Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP09_FL5_H12
         (820 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.    24   1.5  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    24   1.9  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   2.6  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   2.6  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    23   3.4  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    23   4.5  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          23   4.5  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    23   4.5  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   4.5  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    22   7.8  

>U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.
          Length = 53

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +2

Query: 356 IPLPTRRVNNPAPAVRPITMYDQPIPWAPKVKY 454
           +PLP    N P P  RP   +    P+ PK+K+
Sbjct: 21  VPLP----NVPQPGRRPFPTFPGQGPFNPKIKW 49


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 11/31 (35%), Positives = 13/31 (41%)
 Frame = +3

Query: 102  RPLPXYYSVCISTIYPGLRRPIWRSSPMTPP 194
            RPL  +    I + Y  L R  WR     PP
Sbjct: 1328 RPLSEHIYSSIDSDYSTLERTAWRQQQPPPP 1358


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 11/46 (23%), Positives = 21/46 (45%)
 Frame = +2

Query: 218 ALLHRRLQTAATTMGQWFRKRRIDINPTKSTAVLFKRGRPPNTTLS 355
           A LH  +         W +  +I++NP+ +  V  KR   P+  ++
Sbjct: 825 ATLHCEVHGDTPVTVTWLKGGKIELNPSTNYRVTVKREVTPDGVIA 870


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 11/46 (23%), Positives = 21/46 (45%)
 Frame = +2

Query: 218 ALLHRRLQTAATTMGQWFRKRRIDINPTKSTAVLFKRGRPPNTTLS 355
           A LH  +         W +  +I++NP+ +  V  KR   P+  ++
Sbjct: 821 ATLHCEVHGDTPVTVTWLKGGKIELNPSTNYRVTVKREVTPDGVIA 866


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +1

Query: 13  DYLSNRSFRYRVEGTRSRPRHVTAGVPQGSALSPXTIQ 126
           D+L+N +          +P+HV  G PQ   L+  T Q
Sbjct: 87  DWLANANSPVGSPSAALQPQHVVYGNPQQQQLAAETQQ 124


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 132 ISTIYPGLRRPIWR 173
           + T+YPG+R P +R
Sbjct: 108 LGTLYPGMRAPSFR 121


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 62  PGPVTSQPESRKAPPSPRLL 121
           PG V   PE++  PPS  L+
Sbjct: 287 PGEVDLPPETQPTPPSATLV 306


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 132 ISTIYPGLRRPIWR 173
           + T+YPG+R P +R
Sbjct: 108 LGTLYPGMRAPSFR 121


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 10/22 (45%), Positives = 10/22 (45%)
 Frame = +3

Query: 384  TPPPPFAQSRCTTSPYRGPRRS 449
            TP P  AQ       YRGP  S
Sbjct: 1339 TPVPRLAQDSSEDESYRGPSAS 1360


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 13/48 (27%), Positives = 20/48 (41%)
 Frame = +2

Query: 8   YETTCRTVRSDIGSRERVPGPVTSQPESRKAPPSPRLLFSLYINDIPR 151
           Y   C+ +  +I + E++P PV         PP P   +      IPR
Sbjct: 347 YNNNCKKLYYNIINIEQIPVPVPVPIYCGNFPPRPMGPWISIQEQIPR 394


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 245,845
Number of Sequences: 438
Number of extensions: 6596
Number of successful extensions: 20
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26096055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)