Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_FL5_H05
(809 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetit... 33 0.92
AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetit... 33 0.92
AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetit... 33 0.92
AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear... 33 0.92
AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear... 33 0.92
AK128140-1|BAC87294.1| 280|Homo sapiens protein ( Homo sapiens ... 32 2.8
AK125824-1|BAC86307.1| 280|Homo sapiens protein ( Homo sapiens ... 32 2.8
BC150265-1|AAI50266.1| 1481|Homo sapiens CRKRS protein protein. 31 3.7
BC130390-1|AAI30391.1| 755|Homo sapiens FAM22F protein protein. 31 3.7
AL691447-4|CAI13277.1| 655|Homo sapiens family with sequence si... 31 3.7
AL158827-6|CAH72568.1| 622|Homo sapiens family with sequence si... 31 3.7
AL133071-1|CAB61394.1| 613|Homo sapiens hypothetical protein pr... 31 3.7
AF227198-1|AAF36401.1| 1490|Homo sapiens CrkRS protein. 31 3.7
AB020711-1|BAA74927.2| 1535|Homo sapiens KIAA0904 protein protein. 31 3.7
AL133561-1|CAB63715.1| 580|Homo sapiens hypothetical protein pr... 31 4.9
AF174114-1|AAD53860.1| 133|Homo sapiens immunoglobulin heavy ch... 31 4.9
BC009743-1|AAH09743.1| 531|Homo sapiens coiled-coil domain cont... 30 8.6
BC002787-1|AAH02787.1| 531|Homo sapiens coiled-coil domain cont... 30 8.6
>BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 33.5 bits (73), Expect = 0.92
Identities = 29/79 (36%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Frame = +1
Query: 313 PRKAQR-CSSKGVALRTPR*ASPSRLGASITPPPPFAQSRCSTSP--YRGPRRSNI*ASP 483
PRK Q+ S +G R+P P+R S +P PP + R T P R P SP
Sbjct: 533 PRKRQKETSPRGRRRRSPS-PPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSP 591
Query: 484 STVG*HSAPTSRRYATVPP 540
S +S P RRY+ PP
Sbjct: 592 SPRR-YSPPIQRRYSPSPP 609
>AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 33.5 bits (73), Expect = 0.92
Identities = 29/79 (36%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Frame = +1
Query: 313 PRKAQR-CSSKGVALRTPR*ASPSRLGASITPPPPFAQSRCSTSP--YRGPRRSNI*ASP 483
PRK Q+ S +G R+P P+R S +P PP + R T P R P SP
Sbjct: 533 PRKRQKETSPRGRRRRSPS-PPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSP 591
Query: 484 STVG*HSAPTSRRYATVPP 540
S +S P RRY+ PP
Sbjct: 592 SPRR-YSPPIQRRYSPSPP 609
>AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 33.5 bits (73), Expect = 0.92
Identities = 29/79 (36%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Frame = +1
Query: 313 PRKAQR-CSSKGVALRTPR*ASPSRLGASITPPPPFAQSRCSTSP--YRGPRRSNI*ASP 483
PRK Q+ S +G R+P P+R S +P PP + R T P R P SP
Sbjct: 533 PRKRQKETSPRGRRRRSPS-PPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSP 591
Query: 484 STVG*HSAPTSRRYATVPP 540
S +S P RRY+ PP
Sbjct: 592 SPRR-YSPPIQRRYSPSPP 609
>AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 33.5 bits (73), Expect = 0.92
Identities = 29/79 (36%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Frame = +1
Query: 313 PRKAQR-CSSKGVALRTPR*ASPSRLGASITPPPPFAQSRCSTSP--YRGPRRSNI*ASP 483
PRK Q+ S +G R+P P+R S +P PP + R T P R P SP
Sbjct: 531 PRKRQKETSPRGRRRRSPS-PPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSP 589
Query: 484 STVG*HSAPTSRRYATVPP 540
S +S P RRY+ PP
Sbjct: 590 SPRR-YSPPIQRRYSPSPP 607
>AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 33.5 bits (73), Expect = 0.92
Identities = 29/79 (36%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Frame = +1
Query: 313 PRKAQR-CSSKGVALRTPR*ASPSRLGASITPPPPFAQSRCSTSP--YRGPRRSNI*ASP 483
PRK Q+ S +G R+P P+R S +P PP + R T P R P SP
Sbjct: 531 PRKRQKETSPRGRRRRSPS-PPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSP 589
Query: 484 STVG*HSAPTSRRYATVPP 540
S +S P RRY+ PP
Sbjct: 590 SPRR-YSPPIQRRYSPSPP 607
>AK128140-1|BAC87294.1| 280|Homo sapiens protein ( Homo sapiens
cDNA FLJ46261 fis, clone TESTI4025062. ).
Length = 280
Score = 31.9 bits (69), Expect = 2.8
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +3
Query: 579 SKMSLRNKVT-LYKTCIRPGHDLCKCSVRSRGPHTLKILSN 698
S M L ++ + ++ +C+ GH L CSVR GP T LSN
Sbjct: 147 SSMCLPSRTSSIFYSCLPLGHHLPFCSVRPLGPPTTSPLSN 187
>AK125824-1|BAC86307.1| 280|Homo sapiens protein ( Homo sapiens
cDNA FLJ43836 fis, clone TESTI4005857. ).
Length = 280
Score = 31.9 bits (69), Expect = 2.8
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +3
Query: 579 SKMSLRNKVT-LYKTCIRPGHDLCKCSVRSRGPHTLKILSN 698
S M L ++ + ++ +C+ GH L CSVR GP T LSN
Sbjct: 147 SSMCLPSRTSSIFYSCLPLGHHLPFCSVRPLGPPTTSPLSN 187
>BC150265-1|AAI50266.1| 1481|Homo sapiens CRKRS protein protein.
Length = 1481
Score = 31.5 bits (68), Expect = 3.7
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +1
Query: 358 TPR*ASPSRLGASITPPPPFAQSRCSTSPYRGPRRSNI*ASPSTVG*HSAPTSRRYATVP 537
+P PS +S P P+++ + S SPY R S+ S S G +P RR ++ P
Sbjct: 276 SPPYKEPSAYQSSTRSPSPYSRRQRSVSPYSRRRSSSYERSGSYSGRSPSPYGRRRSSSP 335
>BC130390-1|AAI30391.1| 755|Homo sapiens FAM22F protein protein.
Length = 755
Score = 31.5 bits (68), Expect = 3.7
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Frame = +3
Query: 288 RKWRIDINPTKSTAVLFKRGRPPNTTLSIPLPTRRVNNPAPAV---RPITMFDQPIPWAP 458
R WR+ +P S+ +L GR P L P +R +P+P + +F P P A
Sbjct: 650 RPWRLSQSPVPSSGLLSPGGRGPQGALQSPSAQKRGLSPSPPASKSKKRPLFGSPSP-AE 708
Query: 459 KVKYLG 476
K + G
Sbjct: 709 KTPHPG 714
>AL691447-4|CAI13277.1| 655|Homo sapiens family with sequence
similarity 22, member F protein.
Length = 655
Score = 31.5 bits (68), Expect = 3.7
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +3
Query: 288 RKWRIDINPTKSTAVLFKRGRPPNTTLSIPLPTRRVNNPAPA 413
R WR+ +P S+ +L GR P L P +R +P+P+
Sbjct: 549 RPWRLSQSPVPSSGLLSPGGRGPQGALQSPSAQKRGLSPSPS 590
>AL158827-6|CAH72568.1| 622|Homo sapiens family with sequence
similarity 22, member G protein.
Length = 622
Score = 31.5 bits (68), Expect = 3.7
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +3
Query: 288 RKWRIDINPTKSTAVLFKRGRPPNTTLSIPLPTRRVNNPAPA 413
R WR+ +P S+ +L GR P L P +R +P+P+
Sbjct: 516 RPWRLSQSPVPSSGLLSPGGRGPQGALQSPSAQKRGLSPSPS 557
>AL133071-1|CAB61394.1| 613|Homo sapiens hypothetical protein
protein.
Length = 613
Score = 31.5 bits (68), Expect = 3.7
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Frame = +3
Query: 288 RKWRIDINPTKSTAVLFKRGRPPNTTLSIPLPTRRVNNPAPAV---RPITMFDQPIPWAP 458
R WR+ +P S+ +L GR P L P +R +P+P + +F P P A
Sbjct: 508 RPWRLSQSPVPSSGLLSPGGRGPQGALQSPSAQKRGLSPSPPASKSKKRPLFGSPSP-AE 566
Query: 459 KVKYLG 476
K + G
Sbjct: 567 KTPHPG 572
>AF227198-1|AAF36401.1| 1490|Homo sapiens CrkRS protein.
Length = 1490
Score = 31.5 bits (68), Expect = 3.7
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +1
Query: 358 TPR*ASPSRLGASITPPPPFAQSRCSTSPYRGPRRSNI*ASPSTVG*HSAPTSRRYATVP 537
+P PS +S P P+++ + S SPY R S+ S S G +P RR ++ P
Sbjct: 276 SPPYKEPSAYQSSTRSPSPYSRRQRSVSPYSRRRSSSYERSGSYSGRSPSPYGRRRSSSP 335
>AB020711-1|BAA74927.2| 1535|Homo sapiens KIAA0904 protein protein.
Length = 1535
Score = 31.5 bits (68), Expect = 3.7
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +1
Query: 358 TPR*ASPSRLGASITPPPPFAQSRCSTSPYRGPRRSNI*ASPSTVG*HSAPTSRRYATVP 537
+P PS +S P P+++ + S SPY R S+ S S G +P RR ++ P
Sbjct: 330 SPPYKEPSAYQSSTRSPSPYSRRQRSVSPYSRRRSSSYERSGSYSGRSPSPYGRRRSSSP 389
>AL133561-1|CAB63715.1| 580|Homo sapiens hypothetical protein
protein.
Length = 580
Score = 31.1 bits (67), Expect = 4.9
Identities = 28/71 (39%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Frame = +1
Query: 313 PRKAQRCSSKGVALRTPR*ASPSRL--GASITPPPPFAQSRCS--TSPYRGPRRSNI*AS 480
PR++ R S + RTP ASP+R AS T PP R S SP R P R AS
Sbjct: 199 PRESPRMSHRASPTRTPPRASPTRRPPRASPTRTPPRESLRTSHRASPTRMPPR----AS 254
Query: 481 PSTVG*HSAPT 513
P+ ++PT
Sbjct: 255 PTRRPPRASPT 265
Score = 30.3 bits (65), Expect = 8.6
Identities = 33/104 (31%), Positives = 42/104 (40%), Gaps = 3/104 (2%)
Frame = +1
Query: 187 RSSPM-TPPSTTRVGRRRCFIDDFRPRLPPWDXXXXXXXXXXXPRKAQRCSSKGVALRTP 363
R+SP TPP + R PR P PR++ R S + R P
Sbjct: 191 RASPTRTPPRESPRMSHRASPTRTPPRASPTRRPPRASPTRTPPRESLRTSHRASPTRMP 250
Query: 364 R*ASPSRL--GASITPPPPFAQSRCSTSPYRGPRRSNI*ASPST 489
ASP+R AS T PP A +P R R+ ASP+T
Sbjct: 251 PRASPTRRPPRASPTGSPPRAS---PMTPPRASPRTPPRASPTT 291
>AF174114-1|AAD53860.1| 133|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 133
Score = 31.1 bits (67), Expect = 4.9
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +3
Query: 189 LFADDTAIYYSCRKKALLHRRLQTAATTM-GQWFRKW 296
L +DDTA+YY R + + H + T G WF W
Sbjct: 86 LRSDDTAVYYCARDQGIPHYDFWSGITPEDGDWFDPW 122
>BC009743-1|AAH09743.1| 531|Homo sapiens coiled-coil domain
containing 9 protein.
Length = 531
Score = 30.3 bits (65), Expect = 8.6
Identities = 21/61 (34%), Positives = 27/61 (44%)
Frame = +1
Query: 313 PRKAQRCSSKGVALRTPR*ASPSRLGASITPPPPFAQSRCSTSPYRGPRRSNI*ASPSTV 492
PRK + + VA+ + + PSR TP PP A T P +G R AS S
Sbjct: 55 PRKGRSVEKENVAVESEKNLGPSRRSPG-TPRPPGASKGGRTPPQQGGRAGMGRASRSWE 113
Query: 493 G 495
G
Sbjct: 114 G 114
>BC002787-1|AAH02787.1| 531|Homo sapiens coiled-coil domain
containing 9 protein.
Length = 531
Score = 30.3 bits (65), Expect = 8.6
Identities = 21/61 (34%), Positives = 27/61 (44%)
Frame = +1
Query: 313 PRKAQRCSSKGVALRTPR*ASPSRLGASITPPPPFAQSRCSTSPYRGPRRSNI*ASPSTV 492
PRK + + VA+ + + PSR TP PP A T P +G R AS S
Sbjct: 55 PRKGRSVEKENVAVESEKNLGPSRRSPG-TPRPPGASKGGRTPPQQGGRAGMGRASRSWE 113
Query: 493 G 495
G
Sbjct: 114 G 114
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,881,184
Number of Sequences: 237096
Number of extensions: 3035915
Number of successful extensions: 20818
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 19463
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20797
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10036353240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -