Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_FL5_I04
(812 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 80 3e-16
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 42 1e-04
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 40 6e-04
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 34 0.028
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c... 33 0.048
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 31 0.19
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 31 0.19
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 30 0.34
SPAC890.03 |ppk16|mug92|serine/threonine protein kinase Ppk16 |S... 29 0.59
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 29 0.79
SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyce... 28 1.8
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 28 1.8
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 27 2.4
SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier homolog|Schizosaccha... 27 3.2
SPAC19G12.02c |pms1||MutL family mismatch-repair protein Pms1|Sc... 26 7.3
SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1 |Schizosacc... 26 7.3
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 80.2 bits (189), Expect = 3e-16
Identities = 38/74 (51%), Positives = 50/74 (67%)
Frame = +2
Query: 425 GLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXXXXXXXXX 604
G++S WRGN ANV+RYFPTQALNFAFKDK+K++F G ++ + ++F
Sbjct: 86 GVISLWRGNTANVLRYFPTQALNFAFKDKFKKMF-GYKKERDGYAKWFAGNLASGGAAGA 144
Query: 605 TSLCFVYPLDFART 646
SL FVY LD+ART
Sbjct: 145 ASLLFVYSLDYART 158
Score = 61.3 bits (142), Expect = 2e-10
Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Frame = +1
Query: 250 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQG 426
F DF+ GG+SAAVSKTA APIERVKLL+Q Q + + RYKGI + F R E+G
Sbjct: 27 FFFDFMMGGVSAAVSKTAAAPIERVKLLIQNQDEMIRAGRLSHRYKGIGECFKRTAAEEG 86
Score = 58.0 bits (134), Expect = 1e-09
Identities = 29/56 (51%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Frame = +1
Query: 646 RLAADV--GKGDGQREFSGLGNCISKIFKSDGLIGLYXXFGVSVQGIIIYRXSYFG 807
RLA D K G+R+F+GL + K ++SDGL GLY FG SV GI++YR YFG
Sbjct: 159 RLANDAKSAKKGGERQFNGLVDVYRKTYRSDGLRGLYRGFGPSVVGIVVYRGLYFG 214
Score = 25.8 bits (54), Expect = 7.3
Identities = 13/59 (22%), Positives = 28/59 (47%)
Frame = +1
Query: 250 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQG 426
FA + +GG + A S V ++ + L S + ++++ G+VD + + + G
Sbjct: 132 FAGNLASGGAAGAASLLFVYSLDYARTRLANDAKSAKKGGERQFNGLVDVYRKTYRSDG 190
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 41.9 bits (94), Expect = 1e-04
Identities = 20/54 (37%), Positives = 35/54 (64%)
Frame = +1
Query: 265 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQG 426
L+GG++A VS+TAV+P+ER+K++ QVQ+ ++ Y + V+I +G
Sbjct: 25 LSGGVAATVSRTAVSPLERMKIIFQVQN-------NKEYTSLTSTLVKIWNREG 71
Score = 32.7 bits (71), Expect = 0.064
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +2
Query: 425 GLLSFWRGNFANVIRYFPTQALNFAFKDKYKQ 520
GL+ F+RGN N +R FP A+ FA + KQ
Sbjct: 71 GLIGFFRGNGTNCLRAFPYGAVQFATFNMLKQ 102
>SPAC17H9.08 |||mitochondrial coenzyme A
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 39.5 bits (88), Expect = 6e-04
Identities = 21/52 (40%), Positives = 31/52 (59%)
Frame = +1
Query: 256 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRI 411
K +AGG + V+K+ VAP++RVK+L Q H S + A R+ G+ A I
Sbjct: 19 KSGIAGGTAGCVAKSVVAPLDRVKILYQTNHASYRGYAYSRH-GLYKAIKHI 69
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 33.9 bits (74), Expect = 0.028
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +1
Query: 238 DPVAFAKDFLAGGISAAVSKTAVAPIERVKLLL 336
DP F++GGI+ VS+T AP++R+K++L
Sbjct: 123 DPKNNVGYFISGGIAGIVSRTCTAPLDRLKVML 155
Score = 27.1 bits (57), Expect = 3.2
Identities = 9/32 (28%), Positives = 22/32 (68%)
Frame = +1
Query: 262 FLAGGISAAVSKTAVAPIERVKLLLQVQHVSK 357
+LAGG++ +V++ + P++ +K +Q +S+
Sbjct: 232 YLAGGMAGSVAQMFIYPVDTLKFRIQCSDLSR 263
>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 33.1 bits (72), Expect = 0.048
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +1
Query: 262 FLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQG 426
FL+GG++A + T P E +K Q+Q ++K + + YK + AF I + +G
Sbjct: 27 FLSGGLAACGAVTLTNPFEVIKTRFQLQGQLTKLDPSKRIYKSVGQAFSLIARHEG 82
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 31.1 bits (67), Expect = 0.19
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +1
Query: 241 PVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKE 420
PV + +++G IS + V P+E V++ LQ+Q K + Y G D +I +
Sbjct: 109 PVTMPQYYVSGAISGLANSFLVGPVEHVRIRLQIQ-TGKNVL----YHGPWDCIKKISSQ 163
Query: 421 QG 426
G
Sbjct: 164 YG 165
Score = 29.9 bits (64), Expect = 0.45
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +1
Query: 247 AFAKDFLAGGISAAVSKTAVA-PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQ 423
+F KDFLA G+S V++ V P + VK+ LQ Q I Y +D +I K +
Sbjct: 16 SFTKDFLA-GVSGGVAQVLVGQPFDCVKVRLQSQSNVSPI-----YNNALDCVKKISKNE 69
Query: 424 G 426
G
Sbjct: 70 G 70
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 31.1 bits (67), Expect = 0.19
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = +1
Query: 265 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGSP 432
++GG+S A++ + P++ VK LLQ + S I ++ KG +D I G P
Sbjct: 209 ISGGLSGAIASSLTTPLDVVKTLLQTRG-SSSIPEVRKCKGSLDVVRFIYNYGGIP 263
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 30.3 bits (65), Expect = 0.34
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +1
Query: 199 VKIT*SNKMSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQ 339
V +T +N SN P + F+AGG++ + A AP++ VK LQ
Sbjct: 32 VLLTKANNASNERAPPPLSH-FIAGGVAGMLGAIATAPLDVVKTRLQ 77
Score = 25.4 bits (53), Expect = 9.7
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +1
Query: 646 RLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYXXFGVSVQGI 780
RL D G + S + +CI K + +G GLY S+ G+
Sbjct: 189 RLQLDKKSGQAAQYRSSI-DCIIKTIRLEGFRGLYKGLSASLLGV 232
>SPAC890.03 |ppk16|mug92|serine/threonine protein kinase Ppk16
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 672
Score = 29.5 bits (63), Expect = 0.59
Identities = 24/67 (35%), Positives = 32/67 (47%)
Frame = -1
Query: 743 PIRPSDLKILLMQFPRPENSRXPSPLPTSAARRYVRSRGGTRSTERWLRRHHRRPDYQRS 564
P + S+L I + P P + SP PT +R +RS G RS+ R R Y S
Sbjct: 514 PSKSSNLSINIDIPPSPLQNTVISPQPTRRSRTPIRSLSG-RSSVASSRNSSRTRSY--S 570
Query: 563 NARTASS 543
N +ASS
Sbjct: 571 NVSSASS 577
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 29.1 bits (62), Expect = 0.79
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +1
Query: 265 LAGGISAAVSKTAVAPIERVKLLLQVQHVS 354
LAGGIS+ + + +AP + +K+ +Q+ S
Sbjct: 21 LAGGISSVICRFMIAPFDVIKIRMQITQSS 50
>SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 604
Score = 27.9 bits (59), Expect = 1.8
Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 10/68 (14%)
Frame = -1
Query: 701 PRPE-NSRXPSP---LPTSAARRYVRSRGGTRSTERWLRRH------HRRPDYQRSNART 552
PR + SR PSP + + +R VRSR RS+ RH HR DY RS +
Sbjct: 122 PRSDYGSRSPSPHSSVDSHQSRSPVRSRDRDRSSRSSRSRHPSSRSRHRYDDYSRSPPYS 181
Query: 551 ASSCQHRR 528
+ + RR
Sbjct: 182 SRHSRSRR 189
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 27.9 bits (59), Expect = 1.8
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 256 KDFLAGGISAAVSKTAVAPIERVKLLLQVQ 345
KD +AGG + S VAP++ VK Q Q
Sbjct: 7 KDAIAGGAAGLASSLVVAPLDVVKTRKQAQ 36
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 27.5 bits (58), Expect = 2.4
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +1
Query: 253 AKDFLAGGISAAVSKTAVAPIERVKLLLQ-VQHVSKQIAADQRYKGIVDAFVRIPKEQ 423
A L G + V P E +K+ LQ V++ SK Y G VD F +I K++
Sbjct: 105 ALSILTGSCAGFTETFVVVPFELMKIRLQDVKNASK-------YNGTVDCFTKIVKQE 155
>SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 338
Score = 27.1 bits (57), Expect = 3.2
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = +1
Query: 694 GLGNCISKIFKSDGLIGLYXXFG 762
G+ + + ++KS+GL+GL+ FG
Sbjct: 283 GIRHVLGGLYKSEGLLGLFRGFG 305
>SPAC19G12.02c |pms1||MutL family mismatch-repair protein
Pms1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 794
Score = 25.8 bits (54), Expect = 7.3
Identities = 13/56 (23%), Positives = 26/56 (46%)
Frame = -3
Query: 792 PVDDDTLHGHPETXVQTDQTVGLEDLADAVSETGEFTLXISLTDIGGETVRAKSRG 625
P+D +T+H V TD +++L + ++G T+ I + G ++ G
Sbjct: 6 PIDANTVHKICSGQVITDVASAVKELVENSLDSGATTIEIRFKNYGINSIEVVDNG 61
>SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1072
Score = 25.8 bits (54), Expect = 7.3
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -1
Query: 404 TKASTIPL*RWSAAICLLTCCTWSSSLTRSMGATAV 297
T+ + + + WSA I +LT C SLT S+ T +
Sbjct: 533 TEENVVYVGLWSADIIMLTYCQDGISLTHSLKLTDI 568
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,043,472
Number of Sequences: 5004
Number of extensions: 59297
Number of successful extensions: 190
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 165
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 188
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 396433620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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