Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_FL5_J20
(826 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 59 4e-11
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 55 7e-10
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 55 9e-10
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 55 9e-10
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 54 1e-09
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 54 2e-09
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 54 2e-09
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 54 2e-09
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 53 3e-09
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 53 3e-09
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 53 4e-09
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 52 5e-09
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 52 5e-09
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 52 6e-09
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 52 6e-09
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 52 6e-09
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 52 9e-09
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 47 2e-07
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 46 4e-07
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 46 4e-07
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 45 7e-07
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 44 2e-06
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 43 3e-06
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 42 5e-06
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 42 5e-06
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 38 9e-05
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 38 1e-04
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 34 0.002
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 34 0.002
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 34 0.002
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 29 0.039
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 27 0.28
DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein. 25 0.85
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 24 2.0
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 7.9
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 59.3 bits (137), Expect = 4e-11
Identities = 48/158 (30%), Positives = 67/158 (42%), Gaps = 9/158 (5%)
Frame = +1
Query: 94 IASAAECENATSLSLMIDSLLATYGRESPPDSK----IVVNLTLHLRHA---NIRESEST 252
I SA C + D LL+ Y R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 253 VRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RAR 426
+ L+ W D + W+ E+G T L V SE +W PD+VL N A G + +A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 427 VSNNGSVSXIXRLDIXXPXSMXLDXWPNDMQTCTFKFG 540
+ G V + + +P D QTC KFG
Sbjct: 127 LHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKFG 164
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 55.2 bits (127), Expect = 7e-10
Identities = 39/152 (25%), Positives = 65/152 (42%), Gaps = 9/152 (5%)
Frame = +1
Query: 112 CENATSLSLMIDSLLATYGRESPPDSKIVVNLTLHLR-------HANIRESESTVRILAD 270
C + D LL+ Y + P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 271 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGS 444
++ +W D +L W+ E+G L V S+ +WRPD+VL NA A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 445 VSXIXRLDIXXPXSMXLDXWPNDMQTCTFKFG 540
V + ++ +P D QTC KFG
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFG 168
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 54.8 bits (126), Expect = 9e-10
Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 2/106 (1%)
Frame = +1
Query: 229 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 402
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 403 GDYALRARVSNNGSVSXIXRLDIXXPXSMXLDXWPNDMQTCTFKFG 540
G Y V++NGS + + + +P D Q C KFG
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFG 198
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 54.8 bits (126), Expect = 9e-10
Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 2/106 (1%)
Frame = +1
Query: 229 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 402
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 403 GDYALRARVSNNGSVSXIXRLDIXXPXSMXLDXWPNDMQTCTFKFG 540
G Y V++NGS + + + +P D Q C KFG
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFG 198
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 54.4 bits (125), Expect = 1e-09
Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 2/106 (1%)
Frame = +1
Query: 229 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 402
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 403 GDYALRARVSNNGSVSXIXRLDIXXPXSMXLDXWPNDMQTCTFKFG 540
G Y V++NGS + + + +P D Q C KFG
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFG 130
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 53.6 bits (123), Expect = 2e-09
Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 2/106 (1%)
Frame = +1
Query: 229 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 402
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 403 GDYALRARVSNNGSVSXIXRLDIXXPXSMXLDXWPNDMQTCTFKFG 540
G Y V+++GS + M + +P D Q C KFG
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFG 130
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 53.6 bits (123), Expect = 2e-09
Identities = 38/148 (25%), Positives = 66/148 (44%), Gaps = 7/148 (4%)
Frame = +1
Query: 118 NATSLSLMIDSLLATYGRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQMNW 285
N +++S ++D+LL Y PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 286 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSXI 456
+D+RL++ G+ + + R+W+PD N + T R+ +G V
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYS 121
Query: 457 XRLDIXXPXSMXLDXWPNDMQTCTFKFG 540
RL I M L+ +P D Q C +FG
Sbjct: 122 SRLTIKAGCPMNLENFPMDTQRCPLQFG 149
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 53.6 bits (123), Expect = 2e-09
Identities = 37/141 (26%), Positives = 66/141 (46%), Gaps = 7/141 (4%)
Frame = +1
Query: 139 MIDSLLATYGRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 303
+ D LL+ Y + P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 304 WNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSXIXRLDIXX 477
W E+G L V S+ +WRPD+VL NA A +A + + G V
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKS 151
Query: 478 PXSMXLDXWPNDMQTCTFKFG 540
+ ++ +P D QTC KFG
Sbjct: 152 SCEIDVEYFPFDEQTCVLKFG 172
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 53.2 bits (122), Expect = 3e-09
Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 2/106 (1%)
Frame = +1
Query: 229 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 402
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 403 GDYALRARVSNNGSVSXIXRLDIXXPXSMXLDXWPNDMQTCTFKFG 540
G Y V+++GS + M + +P D Q C KFG
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFG 130
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 53.2 bits (122), Expect = 3e-09
Identities = 43/165 (26%), Positives = 71/165 (43%), Gaps = 12/165 (7%)
Frame = +1
Query: 82 LTCAIASAAECENATSLSLMIDSLLATYGRESPP----DSKIVVNLTLHLRH---ANIRE 240
++C +A + + D LL+ Y R P ++ V + L L N++
Sbjct: 5 ISCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKN 64
Query: 241 SESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYAL 417
T + ++ W D +L WN ++G T V SE +W PD+VL N A G+Y +
Sbjct: 65 QIMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEV 119
Query: 418 ----RARVSNNGSVSXIXRLDIXXPXSMXLDXWPNDMQTCTFKFG 540
+A + + G V + ++ +P D QTC KFG
Sbjct: 120 TIMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFG 164
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 52.8 bits (121), Expect = 4e-09
Identities = 42/159 (26%), Positives = 70/159 (44%), Gaps = 9/159 (5%)
Frame = +1
Query: 91 AIASAAECENATSLSLMIDSLLATY-------GRESPPDSKIVVNLTLHLRHANIRESES 249
A+A++ + +++ LL TY G ES P + LTL ++ ++ E
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEP-LVLSFGLTL-MQIIDVDEKNQ 68
Query: 250 TVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRA 423
+ L++ W D + WN ++G L + RLW+PDV++ N+A G Y
Sbjct: 69 LLITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNV 128
Query: 424 RVSNNGSVSXIXRLDIXXPXSMXLDXWPNDMQTCTFKFG 540
V NNG+ + + + +P D Q C KFG
Sbjct: 129 VVKNNGTCLYVPPGIFKSTCKIDITWFPFDDQRCEMKFG 167
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 52.4 bits (120), Expect = 5e-09
Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 2/106 (1%)
Frame = +1
Query: 229 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 402
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 403 GDYALRARVSNNGSVSXIXRLDIXXPXSMXLDXWPNDMQTCTFKFG 540
G Y V+++GS + + + +P D Q C KFG
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFG 130
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 52.4 bits (120), Expect = 5e-09
Identities = 42/144 (29%), Positives = 65/144 (45%), Gaps = 10/144 (6%)
Frame = +1
Query: 139 MIDSLLATYGRESPPDSKIVVNLT--LHLRHANIRESESTVRILAD---LQMNWIDKRLS 303
+ D LL+ Y R P LT L L+ + + E +++ ++ W D +L
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVWVEQRWNDYKLK 96
Query: 304 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSXIXRLD 468
WN E+G L V SE +W PD+VL N A G+Y + +A + G VS
Sbjct: 97 WNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSWKPPAI 153
Query: 469 IXXPXSMXLDXWPNDMQTCTFKFG 540
+ ++ +P D Q+C KFG
Sbjct: 154 YKSSCEINVEYFPFDEQSCIMKFG 177
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 52.0 bits (119), Expect = 6e-09
Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 2/106 (1%)
Frame = +1
Query: 229 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 402
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 403 GDYALRARVSNNGSVSXIXRLDIXXPXSMXLDXWPNDMQTCTFKFG 540
G Y V+++GS + + + +P D Q C KFG
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFG 130
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 52.0 bits (119), Expect = 6e-09
Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 2/106 (1%)
Frame = +1
Query: 229 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 402
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 403 GDYALRARVSNNGSVSXIXRLDIXXPXSMXLDXWPNDMQTCTFKFG 540
G Y V+++GS + + + +P D Q C KFG
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFG 130
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 52.0 bits (119), Expect = 6e-09
Identities = 33/123 (26%), Positives = 59/123 (47%), Gaps = 6/123 (4%)
Frame = +1
Query: 190 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWR 363
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 364 PDVVLLNAAATTAGDYALRAR----VSNNGSVSXIXRLDIXXPXSMXLDXWPNDMQTCTF 531
PD+VL N A G+Y +R + + NG V + ++ + +P D QTC
Sbjct: 111 PDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 532 KFG 540
KFG
Sbjct: 168 KFG 170
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 51.6 bits (118), Expect = 9e-09
Identities = 39/144 (27%), Positives = 70/144 (48%), Gaps = 10/144 (6%)
Frame = +1
Query: 139 MIDSLLATYGRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 303
+ D LL+ Y + P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 304 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSXIXRLD 468
W E+G L V S+ +WRPD+VL N A G+Y + +A V +G V
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAV 148
Query: 469 IXXPXSMXLDXWPNDMQTCTFKFG 540
S+ ++ +P D+QTC K G
Sbjct: 149 YKSSCSIDVEFFPYDVQTCVLKLG 172
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 47.2 bits (107), Expect = 2e-07
Identities = 34/147 (23%), Positives = 63/147 (42%), Gaps = 8/147 (5%)
Frame = +1
Query: 112 CENATSLSLMIDS---LLATYGRESPPDSKIV--VNLTLHLRHANIRESESTVRILADLQ 276
C++ TS S + L Y R+ P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 277 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL--LNAAATTAGDYALRARVSNNGSV 447
+ W L+W + E+ ++ V S +W PD+V+ + + ++ V N+G++
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVMHSVTSVGIDLEMPSVECIVFNSGTI 147
Query: 448 SXIXRLDIXXPXSMXLDXWPNDMQTCT 528
+ WP D+ CT
Sbjct: 148 LCVPFTTYTPVCEYDHTWWPYDILNCT 174
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 46.0 bits (104), Expect = 4e-07
Identities = 36/150 (24%), Positives = 63/150 (42%), Gaps = 8/150 (5%)
Frame = +1
Query: 115 ENATSLSLMIDSLLATYGRESPPDS--KIVVNLTLHL--RHANIRESESTVRILADLQMN 282
++ T+L + L Y P S +I N+T+ L + + S + + + + +
Sbjct: 39 DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98
Query: 283 WIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVS 450
W D LSW ++ G + V S+ +W PD+ + N+ T G V ++GSVS
Sbjct: 99 WTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVS 158
Query: 451 XIXRLDIXXPXSMXLDXWPNDMQTCTFKFG 540
+ + + WP D C FG
Sbjct: 159 CVPSVKHVAKCATDFSSWPYDTHRCRINFG 188
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 46.0 bits (104), Expect = 4e-07
Identities = 31/118 (26%), Positives = 48/118 (40%), Gaps = 3/118 (2%)
Frame = +1
Query: 193 IVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 369
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 370 VVLLNAAATTAGDYALRAR--VSNNGSVSXIXRLDIXXPXSMXLDXWPNDMQTCTFKF 537
+L N A + VS+ G V + + ++ +P D Q C K+
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKW 149
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 45.2 bits (102), Expect = 7e-07
Identities = 40/170 (23%), Positives = 71/170 (41%), Gaps = 12/170 (7%)
Frame = +1
Query: 61 IILLPFLLTCAIASAAECENATSLSLMIDSLLATYGR------ESPPDSKIVVNLTLHLR 222
++LL FLL + + + ++D++L Y E+ D +V + L +R
Sbjct: 9 LVLLTFLLHPSRCTQGKVNYREKEKEVLDNILGGYDARIRPSGENATDGPAIVRVNLFVR 68
Query: 223 H-ANIRESESTVRILADLQMNWIDKRLSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAA 393
A I + + + + W+D+RL +N G T L + R+W PD+ N
Sbjct: 69 SIATISDIKMEYSVQLTFREQWLDERLRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKE 127
Query: 394 TTAGDYALR---ARVSNNGSVSXIXRLDIXXPXSMXLDXWPNDMQTCTFK 534
+ + R+ NGSV R+ + M L +P D Q C+ +
Sbjct: 128 GHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVCSLR 177
Score = 22.6 bits (46), Expect = 4.5
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +3
Query: 510 RHADLHVQVRVLGCARGDXLGFP 578
+H +LH+Q R C R FP
Sbjct: 387 QHCELHMQPRKKNCCRSWLSKFP 409
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 43.6 bits (98), Expect = 2e-06
Identities = 38/149 (25%), Positives = 68/149 (45%), Gaps = 13/149 (8%)
Frame = +1
Query: 118 NATSLSLMIDSLLATYGRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 285
N ++S ++DS +Y + P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 286 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 438
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 439 GSVSXIXRLDIXXPXSMXLDXWPNDMQTC 525
GS++ RL I M L +P D Q C
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLC 152
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 43.2 bits (97), Expect = 3e-06
Identities = 34/146 (23%), Positives = 60/146 (41%), Gaps = 8/146 (5%)
Frame = +1
Query: 127 SLSLMIDSLLATYGRESPPD----SKIVVNLTLHLRHAN-IRESESTVRILADLQMNWID 291
++++++++LL Y P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 292 KRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYAL---RARVSNNGSVSXIXR 462
RLS+ S + ER+WRPD N + + R+S +G + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 463 LDIXXPXSMXLDXWPNDMQTCTFKFG 540
L I M L +P D Q+C G
Sbjct: 156 LTIKAKCPMELRNFPMDRQSCPLILG 181
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 42.3 bits (95), Expect = 5e-06
Identities = 39/170 (22%), Positives = 70/170 (41%), Gaps = 12/170 (7%)
Frame = +1
Query: 61 IILLPFLLTCAIASAAECENATSLSLMIDSLLATYGR------ESPPDSKIVVNLTLHLR 222
++LL FLL + + + ++D++L Y E+ D VV + + +R
Sbjct: 9 LVLLTFLLHPSRCTQGKVNYREKEKEVLDNILGGYDARIRPSGENATDGPAVVRVNIFVR 68
Query: 223 H-ANIRESESTVRILADLQMNWIDKRLSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAA 393
+ I + + + W+D+RL +N G T L + R+W PD+ N
Sbjct: 69 SISKIDDVTMEYSVQLTFREQWLDERLRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKE 127
Query: 394 TTAGDYALR---ARVSNNGSVSXIXRLDIXXPXSMXLDXWPNDMQTCTFK 534
+ + R+ NGSV R+ + M L +P D Q C+ +
Sbjct: 128 GHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVCSLR 177
Score = 22.6 bits (46), Expect = 4.5
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +3
Query: 510 RHADLHVQVRVLGCARGDXLGFP 578
+H +LH+Q R C R FP
Sbjct: 387 QHCELHMQPRKKNCCRSWLSKFP 409
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 42.3 bits (95), Expect = 5e-06
Identities = 38/149 (25%), Positives = 67/149 (44%), Gaps = 13/149 (8%)
Frame = +1
Query: 118 NATSLSLMIDSLLATYGRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 285
N ++S ++DS +Y + P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 286 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 438
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 439 GSVSXIXRLDIXXPXSMXLDXWPNDMQTC 525
GS++ RL I M L +P D Q C
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLC 152
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 38.3 bits (85), Expect = 9e-05
Identities = 29/102 (28%), Positives = 42/102 (41%), Gaps = 3/102 (2%)
Frame = +1
Query: 232 IRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDY 411
I E I L W D+RL+++ E + +E++W PD N + D
Sbjct: 75 ISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 134
Query: 412 ALR---ARVSNNGSVSXIXRLDIXXPXSMXLDXWPNDMQTCT 528
R R+S +GSV+ R M L +P D Q CT
Sbjct: 135 TERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCT 176
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 37.5 bits (83), Expect = 1e-04
Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Frame = +1
Query: 283 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 435
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 436 NGSVSXIXRLDIXXPXSMXLDXWPNDMQTC 525
+GS++ RL I M L +P D Q C
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLC 91
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 33.9 bits (74), Expect = 0.002
Identities = 40/169 (23%), Positives = 69/169 (40%), Gaps = 10/169 (5%)
Frame = +1
Query: 55 TYIILLPFLLTCAIASAAE--CENATSLSLMIDSLLAT--YGRE--SPPDSKIVVNLT-L 213
T + +L LT AE E+ S ++D+LL + Y + P + VN++ L
Sbjct: 34 TILCILTLALTLVTLVRAEDIFEDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVL 93
Query: 214 HLRHANIRESESTVRILADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLN 384
L A+ ES + LQ W D RL + N ++ + + +W PD ++
Sbjct: 94 LLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHG 153
Query: 385 AAATTAGDYALRARVSNNGSVSXIXRLDIXXPXSMXLDXWPNDMQTCTF 531
R+ NG+V+ + R + L+ +P D C+F
Sbjct: 154 DFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSF 202
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 33.9 bits (74), Expect = 0.002
Identities = 40/169 (23%), Positives = 69/169 (40%), Gaps = 10/169 (5%)
Frame = +1
Query: 55 TYIILLPFLLTCAIASAAE--CENATSLSLMIDSLLAT--YGRE--SPPDSKIVVNLT-L 213
T + +L LT AE E+ S ++D+LL + Y + P + VN++ L
Sbjct: 34 TILCILTLALTLVTLVRAEDIFEDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVL 93
Query: 214 HLRHANIRESESTVRILADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLN 384
L A+ ES + LQ W D RL + N ++ + + +W PD ++
Sbjct: 94 LLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHG 153
Query: 385 AAATTAGDYALRARVSNNGSVSXIXRLDIXXPXSMXLDXWPNDMQTCTF 531
R+ NG+V+ + R + L+ +P D C+F
Sbjct: 154 DFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSF 202
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 33.9 bits (74), Expect = 0.002
Identities = 40/169 (23%), Positives = 69/169 (40%), Gaps = 10/169 (5%)
Frame = +1
Query: 55 TYIILLPFLLTCAIASAAE--CENATSLSLMIDSLLAT--YGRE--SPPDSKIVVNLT-L 213
T + +L LT AE E+ S ++D+LL + Y + P + VN++ L
Sbjct: 34 TILCILTLALTLVTLVRAEDIFEDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVL 93
Query: 214 HLRHANIRESESTVRILADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLN 384
L A+ ES + LQ W D RL + N ++ + + +W PD ++
Sbjct: 94 LLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHG 153
Query: 385 AAATTAGDYALRARVSNNGSVSXIXRLDIXXPXSMXLDXWPNDMQTCTF 531
R+ NG+V+ + R + L+ +P D C+F
Sbjct: 154 DFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSF 202
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 29.5 bits (63), Expect = 0.039
Identities = 27/117 (23%), Positives = 48/117 (41%), Gaps = 4/117 (3%)
Frame = +1
Query: 193 IVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRP 366
+ VN++ L L A+ ES + LQ W D RL + N ++ + + +W P
Sbjct: 137 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 196
Query: 367 DV--VLLNAAATTAGDYALRARVSNNGSVSXIXRLDIXXPXSMXLDXWPNDMQTCTF 531
D ++ R+ NG+V+ + R + L+ +P D C+F
Sbjct: 197 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSF 253
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 26.6 bits (56), Expect = 0.28
Identities = 27/122 (22%), Positives = 50/122 (40%), Gaps = 11/122 (9%)
Frame = +1
Query: 193 IVVNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLS-----WNAGEWGCSTWLVSSER 354
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 355 LWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSXIXRLDIXXPXSMXLDXWPNDMQ 519
LW+PD LNA + AL + S+ N +V R+ M +P D+Q
Sbjct: 71 LWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMDIQ 128
Query: 520 TC 525
C
Sbjct: 129 IC 130
>DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein.
Length = 145
Score = 25.0 bits (52), Expect = 0.85
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 58 YIILLPFLLTCAIAS-AAECENATSLSLMIDSLLAT 162
Y ILL L+TC I S + C T S + D ++AT
Sbjct: 3 YSILLSLLITCLICSPSVHC--GTRPSFVSDEMIAT 36
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 23.8 bits (49), Expect = 2.0
Identities = 13/62 (20%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Frame = +1
Query: 349 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSXIXRLDIXXPXSMXLDXWPNDMQ 519
+ +WRPD NA + T + + + ++ + +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 520 TC 525
C
Sbjct: 176 EC 177
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 7.9
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -2
Query: 336 PSAAAPFPCVPTQS 295
PSA AP P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,128
Number of Sequences: 438
Number of extensions: 4274
Number of successful extensions: 81
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26338809
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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