Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_FL5_I02
(752 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 31 1.2
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 31 1.2
U00046-6|AAN65305.1| 422|Caenorhabditis elegans Mammalian zak k... 31 1.2
U00046-5|AAC47047.4| 516|Caenorhabditis elegans Mammalian zak k... 31 1.2
AF043704-2|AAX88816.1| 407|Caenorhabditis elegans Prion-like-(q... 30 2.0
Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical pr... 29 2.7
AL132862-11|CAB60541.1| 396|Caenorhabditis elegans Hypothetical... 29 2.7
AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein. 29 2.7
L23648-5|AAN63385.1| 381|Caenorhabditis elegans Cyclin t protei... 28 6.2
L23648-4|AAA28033.2| 555|Caenorhabditis elegans Cyclin t protei... 28 6.2
U97196-12|AAB52456.2| 564|Caenorhabditis elegans Hypothetical p... 28 8.2
AF125969-1|AAD14762.2| 1484|Caenorhabditis elegans Hypothetical ... 28 8.2
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +2
Query: 536 PSPGDLGYINPIIKSP-IPYTNHPQT*HPFPSIP*TPY*KEFAPGLKPPLSSXAPS 700
P+P + + +P SP P ++P +P PS P Y E A + PP PS
Sbjct: 355 PAPQEPAHPSPSYPSPSYPSPSYPSPSYPSPSYPSPSYPAEPAYSVPPPAKPEQPS 410
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 5/66 (7%)
Frame = +2
Query: 533 PPSPGDLGYINPIIKS-----PIPYTNHPQT*HPFPSIP*TPY*KEFAPGLKPPLSSXAP 697
PP P Y+ + P P +PQ P P+ P PY + P PPL+S
Sbjct: 30 PPPPKPAPYVEQSAQPQQTAPPPPPAPYPQQAVPAPAPPPAPYPQHAVPAPAPPLASYPQ 89
Query: 698 SAYLTP 715
+A P
Sbjct: 90 NAVPVP 95
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +2
Query: 527 IKPPSPGDLGYINPIIKSPIP-YTNHPQT*HPFPSIP*TPY*KEFAPGLKPP 679
+ P+P Y + +P P ++PQ P P+ P PY + P PP
Sbjct: 62 VPAPAPPPAPYPQHAVPAPAPPLASYPQNAVPVPAPPPAPYPQHAVPAPAPP 113
>U00046-6|AAN65305.1| 422|Caenorhabditis elegans Mammalian zak
kinase homolog protein1, isoform b protein.
Length = 422
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 222 GTVSSTFDHPFSTPVLRSYWHRNQ 293
G +++ F H S+P LR +WHR Q
Sbjct: 306 GHLNNGFHHTTSSPQLRGFWHRKQ 329
>U00046-5|AAC47047.4| 516|Caenorhabditis elegans Mammalian zak
kinase homolog protein1, isoform a protein.
Length = 516
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 222 GTVSSTFDHPFSTPVLRSYWHRNQ 293
G +++ F H S+P LR +WHR Q
Sbjct: 400 GHLNNGFHHTTSSPQLRGFWHRKQ 423
>AF043704-2|AAX88816.1| 407|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 72
protein.
Length = 407
Score = 29.9 bits (64), Expect = 2.0
Identities = 28/95 (29%), Positives = 40/95 (42%), Gaps = 9/95 (9%)
Frame = +1
Query: 394 SAPSLKIPVTVDLCWTTADVTVEGVNVLATPSSSRITIGGLALMHQATLP-------WRS 552
S S I T D+ T A T EG+ I L + +++ P R
Sbjct: 96 STTSEPITTTEDVTLTVAGTTTEGLQADNLKKVDDIEAAILQAVIESSSPEPPRSSTHRQ 155
Query: 553 RLHQ--PDHQIPDSIHQPPPDLTSISINPLNAVLK 651
R+H+ P H+I S PPP + +I L AVL+
Sbjct: 156 RIHRIRPGHRIRPSPPAPPPRVDAIEEAVLRAVLE 190
>Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical protein
K04G2.8b protein.
Length = 1188
Score = 29.5 bits (63), Expect = 2.7
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +3
Query: 225 TVSSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHH---KRLP--RRVSCQS*GCRF 389
T S + HP ++P+ +S HR Q + A +RLL +P R +S + G +
Sbjct: 807 TSSPAWSHPDTSPIPKSSSHRTQPNRRQDASDADRLLMESIMSEMPKSRIISPRLAGTQQ 866
Query: 390 SFRP*PQNTSHS 425
P P+ SHS
Sbjct: 867 YLEPEPERRSHS 878
>Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical protein
K04G2.8a protein.
Length = 1186
Score = 29.5 bits (63), Expect = 2.7
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +3
Query: 225 TVSSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHH---KRLP--RRVSCQS*GCRF 389
T S + HP ++P+ +S HR Q + A +RLL +P R +S + G +
Sbjct: 805 TSSPAWSHPDTSPIPKSSSHRTQPNRRQDASDADRLLMESIMSEMPKSRIISPRLAGTQQ 864
Query: 390 SFRP*PQNTSHS 425
P P+ SHS
Sbjct: 865 YLEPEPERRSHS 876
>AL132862-11|CAB60541.1| 396|Caenorhabditis elegans Hypothetical
protein Y73F8A.16 protein.
Length = 396
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRD 357
F L F++TG E KS V + S+ +I GYR+
Sbjct: 37 FPELNFNITGLEEKSRYVVLLSIEKYDNIRYGYRN 71
>AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein.
Length = 1186
Score = 29.5 bits (63), Expect = 2.7
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +3
Query: 225 TVSSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHH---KRLP--RRVSCQS*GCRF 389
T S + HP ++P+ +S HR Q + A +RLL +P R +S + G +
Sbjct: 805 TSSPAWSHPDTSPIPKSSSHRTQPNRRQDASDADRLLMESIMSEMPKSRIISPRLAGTQQ 864
Query: 390 SFRP*PQNTSHS 425
P P+ SHS
Sbjct: 865 YLEPEPERRSHS 876
>L23648-5|AAN63385.1| 381|Caenorhabditis elegans Cyclin t protein
1.2, isoform b protein.
Length = 381
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +3
Query: 516 RPYASSHPPLAISATSTRSSNPRFHTPTTPRLNIHFHQ 629
RP +SSHP S +S+ S+N ++ L+ H HQ
Sbjct: 195 RPSSSSHPLHHHSTSSSASNNSNHQNRSSSGLSAHQHQ 232
>L23648-4|AAA28033.2| 555|Caenorhabditis elegans Cyclin t protein
1.2, isoform a protein.
Length = 555
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +3
Query: 516 RPYASSHPPLAISATSTRSSNPRFHTPTTPRLNIHFHQ 629
RP +SSHP S +S+ S+N ++ L+ H HQ
Sbjct: 369 RPSSSSHPLHHHSTSSSASNNSNHQNRSSSGLSAHQHQ 406
>U97196-12|AAB52456.2| 564|Caenorhabditis elegans Hypothetical
protein B0207.1 protein.
Length = 564
Score = 27.9 bits (59), Expect = 8.2
Identities = 19/55 (34%), Positives = 24/55 (43%)
Frame = +2
Query: 533 PPSPGDLGYINPIIKSPIPYTNHPQT*HPFPSIP*TPY*KEFAPGLKPPLSSXAP 697
PP P G +NP+ + IP P P P +P P + AP L P S P
Sbjct: 97 PPLPRPPGNLNPVQQPQIPVQRTPPQCPP-PPVPHPPQITQMAPIL--PTSPAPP 148
>AF125969-1|AAD14762.2| 1484|Caenorhabditis elegans Hypothetical
protein Y38C9A.1 protein.
Length = 1484
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/47 (27%), Positives = 21/47 (44%)
Frame = +2
Query: 566 PIIKSPIPYTNHPQT*HPFPSIP*TPY*KEFAPGLKPPLSSXAPSAY 706
P +++P P ++ P T P P P P + P + AP+ Y
Sbjct: 1064 PTVQAPAPSSSIPNTSTSIPKAPSAPVLSAAPPKIVAPAAPAAPTHY 1110
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.132 0.399
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,358,927
Number of Sequences: 27780
Number of extensions: 336580
Number of successful extensions: 1088
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1087
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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