Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP09_FL5_G19
         (756 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   6.1  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   8.0  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    21   8.0  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   8.0  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +2

Query: 221 PPTQPPPSDNTANNRKICSKIP 286
           PP  PP  ++ A   +  SKIP
Sbjct: 732 PPPPPPRVESFAETVRTVSKIP 753


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
          kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +2

Query: 32 ALCLFIDSRNLQSCNYFGVPK 94
          AL L +  RNL++  + G+P+
Sbjct: 8  ALILTVGGRNLKNAEFNGLPE 28


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -1

Query: 375 YDISIRSACLLYAN 334
           YD S+ +AC LY++
Sbjct: 68  YDASVAAACKLYSS 81


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = +3

Query: 12  VVRSVVLHFVYL*TVAICSHVIILGFLK 95
           + R ++L FV      +CS ++ + F+K
Sbjct: 386 ITRGLILSFVDYFVFLLCSILVNIAFIK 413


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,018
Number of Sequences: 336
Number of extensions: 1869
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20234955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)