Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP09_FL5_I08
         (923 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866...    29   6.9  
01_01_0082 + 625198-625719                                             28   9.1  

>09_06_0277 -
           21983049-21983080,21983250-21984788,21986619-21986655,
           21987612-21987665,21987781-21987893,21988272-21988660,
           21988783-21988903,21989245-21989342,21989963-21990153
          Length = 857

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 14/53 (26%), Positives = 19/53 (35%)
 Frame = -1

Query: 398 PPPXXEKXPXFXFXXPQXPPXKKXXCXSPXGVFFFPPXXFXQKXPXSXXGGGG 240
           PP    + P +    P+  P        P G+   PP    +  P    GGGG
Sbjct: 696 PPQYAPQPPSYVPSPPEYAPEPPVYAPYPPGITPSPPEYAPEPPPGPPGGGGG 748


>01_01_0082 + 625198-625719
          Length = 173

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 22/84 (26%), Positives = 26/84 (30%)
 Frame = -1

Query: 404 TPPPPXXEKXPXFXFXXPQXPPXKKXXCXSPXGVFFFPPXXFXQKXPXSXXGGGGXXXXK 225
           +PPPP     P +    P  PP       SP  V + PP       P    GGGG     
Sbjct: 52  SPPPPDVLPTPVYY---PPPPPVYYPP-PSPPPVAYPPPTTPSTNCPPPPYGGGGYNPTP 107

Query: 224 KKNKKKKXGXXPXXEXFPXKTPHF 153
             N        P     P   P +
Sbjct: 108 SYNPTPGYNPTPSGWFTPPNMPSY 131


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,995,149
Number of Sequences: 37544
Number of extensions: 393096
Number of successful extensions: 576
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 400
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 542
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2635816500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)