Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP09_FL5_I07
         (784 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    29   0.049
AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    23   3.2  
AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    23   4.2  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   4.2  

>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 29.1 bits (62), Expect = 0.049
 Identities = 15/23 (65%), Positives = 17/23 (73%)
 Frame = +1

Query: 346 SEGCETRGRTVRTPSVVVSDYSD 414
           S+  + R R  RTPSVVVSDYSD
Sbjct: 273 SDHNDGRLRYWRTPSVVVSDYSD 295


>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = -2

Query: 459 PQPIHFFFCSTHCNSIRVVADNDTGRPDRTASC 361
           P+PI  + C   C+S   V+ +   + +R+  C
Sbjct: 45  PKPIPSYACRGRCSSYLQVSGSKIWQMERSCMC 77


>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = +1

Query: 337 RRGSEGCETRGRTVRTPSVVVSDYSDGVAVGATEEE 444
           RRGS+G +   R  R+PS  +     G ++  ++ +
Sbjct: 90  RRGSDGSQLAMRNDRSPSYSMQVPQQGASIDDSDPD 125


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = +1

Query: 337 RRGSEGCETRGRTVRTPSVVVSDYSDGVAVGATEEE 444
           RRGS+G +   R  R+PS  +     G ++  ++ +
Sbjct: 538 RRGSDGSQLAMRNDRSPSYSMQVPQQGASIDDSDPD 573


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,725
Number of Sequences: 438
Number of extensions: 2080
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24639531
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)