Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP09_FL5_I01
         (776 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          22   5.5  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          22   5.5  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          22   5.5  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          22   5.5  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          22   5.5  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          22   5.5  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    22   5.5  
DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein ...    22   7.3  
AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein ...    22   7.3  
AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding prote...    22   7.3  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    22   7.3  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    21   9.7  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   9.7  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   9.7  
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                21   9.7  

>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 87  RTESCRSRTKRNRHD 43
           RT SC SR + +RH+
Sbjct: 226 RTSSCHSRYEDSRHE 240


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 87  RTESCRSRTKRNRHD 43
           RT SC SR + +RH+
Sbjct: 226 RTSSCHSRYEDSRHE 240


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 87  RTESCRSRTKRNRHD 43
           RT SC SR + +RH+
Sbjct: 226 RTSSCHSRYEDSRHE 240


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 87  RTESCRSRTKRNRHD 43
           RT SC SR + +RH+
Sbjct: 226 RTSSCHSRYEDSRHE 240


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 87  RTESCRSRTKRNRHD 43
           RT SC SR + +RH+
Sbjct: 226 RTSSCHSRYEDSRHE 240


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 87  RTESCRSRTKRNRHD 43
           RT SC SR + +RH+
Sbjct: 226 RTSSCHSRYEDSRHE 240


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 87  RTESCRSRTKRNRHD 43
           RT SC SR + +RH+
Sbjct: 226 RTSSCHSRYEDSRHE 240


>DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein 1
           protein.
          Length = 116

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +3

Query: 468 VGDRFARSSLKNHYFHCFI 524
           + +  A   L+N Y+ CFI
Sbjct: 32  IDEILANDRLRNQYYDCFI 50


>AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein
           protein.
          Length = 116

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +3

Query: 468 VGDRFARSSLKNHYFHCFI 524
           + +  A   L+N Y+ CFI
Sbjct: 32  IDEILANDRLRNQYYDCFI 50


>AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding protein
           ASP5 protein.
          Length = 143

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 10/38 (26%), Positives = 17/38 (44%)
 Frame = -1

Query: 512 KVVVFQXRSRETISHLCYTSHVSLQCQTRVKLNRVFFP 399
           K +V   R+ E     C  ++  +QC  +    + FFP
Sbjct: 106 KEIVAVCRNEEYTGDDCQKTYQYVQCHYKQNPEKFFFP 143


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 12/39 (30%), Positives = 15/39 (38%)
 Frame = -1

Query: 119 CQF*ADR*TAVVQNRADRARNETDTTLRLGRSAEGRSHQ 3
           C F  D        +  R  N+     RLGR   G+S Q
Sbjct: 3   CPFSRDLSKPGCDEQTSRGDNDRSRIARLGRDDGGKSRQ 41


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = +3

Query: 660 RTLPXGEFDWGGTSV 704
           R  P G F WGG  V
Sbjct: 554 RFQPWGPFTWGGIGV 568


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -1

Query: 590 ERNTVRPPILLDRAPXPPNRVSNET 516
           E +T+R PI+   +  PPN    ET
Sbjct: 179 EFDTIRIPIVRSLSKSPPNDEGIET 203


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -2

Query: 463 ATPLMSPYNARLESSSTGSSFP 398
           A  + SP   +   SSTGSS P
Sbjct: 347 AKQMASPEPPKSSESSTGSSIP 368


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = -2

Query: 493 DDRAKRSPTYATPLMSPYNARLESSSTGSSFPADSP 386
           D R   SP   TP+ + Y   +E+ +  S F  D+P
Sbjct: 22  DKRIYLSPR--TPIKNVYKNNIETKNQLSPFNIDTP 55


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,806
Number of Sequences: 438
Number of extensions: 4554
Number of successful extensions: 17
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24396777
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)