Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_FL5_J02
(790 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69902-7|CAA93769.1| 618|Caenorhabditis elegans Hypothetical pr... 33 0.31
AB023424-1|BAA82800.1| 618|Caenorhabditis elegans kel-1 protein. 33 0.31
Z32681-3|CAD88217.1| 685|Caenorhabditis elegans Hypothetical pr... 31 0.94
Z32681-2|CAA83607.1| 687|Caenorhabditis elegans Hypothetical pr... 31 0.94
AF173373-1|AAD51973.1| 687|Caenorhabditis elegans transmembrane... 31 0.94
Z81544-9|CAI79252.1| 231|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z30662-10|CAI58651.1| 409|Caenorhabditis elegans Hypothetical p... 28 6.6
Z30662-9|CAA83138.2| 451|Caenorhabditis elegans Hypothetical pr... 28 6.6
AF067219-16|AAC17022.1| 531|Caenorhabditis elegans Hypothetical... 28 8.8
>Z69902-7|CAA93769.1| 618|Caenorhabditis elegans Hypothetical
protein C47D12.7 protein.
Length = 618
Score = 32.7 bits (71), Expect = 0.31
Identities = 10/25 (40%), Positives = 20/25 (80%)
Frame = +2
Query: 488 VEDVDADALRELVEYAYTGRVRVKD 562
+++VD + L +L++Y YTGR+R+ +
Sbjct: 114 IKEVDVEVLSQLIDYMYTGRMRIDE 138
>AB023424-1|BAA82800.1| 618|Caenorhabditis elegans kel-1 protein.
Length = 618
Score = 32.7 bits (71), Expect = 0.31
Identities = 10/25 (40%), Positives = 20/25 (80%)
Frame = +2
Query: 488 VEDVDADALRELVEYAYTGRVRVKD 562
+++VD + L +L++Y YTGR+R+ +
Sbjct: 114 IKEVDVEVLSQLIDYMYTGRMRIDE 138
>Z32681-3|CAD88217.1| 685|Caenorhabditis elegans Hypothetical
protein F56F3.2b protein.
Length = 685
Score = 31.1 bits (67), Expect = 0.94
Identities = 23/66 (34%), Positives = 32/66 (48%)
Frame = -1
Query: 253 TAFFAFAVFLSSIAIPVVALRSHLGKVPRYSCPVMTL*SLDRRYYLTTVIRLRTLRFLRL 74
T FA+ VF SSI V R++ ++P P++TL + +L F R
Sbjct: 442 TQLFAYTVFGSSIIFSFV--RAYSQELP--PAPMLTLEPVPLTKVYAVFDQLLLSLFARS 497
Query: 73 SNYCLG 56
SNYCLG
Sbjct: 498 SNYCLG 503
>Z32681-2|CAA83607.1| 687|Caenorhabditis elegans Hypothetical
protein F56F3.2a protein.
Length = 687
Score = 31.1 bits (67), Expect = 0.94
Identities = 23/66 (34%), Positives = 32/66 (48%)
Frame = -1
Query: 253 TAFFAFAVFLSSIAIPVVALRSHLGKVPRYSCPVMTL*SLDRRYYLTTVIRLRTLRFLRL 74
T FA+ VF SSI V R++ ++P P++TL + +L F R
Sbjct: 442 TQLFAYTVFGSSIIFSFV--RAYSQELP--PAPMLTLEPVPLTKVYAVFDQLLLSLFARS 497
Query: 73 SNYCLG 56
SNYCLG
Sbjct: 498 SNYCLG 503
>AF173373-1|AAD51973.1| 687|Caenorhabditis elegans transmembrane
protein NDG-4 protein.
Length = 687
Score = 31.1 bits (67), Expect = 0.94
Identities = 23/66 (34%), Positives = 32/66 (48%)
Frame = -1
Query: 253 TAFFAFAVFLSSIAIPVVALRSHLGKVPRYSCPVMTL*SLDRRYYLTTVIRLRTLRFLRL 74
T FA+ VF SSI V R++ ++P P++TL + +L F R
Sbjct: 442 TQLFAYTVFGSSIIFSFV--RAYSQELP--PAPMLTLEPVPLTKVYAVFDQLLLSLFARS 497
Query: 73 SNYCLG 56
SNYCLG
Sbjct: 498 SNYCLG 503
>Z81544-9|CAI79252.1| 231|Caenorhabditis elegans Hypothetical
protein F49C5.10 protein.
Length = 231
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -1
Query: 616 RLDTQPPGGTIQSPGRERIFDPNSTGVSVFHKFP 515
++D PPG TI P + P ST VS+ FP
Sbjct: 165 QIDCSPPGNTICFPTGLKAITPTSTSVSIGTDFP 198
>Z30662-10|CAI58651.1| 409|Caenorhabditis elegans Hypothetical
protein T16H12.5b protein.
Length = 409
Score = 28.3 bits (60), Expect = 6.6
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = +2
Query: 488 VEDVDADALRELVEYAYTGRVR 553
V+D++ + +REL+ Y YTG+ +
Sbjct: 272 VDDIEPEVMRELLVYMYTGQTK 293
>Z30662-9|CAA83138.2| 451|Caenorhabditis elegans Hypothetical
protein T16H12.5a protein.
Length = 451
Score = 28.3 bits (60), Expect = 6.6
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = +2
Query: 488 VEDVDADALRELVEYAYTGRVR 553
V+D++ + +REL+ Y YTG+ +
Sbjct: 314 VDDIEPEVMRELLVYMYTGQTK 335
>AF067219-16|AAC17022.1| 531|Caenorhabditis elegans Hypothetical
protein R12E2.1 protein.
Length = 531
Score = 27.9 bits (59), Expect = 8.8
Identities = 18/87 (20%), Positives = 30/87 (34%)
Frame = +2
Query: 305 LSALNALRKSRQHYDAVLVAGGTEVXXXXXXXXXXSPYLLEALXXXXXXXXXXXXXXXXY 484
L L L+ D L+ G + SPY L
Sbjct: 43 LQQLGGLKNRDVLCDVTLICGWKRINAHRVVLSACSPYFLSMFTSQMAECYMREI----- 97
Query: 485 RVEDVDADALRELVEYAYTGRVRVKDT 565
+E+++ L L+E+ YTG + + D+
Sbjct: 98 NMEEIEPPTLEALIEFCYTGAIAIDDS 124
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,721,160
Number of Sequences: 27780
Number of extensions: 318084
Number of successful extensions: 1110
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1110
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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