Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP09_FL5_G09
         (832 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0822 + 28352941-28353825,28353863-28354016,28354714-283547...    31   0.85 
09_04_0379 - 17094540-17094868,17095354-17095717                       29   6.0  
10_08_0106 + 14842748-14843085,14843122-14843250,14844145-148442...    28   7.9  
06_03_1501 + 30612643-30613310,30613396-30613501,30613732-306139...    28   7.9  
05_03_0247 + 10925329-10925566,10925744-10926357,10926723-109272...    28   7.9  

>04_04_0822 +
           28352941-28353825,28353863-28354016,28354714-28354754,
           28355060-28355310,28355411-28355591,28356138-28356323,
           28356396-28356569,28356992-28357150,28357424-28357501,
           28357612-28357748,28357980-28358044,28358115-28358148,
           28358216-28358372,28359135-28359196,28360041-28360118,
           28360940-28361042
          Length = 914

 Score = 31.5 bits (68), Expect = 0.85
 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = -1

Query: 229 AGRRVRQAARPRLQHGPP-RLEPPRSNYKPS*XPA 128
           AG+  R   RP+ QH PP R  PPR +++ +  PA
Sbjct: 83  AGKSTRVLNRPQRQHSPPGRALPPRESFRYNPKPA 117


>09_04_0379 - 17094540-17094868,17095354-17095717
          Length = 230

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -2

Query: 318 NICVSRKVRHPRSRPTQSARTGRTASTVRMPADG 217
           N  + R++RH   +PT  AR G     +  PA G
Sbjct: 176 NRAIPRRIRHDLEKPTDGARAGGRKRGIGKPAFG 209


>10_08_0106 + 14842748-14843085,14843122-14843250,14844145-14844211,
            14847177-14847324,14847998-14848097,14848306-14848384,
            14848527-14848687,14848829-14848908,14849319-14849475,
            14849575-14849723,14849909-14850076,14850426-14850719,
            14851002-14851046,14851213-14851462,14851707-14851835,
            14852799-14853039,14853977-14854642
          Length = 1066

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 18/64 (28%), Positives = 26/64 (40%)
 Frame = -2

Query: 288  PRSRPTQSARTGRTASTVRMPADGSAKRRDHASSTDRRDWSLRARTTNLPKXLPVPQVDF 109
            P++R   S    R+A       D  ++R  H SS   +  S   R  +LP   P P    
Sbjct: 843  PKARSRSSQPADRSAPPPPASPDRHSRRSPHRSSGSGKKRSSSDRYDDLPLPPPPPPASR 902

Query: 108  HRAS 97
            H A+
Sbjct: 903  HEAA 906


>06_03_1501 +
           30612643-30613310,30613396-30613501,30613732-30613934,
           30614211-30614502
          Length = 422

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 16/49 (32%), Positives = 24/49 (48%)
 Frame = +2

Query: 233 RTVEAVRPVLADWVGRDRGCLTFRLTQMLTGHGCFGRYLFKIAGREPTA 379
           + VE +   LADWV  + G      T   TG  C+G  L  +  ++P+A
Sbjct: 190 KNVEMLSEHLADWVSEEDGKKIVFHTFSNTGWLCYGVILENLQRQDPSA 238


>05_03_0247 +
           10925329-10925566,10925744-10926357,10926723-10927238,
           10927376-10927504
          Length = 498

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
 Frame = +1

Query: 310 ADVDRPWVFWPVPLQDSRKGTDGAVPPLRG-PRRGRHSGTY 429
           AD   PW FW V L++    T  A+ P  G P R    G +
Sbjct: 138 ADGPSPWQFWMVMLKNGNLDTSAAICPDNGRPARPFPQGKF 178


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,730,897
Number of Sequences: 37544
Number of extensions: 373467
Number of successful extensions: 1482
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1288
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1455
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2291695380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)