Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_FL5_J06
(748 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 36 0.005
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 32 0.076
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 31 0.17
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 30 0.40
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 29 0.70
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 27 3.8
SPAC26A3.08 |smb1|smb|Sm snRNP core protein Smb1|Schizosaccharom... 26 5.0
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 26 6.6
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 22 7.3
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 36.3 bits (80), Expect = 0.005
Identities = 17/40 (42%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Frame = +2
Query: 407 PXPXXXXNP-PPPPPXXXXXXPPPPXXGGPGXXPXPPXXP 523
P P P PPP P PPPP G G P PP P
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 33.9 bits (74), Expect = 0.025
Identities = 16/40 (40%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Frame = +2
Query: 407 PXPXXXXNPPPPP-PXXXXXXPPPPXXGGPGXXPXPPXXP 523
P P PPP P PPPP G G P PP P
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 32.3 bits (70), Expect = 0.076
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +2
Query: 407 PXPXXXXNPPPPPPXXXXXXPPPPXXGGPGXXPXPP 514
P P P P P PP P GGP P PP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPP 768
Score = 27.9 bits (59), Expect = 1.6
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +2
Query: 638 PPXPPXXXXXPXLXXXPXXXXGXAXXPXGXPPPXPSP 748
PP PP P P A G PPP P P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPP 768
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 32.3 bits (70), Expect = 0.076
Identities = 27/109 (24%), Positives = 28/109 (25%), Gaps = 2/109 (1%)
Frame = +3
Query: 426 GTPPPP--PPXXXXGPPPPPXRGXXGXXPXXPXXXXXXXPXXXXRPXXXXXXSXXXXXXA 599
G PPP PP PP P P P
Sbjct: 373 GRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLP 432
Query: 600 PXXPXXXPXXSXSPPXPPXXXXXPXXXXXPXXRXGAXXXPXAAPPPSPA 746
P P P + P PP P P A P AAP P PA
Sbjct: 433 PSAPPSLPMGA--PAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPA 479
Score = 32.3 bits (70), Expect = 0.076
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +2
Query: 407 PXPXXXXNPPPPPPXXXXXXPPPPXXGGPGXXPXPPXXP 523
P P PP PP PP G P P PP P
Sbjct: 416 PVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAP 454
Score = 30.3 bits (65), Expect = 0.30
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +2
Query: 431 PPPPPPXXXXXXPPPPXXGGPGXXPXPPXXP 523
PPPPPP PP G PP P
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPP 341
Score = 30.3 bits (65), Expect = 0.30
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = +2
Query: 431 PPPPPPXXXXXXPPPPXXGGPGXXPXPPXXPXXXXAXXXXP 553
PPPPPP PP G PP P A P
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIP 352
Score = 28.7 bits (61), Expect = 0.93
Identities = 24/93 (25%), Positives = 24/93 (25%)
Frame = +3
Query: 465 PPPPPXRGXXGXXPXXPXXXXXXXPXXXXRPXXXXXXSXXXXXXAPXXPXXXPXXSXSPP 644
PPPPP R G P P P S P S PP
Sbjct: 313 PPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSI---------PLPPQGRSAPPP 363
Query: 645 XPPXXXXXPXXXXXPXXRXGAXXXPXAAPPPSP 743
PP P A P A PP P
Sbjct: 364 PPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIP 396
Score = 28.7 bits (61), Expect = 0.93
Identities = 25/114 (21%), Positives = 27/114 (23%), Gaps = 2/114 (1%)
Frame = +2
Query: 413 PXXXXNPPPPPPXXXXXXPP--PPXXGGPGXXPXPPXXPXXXXAXXXXPXXAXRXXXXXX 586
P PPP PP PP G PP + P
Sbjct: 370 PSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPP 429
Query: 587 XXXXPXXPXXXTXXXXLPPXPPXXXXXPXLXXXPXXXXGXAXXPXGXPPPXPSP 748
P PP PP P L P P P P P+P
Sbjct: 430 SLPPSAPPSLPMGAPAAPPLPPSAPIAPPL---PAGMPAAPPLPPAAPAPPPAP 480
Score = 27.9 bits (59), Expect = 1.6
Identities = 25/105 (23%), Positives = 27/105 (25%)
Frame = +3
Query: 432 PPPPPPXXXXGPPPPPXRGXXGXXPXXPXXXXXXXPXXXXRPXXXXXXSXXXXXXAPXXP 611
P PPP P P G P P P AP P
Sbjct: 389 PAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAP-PSLPPSAPPSLPMGAPAAP 447
Query: 612 XXXPXXSXSPPXPPXXXXXPXXXXXPXXRXGAXXXPXAAPPPSPA 746
P +PP P P A P AP P+PA
Sbjct: 448 PLPPSAPIAPPLPAGMPAAPPLPP-------AAPAPPPAPAPAPA 485
Score = 26.6 bits (56), Expect = 3.8
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +3
Query: 432 PPPPPPXXXXGPPPPPXRGXXGXXPXXP 515
PPPPP G P P +G P P
Sbjct: 339 PPPPPRSNAAGSIPLPPQGRSAPPPPPP 366
Score = 25.8 bits (54), Expect = 6.6
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +2
Query: 431 PPPPPPXXXXXXPPPPXXGGPGXXPXPP 514
PPPPPP P G P PP
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAPPPPP 365
Score = 25.8 bits (54), Expect = 6.6
Identities = 10/26 (38%), Positives = 10/26 (38%)
Frame = +2
Query: 437 PPPPXXXXXXPPPPXXGGPGXXPXPP 514
P PP PPPP P PP
Sbjct: 352 PLPPQGRSAPPPPPPRSAPSTGRQPP 377
Score = 25.8 bits (54), Expect = 6.6
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +2
Query: 437 PPPPXXXXXXPPPPXXGGPGXXPXPPXXPXXXXAXXXXP 553
PP P PP P G P P PP P A P
Sbjct: 447 PPLPPSAPIAPPLPA-GMPAAPPLPPAAPAPPPAPAPAP 484
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 31.1 bits (67), Expect = 0.17
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +2
Query: 407 PXPXXXXNPPPPPPXXXXXXPPPPXXGGPGXXPXPP 514
P PPPPP PP GP P PP
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 29.9 bits (64), Expect = 0.40
Identities = 12/20 (60%), Positives = 12/20 (60%), Gaps = 2/20 (10%)
Frame = +3
Query: 426 GTPPPPPPXXXXGPP--PPP 479
G PPPPPP PP PPP
Sbjct: 7 GNPPPPPPPPGFEPPSQPPP 26
Score = 27.5 bits (58), Expect = 2.1
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +2
Query: 413 PXXXXNPPPPPPXXXXXXPPPPXXGG 490
P PPPPP PPPP G
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPPG 31
Score = 27.5 bits (58), Expect = 2.1
Identities = 12/24 (50%), Positives = 12/24 (50%), Gaps = 1/24 (4%)
Frame = +2
Query: 428 NPPPPPPXXXXXXP-PPPXXGGPG 496
NPPPPPP P PP PG
Sbjct: 8 NPPPPPPPPGFEPPSQPPPPPPPG 31
Score = 27.1 bits (57), Expect = 2.8
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -3
Query: 383 PXPPXDXGGKXXXQXXPPPPPXXGXKK 303
P PP G + Q PPPPP K+
Sbjct: 10 PPPPPPPGFEPPSQPPPPPPPGYVKKR 36
Score = 26.2 bits (55), Expect = 5.0
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +2
Query: 443 PPXXXXXXPPPPXXGGPGXXPXPP 514
PP PPPP P P PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPP 28
Score = 25.4 bits (53), Expect = 8.7
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +2
Query: 431 PPPPPPXXXXXXPPPPXXGGPGXXPXPPXXP 523
PP PP PPPP P P PP P
Sbjct: 5 PPGNPP-----PPPPPPGFEPPSQPPPPPPP 30
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 29.1 bits (62), Expect = 0.70
Identities = 20/55 (36%), Positives = 20/55 (36%)
Frame = -2
Query: 522 GXXGGXGXXPGPPXXGGGGXXXXXXGGGGGGFXXXXGXGXXXKKXXPXPPXGXGG 358
G GG G PG G GG GGG GGF G P G GG
Sbjct: 221 GGHGGFGGGPGGFEGGPGG-----FGGGPGGFGGGLGGFGGGPGGFGGGPGGHGG 270
Score = 26.2 bits (55), Expect = 5.0
Identities = 18/54 (33%), Positives = 18/54 (33%), Gaps = 2/54 (3%)
Frame = -2
Query: 513 GGXGXXPGPPXXGGGGXXXXXXG--GGGGGFXXXXGXGXXXKKXXPXPPXGXGG 358
G G PGP GG G GG GGF G P G GG
Sbjct: 196 GSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGG 249
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 26.6 bits (56), Expect = 3.8
Identities = 24/105 (22%), Positives = 24/105 (22%), Gaps = 1/105 (0%)
Frame = +2
Query: 434 PPPPPXXXXXXPPPPXXGGPGXXPXPPXXPXXXXAXXXXPXXAXRXXXXXXXXXXPXXPX 613
PPP P P P G P P P P P
Sbjct: 1063 PPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPP 1122
Query: 614 XXTXXXXLPPXPPXXXXXPXLXXXPXXXXGXAXXPXGXPP-PXPS 745
PP P P P P G PP P PS
Sbjct: 1123 VPKPSVAAPPVPVPSGAPP--VPKPSVAAPPVPAPSGAPPVPKPS 1165
Score = 26.6 bits (56), Expect = 3.8
Identities = 30/120 (25%), Positives = 32/120 (26%), Gaps = 7/120 (5%)
Frame = +3
Query: 408 PXXXXXGTPPPPPPXXXXGPPP------PPXRGXXGXXP-XXPXXXXXXXPXXXXRPXXX 566
P G PP P P P P PP G P P P P
Sbjct: 1084 PVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVP 1143
Query: 567 XXXSXXXXXXAPXXPXXXPXXSXSPPXPPXXXXXPXXXXXPXXRXGAXXXPXAAPPPSPA 746
AP P S + P P P P + A P PPPS A
Sbjct: 1144 KPSVAAPPVPAPSGAPPVPKPSVAAPPVP----APSSGIPPVPKPAAGVPP--VPPPSEA 1197
Score = 26.6 bits (56), Expect = 3.8
Identities = 27/116 (23%), Positives = 29/116 (25%), Gaps = 2/116 (1%)
Frame = +2
Query: 407 PXPXXXXNPPPPPPXXXXXXPPPPXXGGPGXXPXPP-XXPXXXXAXXXXPXXAXRXXXXX 583
P P PP P P PP P G P P P P
Sbjct: 1113 PVPAPSGAPPVPKP--SVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPP 1170
Query: 584 XXXXXPXXPXXXTXXXXLPPXPPXXXXXPXLXXXPXXXXG-XAXXPXGXPPPXPSP 748
P +PP PP P P G P PP P+P
Sbjct: 1171 VPAPSSGIPPVPKPAAGVPPVPPPSEAPP----VPKPSVGVPPVPPPSTAPPVPTP 1222
>SPAC26A3.08 |smb1|smb|Sm snRNP core protein
Smb1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 147
Score = 26.2 bits (55), Expect = 5.0
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 429 TPPPPPPXXXXGPPPPPXR 485
T PPPP G PPP R
Sbjct: 127 TAPPPPAGFGRGAPPPGFR 145
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 25.8 bits (54), Expect = 6.6
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +2
Query: 413 PXXXXNPPPPPPXXXXXXPPPPXXGGPGXXPXPP 514
P PPP PPPP PG PP
Sbjct: 203 PGEHMPPPPMHHKPGEHMPPPPMHHEPGEHMPPP 236
Score = 25.8 bits (54), Expect = 6.6
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +2
Query: 413 PXXXXNPPPPPPXXXXXXPPPPXXGGPGXXPXPP 514
P PPP PPPP PG PP
Sbjct: 216 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 249
Score = 25.8 bits (54), Expect = 6.6
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +2
Query: 413 PXXXXNPPPPPPXXXXXXPPPPXXGGPGXXPXPP 514
P PPP PPPP PG PP
Sbjct: 229 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 262
Score = 25.8 bits (54), Expect = 6.6
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +2
Query: 413 PXXXXNPPPPPPXXXXXXPPPPXXGGPGXXPXPP 514
P PPP PPPP PG PP
Sbjct: 242 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 275
Score = 25.8 bits (54), Expect = 6.6
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +2
Query: 413 PXXXXNPPPPPPXXXXXXPPPPXXGGPGXXPXPP 514
P PPP PPPP PG PP
Sbjct: 255 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 288
Score = 25.8 bits (54), Expect = 6.6
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +2
Query: 413 PXXXXNPPPPPPXXXXXXPPPPXXGGPGXXPXPP 514
P PPP PPPP PG PP
Sbjct: 268 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 301
Score = 25.8 bits (54), Expect = 6.6
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +2
Query: 413 PXXXXNPPPPPPXXXXXXPPPPXXGGPGXXPXPP 514
P PPP PPPP PG PP
Sbjct: 281 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 314
Score = 25.8 bits (54), Expect = 6.6
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +2
Query: 413 PXXXXNPPPPPPXXXXXXPPPPXXGGPGXXPXPP 514
P PPP PPPP PG PP
Sbjct: 294 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 327
Score = 25.8 bits (54), Expect = 6.6
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +2
Query: 413 PXXXXNPPPPPPXXXXXXPPPPXXGGPGXXPXPP 514
P PPP PPPP PG PP
Sbjct: 307 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 340
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 22.2 bits (45), Expect(2) = 7.3
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 430 PPPPPPXL 453
PPPPPP L
Sbjct: 947 PPPPPPPL 954
Score = 21.4 bits (43), Expect(2) = 7.3
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +1
Query: 412 PXXGXEPPPPPP 447
P PPPPPP
Sbjct: 942 PAFPPPPPPPPP 953
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.313 0.155 0.578
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,621,830
Number of Sequences: 5004
Number of extensions: 26280
Number of successful extensions: 356
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 142
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 355273338
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
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