 617 VKWGKXHLXKPXPVXSGFAQMK-**LXGXXQGQRIQXXPSPWAPXXLPXK 763
VKW + HL KP V + F Q + G +G+ + S W LP K
Sbjct: 181 VKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRK 230
>AE014297-1263|AAF54612.2| 161|Drosophila melanogaster CG4863-PD,
isoform D protein.
Length = 161
Score = 242 bits (592), Expect = 4e-64
Identities = 105/123 (85%), Positives = 114/123 (92%)
Frame = +2
Query: 38 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 217
MSHRKFSAPRHGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60
Query: 218 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 397
DRPGSKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYK
Sbjct: 61 DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120
Query: 398 NWY 406
NWY
Sbjct: 121 NWY 123
>AE014297-1266|AAF54611.1| 125|Drosophila melanogaster CG4863-PC,
isoform C protein.
Length = 125
Score = 206 bits (503), Expect = 3e-53
Identities = 90/108 (83%), Positives = 99/108 (91%)
Frame = +2
Query: 77 MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV 256
M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGSKINKKE+V
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60
Query: 257 EAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKN 400
EAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKN
Sbjct: 61 EAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKN 108
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,090,566
Number of Sequences: 53049
Number of extensions: 685460
Number of successful extensions: 1418
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1381
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1418
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3602427675
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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