Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_FL5_I15
(809 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.01 ||SPCC1906.05|zf-CCCH type zinc finger protein|Schiz... 29 1.0
SPAC6G9.11 |syb1||synaptobrevin |Schizosaccharomyces pombe|chr 1... 27 2.4
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 26 7.3
SPCC330.04c |mug135||DUF1773 family protein 3|Schizosaccharomyce... 26 7.3
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 26 7.3
SPAC4F10.07c |atg13|apg13, mug78|autophagy associated protein At... 25 9.6
SPAC56E4.06c |ggt2||gamma-glutamyltranspeptidase Ggt2|Schizosacc... 25 9.6
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 25 9.6
>SPCC1739.01 ||SPCC1906.05|zf-CCCH type zinc finger
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 547
Score = 28.7 bits (61), Expect = 1.0
Identities = 28/76 (36%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Frame = +3
Query: 276 TGTETKSNSVTV-QSLPNVS--SIIKGYRDAYPVNLEAVVFPSAPSLKIPVTVDLCWTTA 446
TG +T+ QSL N+S S I R N A FPS S +P VDL
Sbjct: 308 TGVSLSRPRLTLDQSLGNLSLGSGINQRRQVPRSNSYAGAFPSVVSASLPTKVDLN-HQM 366
Query: 447 DVTVEGVNVLATPSSS 494
DV+ E L+TP S
Sbjct: 367 DVSDEEQRFLSTPLGS 382
>SPAC6G9.11 |syb1||synaptobrevin |Schizosaccharomyces pombe|chr
1|||Manual
Length = 121
Score = 27.5 bits (58), Expect = 2.4
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -2
Query: 523 IRARPPIVMREDEGVASTLTPSTVTSAVVQQRSTVTGILR 404
I A P +R AS+ TP+ T+A+ QQ GI+R
Sbjct: 9 IPAEPSAAVRSGNAAASS-TPNMKTAAIQQQIDDTVGIMR 47
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 25.8 bits (54), Expect = 7.3
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = -2
Query: 508 PIVMREDEGVASTLTPSTVTSAVVQQRSTVTGILRLGAEGKTTAS 374
P ++E + TL +T+T V + + +L++ AEGK TAS
Sbjct: 507 PEEIKERIAIPKTLI-ATITLPDVSPNAKIELVLQIDAEGKLTAS 550
>SPCC330.04c |mug135||DUF1773 family protein 3|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 357
Score = 25.8 bits (54), Expect = 7.3
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -3
Query: 99 GVWKKRKH*PRREWPKRQKRXKAQF 25
G WKK + + EW K ++ KA++
Sbjct: 119 GEWKKAREEDKAEWKKAREEDKAEW 143
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 25.8 bits (54), Expect = 7.3
Identities = 27/117 (23%), Positives = 45/117 (38%), Gaps = 4/117 (3%)
Frame = +3
Query: 288 TKSNSVTVQSLPNVSSIIKGYRDAYP--VNLEAVVFPSAPSLKIPVTVDLCWTTADVTVE 461
T +N T S+P S+ + A +V + S P P+T C T+ +
Sbjct: 423 TTTNCTTSTSVPYTSTPVTSTPLATTNCTTSTSVPYTSTPVTSTPLTTTNCTTSTSIPYT 482
Query: 462 GVNVLATPSSSRITIGGLALMHQATLPCDLGLHQPDHQIPEFHTP--TTPDLTSISI 626
V +TP ++ ++ + +T P + P TP TT TS S+
Sbjct: 483 STPVTSTPLTTTNCTTSTSVPYTST-PVTSSNYTISSSTPVTSTPVTTTNCTTSTSV 538
Score = 25.8 bits (54), Expect = 7.3
Identities = 27/119 (22%), Positives = 43/119 (36%), Gaps = 2/119 (1%)
Frame = +3
Query: 276 TGTETKSNSVTVQSLPNVSSIIKGYRDAYPVNLEAVVFPSAPSLKIPVTVDLCWTTADVT 455
T T S +T + +S+ Y + + S P PVT C T+ V
Sbjct: 482 TSTPVTSTPLTTTNCTTSTSV--PYTSTPVTSSNYTISSSTPVTSTPVTTTNCTTSTSVL 539
Query: 456 VEGVNVLATPSSSRITIGGLALMHQATLPCDLGLHQPDHQIPEFHTP--TTPDLTSISI 626
V +TP ++ ++ + +T P + P TP TT TS S+
Sbjct: 540 YTSTPVTSTPLATTNCTTSTSVPYTST-PVTSSNYTISSSTPVTSTPVTTTNCTTSTSV 597
>SPAC4F10.07c |atg13|apg13, mug78|autophagy associated protein Atg13
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 758
Score = 25.4 bits (53), Expect = 9.6
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +2
Query: 515 RPYASSHPPLRSRATSTRSSNPRIPYTNHPRLNIHFH 625
R ++SS P R R S S N R+P NHP +I H
Sbjct: 424 RRFSSSFGP-RERKESFSSRN-RLPLVNHPIRSIFKH 458
>SPAC56E4.06c |ggt2||gamma-glutamyltranspeptidase
Ggt2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 611
Score = 25.4 bits (53), Expect = 9.6
Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +3
Query: 252 FQRLYFDLTGTETKSNSVTVQSLPNVS-SIIKGYR--DAYPVNLEAVVFPSAPSLKI 413
+ ++ D T + + V +LP ++I+G D YP+N ++ FP L++
Sbjct: 298 YSTVFADALHTSYRGHDVYTCTLPTSGPALIEGLNILDGYPLNTPSLAFPKRLHLEV 354
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 25.4 bits (53), Expect = 9.6
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 541 PAISGYINPIIKSPNSIHQPPQT*HP 618
P+ SG P + +PNS+ PP + P
Sbjct: 148 PSASGVNAPTVSAPNSMVSPPPSFQP 173
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,971,791
Number of Sequences: 5004
Number of extensions: 56867
Number of successful extensions: 214
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 210
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 394431430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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