Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_FL5_G08
(1076 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 35 0.13
03_01_0515 - 3864796-3865425 33 0.39
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 32 0.90
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 31 1.6
02_05_0686 - 30900748-30902167,30903442-30904742 31 1.6
12_02_1174 - 26696869-26698191 31 2.1
12_02_0118 - 13869237-13869307,13869375-13869465,13870321-138704... 30 3.6
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 30 3.6
09_04_0506 - 18188785-18190599 29 4.8
04_04_1105 - 30942735-30942791,30943116-30943466,30943670-309437... 29 4.8
05_04_0011 + 17139322-17139451,17139552-17140174 29 6.4
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18... 29 6.4
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 29 8.4
05_07_0200 - 28368890-28369021,28369169-28369303,28369918-283699... 29 8.4
04_04_1106 - 30948626-30948724,30948841-30949176,30949231-309493... 29 8.4
02_05_0742 + 31415862-31417088 29 8.4
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 34.7 bits (76), Expect = 0.13
Identities = 37/147 (25%), Positives = 40/147 (27%)
Frame = +1
Query: 514 PXQXXXGPXGXXAPPPXXPXGPXXSPXRXXXXHXCXXXXXXXPXPPXXXLPGXXXRXRXP 693
P G G PPP G P P PP L G + P
Sbjct: 1087 PLPPTLGDYGVAPPPPSIGAGAPPPPPPPGGI------TGVPPPPPIGGLGGH----QAP 1136
Query: 694 RVXPKXXGXPWXPXPRPPPXGXGXLPCRXXGXXXXGAGXRKAGSXXAXGPPPXXXXPPGG 873
P G P P PP G G P G G + PPP GG
Sbjct: 1137 PAPPLPEGIGGVPPP-PPVGGLGGPPAPPPPAGFRG-GTPPPNAHGGVAPPPPPPRGHGG 1194
Query: 874 XXXSAXRXXAXXPLXXXRLXXXPPPPP 954
A P + PPPPP
Sbjct: 1195 VGGPPTPPGAPAPPMPPGVPGGPPPPP 1221
>03_01_0515 - 3864796-3865425
Length = 209
Score = 33.1 bits (72), Expect = 0.39
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = +3
Query: 639 PPPSXXDXPRXXRAXAXPPXPXEKXXXXVGSXPPPPP 749
PPP P A PP P V S PPPPP
Sbjct: 84 PPPPLPPPPPPPAASPPPPPPSPPPPSPVKSSPPPPP 120
Score = 29.5 bits (63), Expect = 4.8
Identities = 14/44 (31%), Positives = 15/44 (34%)
Frame = +3
Query: 639 PPPSXXDXPRXXRAXAXPPXPXEKXXXXVGSXPPPPPXRXRXXP 770
PPPS P PP P S PPP P + P
Sbjct: 75 PPPSVTSSPPPPPLPPPPPPPAASPPPPPPSPPPPSPVKSSPPP 118
>10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 31.9 bits (69), Expect = 0.90
Identities = 38/144 (26%), Positives = 38/144 (26%), Gaps = 2/144 (1%)
Frame = +1
Query: 535 PXGXXAPPPXXPXGPXXSPXRXXXXHXCXXXXXXXPXPPXXXLPGXXXRXRXPRVXPKXX 714
P PPP P P P R P PP P R P
Sbjct: 628 PNHSVLPPPPPPPPPPSLPNRLVPPPPAPGIGNKFPAPPPPP-PPPRSSSRTPTGAATSS 686
Query: 715 GXPWXPXPRPPPXGXGXLPCRXXGXXXXGAGXRKAGSXXAXGPPPXXXXPPGGXXX--SA 888
P P P PPP LP R G PPP PP SA
Sbjct: 687 KGP--PPPPPPP-----LP----------PANRTNGPGVPSAPPPPPPPPPANRSNGPSA 729
Query: 889 XRXXAXXPLXXXRLXXXPPPPPSP 960
PL PP PP P
Sbjct: 730 PAPPLPPPLPAAANKRNPPAPPPP 753
Score = 31.1 bits (67), Expect = 1.6
Identities = 23/94 (24%), Positives = 27/94 (28%), Gaps = 2/94 (2%)
Frame = +1
Query: 685 RXPRVXPKXXGXPWXPXPRPPPXGXGXLPCRXXGXXXXGAGXRKAGSXXAXGPPPXXXXP 864
+ P P P P P PPP G + + PPP P
Sbjct: 533 KLPSPSPTAAAPPPPPPPPPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPPP 592
Query: 865 P--GGXXXSAXRXXAXXPLXXXRLXXXPPPPPSP 960
P S P+ R PPPPP P
Sbjct: 593 PLPNCLVPSPPPPPPPPPILPNRSVPPPPPPPPP 626
Score = 28.7 bits (61), Expect = 8.4
Identities = 15/40 (37%), Positives = 17/40 (42%), Gaps = 3/40 (7%)
Frame = +3
Query: 639 PPPSXXDXPRXXRAXAXPPXPXEKXXXX---VGSXPPPPP 749
PPP P+ A + PP P V S PPPPP
Sbjct: 568 PPPPPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPPPPPP 607
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 31.1 bits (67), Expect = 1.6
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = +3
Query: 633 GXPPPSXXDXPRXXRAXAXPPXPXEKXXXXVGSXPPPPP 749
G PPP P A A PP GS PPPPP
Sbjct: 319 GAPPPP----PAHPAAPAPPPPAPSPSAAGAGSGPPPPP 353
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 31.1 bits (67), Expect = 1.6
Identities = 20/78 (25%), Positives = 20/78 (25%)
Frame = +3
Query: 552 PPPXXXGGAPXLSXSGXXRXXXSXXAXGXPPPSXXDXPRXXRAXAXPPXPXEKXXXXVGS 731
PPP AP PPP P P P G
Sbjct: 317 PPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGG 376
Query: 732 XPPPPPXRXRXXPLQAGG 785
PPPPP P A G
Sbjct: 377 PPPPPPKGGASRPPAAPG 394
>12_02_1174 - 26696869-26698191
Length = 440
Score = 30.7 bits (66), Expect = 2.1
Identities = 21/72 (29%), Positives = 22/72 (30%)
Frame = +1
Query: 535 PXGXXAPPPXXPXGPXXSPXRXXXXHXCXXXXXXXPXPPXXXLPGXXXRXRXPRVXPKXX 714
P PPP P P P P PP P + P V PK
Sbjct: 154 PPPPPPPPPPPPRPPSVKPP-VVQPKPQPPPSLQPPSPPPPP-PTRPPSVKPPVVQPKPQ 211
Query: 715 GXPWXPXPRPPP 750
P P P PPP
Sbjct: 212 PPPTLPPPSPPP 223
Score = 30.3 bits (65), Expect = 2.8
Identities = 21/66 (31%), Positives = 22/66 (33%), Gaps = 1/66 (1%)
Frame = +1
Query: 553 PPPXXPXGPXXSPXRXXXXHXCXXXXXXXPXPPXXXLPGXXXRXRXPRV-XPKXXGXPWX 729
PPP P P P R P PP P + PRV PK P
Sbjct: 217 PPPSPPPPPPTVPPRTPGDTPAVVEPKPQPPPPPPRAP-----VKMPRVLEPKPSPPPPS 271
Query: 730 PXPRPP 747
P P PP
Sbjct: 272 PLPPPP 277
Score = 29.1 bits (62), Expect = 6.4
Identities = 26/107 (24%), Positives = 27/107 (25%)
Frame = +1
Query: 640 PXPPXXXLPGXXXRXRXPRVXPKXXGXPWXPXPRPPPXGXGXLPCRXXGXXXXGAGXRKA 819
P PP P R P P P P PPP P R K
Sbjct: 121 PVPPPPPPPRTRTRVEPPHRPPPVKPQPPPSLPPPPPPPPPPPPPRPPSVKPP-VVQPKP 179
Query: 820 GSXXAXGPPPXXXXPPGGXXXSAXRXXAXXPLXXXRLXXXPPPPPSP 960
+ PP PP P L PPPP P
Sbjct: 180 QPPPSLQPPSPPPPPPTRPPSVKPPVVQPKPQPPPTLPPPSPPPPPP 226
Score = 28.7 bits (61), Expect = 8.4
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = +3
Query: 639 PPPSXXDXPRXXRAXAXPPXPXEKXXXXVGSXPPPPPXR 755
PPP P + P P S PPPPP R
Sbjct: 159 PPPPPPPRPPSVKPPVVQPKPQPPPSLQPPSPPPPPPTR 197
>12_02_0118 -
13869237-13869307,13869375-13869465,13870321-13870440,
13870668-13870795,13871159-13871270,13871719-13871817,
13871918-13871992,13872099-13872320,13873177-13874034
Length = 591
Score = 29.9 bits (64), Expect = 3.6
Identities = 20/69 (28%), Positives = 22/69 (31%), Gaps = 3/69 (4%)
Frame = +3
Query: 579 PXLSXSGXXRXXXSXXAXGXPPPSXXDXPRXXRAXAXPPXPXEKXXXXVGSXPPP---PP 749
P G S A PPP P + PP P + V PPP PP
Sbjct: 42 PFAPPGGNGPVPSSIRAPQAPPPGARPFPGSPPPPSQPPPPFARPAAPVQQQPPPFGGPP 101
Query: 750 XRXRXXPLQ 776
PLQ
Sbjct: 102 GVMPSQPLQ 110
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 29.9 bits (64), Expect = 3.6
Identities = 19/65 (29%), Positives = 21/65 (32%)
Frame = +3
Query: 552 PPPXXXGGAPXLSXSGXXRXXXSXXAXGXPPPSXXDXPRXXRAXAXPPXPXEKXXXXVGS 731
PPP P LS S G PPP P + PP P +G
Sbjct: 1164 PPPATPPPPPPLSPSLPPPPPPPPLPSG-PPPQPAPPPLPIQPPPIPPPPVPSSPSSLGY 1222
Query: 732 XPPPP 746
PP P
Sbjct: 1223 QPPAP 1227
>09_04_0506 - 18188785-18190599
Length = 604
Score = 29.5 bits (63), Expect = 4.8
Identities = 18/57 (31%), Positives = 20/57 (35%), Gaps = 1/57 (1%)
Frame = -1
Query: 866 GGXXXXGGGPXAXXXPALRKPAPXXLXPXXLQGXXPXPXG-GGRGXGXHGXPXFFGW 699
GG GGP A P L +P P + P G G G G P GW
Sbjct: 398 GGFGGFPGGPGAAPFPGLMQPFPPVVAPHVNPAFFGRGGGMGAGGVGMWPDPSMGGW 454
>04_04_1105 -
30942735-30942791,30943116-30943466,30943670-30943762,
30943869-30944072,30944155-30944399,30945019-30945877,
30946070-30946936,30947113-30947562
Length = 1041
Score = 29.5 bits (63), Expect = 4.8
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +3
Query: 735 PPPPPXRXRXXPLQAGGREXXGGRLX*G 818
P PPP R R PL G + G RL G
Sbjct: 60 PAPPPPRRRALPLPRGAADARGARLPCG 87
>05_04_0011 + 17139322-17139451,17139552-17140174
Length = 250
Score = 29.1 bits (62), Expect = 6.4
Identities = 23/92 (25%), Positives = 24/92 (26%), Gaps = 2/92 (2%)
Frame = +1
Query: 730 PXPRPPPXGXGXLPCRXXGXXXXGAGXRKAGSXXAXGPPPXXXXPPGGXXX--SAXRXXA 903
P P PPP G G + PPP PP G R
Sbjct: 68 PPPPPPPSPPNGGNVIGNGKRLTPTGPDPIHNEFQPPPPPPPPSPPNGGKVIGDGKRLTP 127
Query: 904 XXPLXXXRLXXXPPPPPSPGXXXCXXXARXTP 999
P PPP P G R TP
Sbjct: 128 TGPDPVHNKFQPPPPSPPNGGNVIGDGKRLTP 159
>05_01_0028 +
182528-183852,183967-184127,184872-185116,185330-186073
Length = 824
Score = 29.1 bits (62), Expect = 6.4
Identities = 24/104 (23%), Positives = 27/104 (25%)
Frame = +3
Query: 639 PPPSXXDXPRXXRAXAXPPXPXEKXXXXVGSXPPPPPXRXRXXPLQAGGREXXGGRLX*G 818
PPP P PP P + PPPPP P
Sbjct: 57 PPPPPLPTPTVTTPTPPPPPPAPRPPRRHHRIPPPPPPLLPTPPPPPASISPTPAPPLPP 116
Query: 819 XXXPXXGPSPXXXXPTWXXXPLSASXARXXXXXEXXPXXXXPPP 950
P P+P P+ P S A P PPP
Sbjct: 117 PPAPAPPPTPTPKFPSSSANP-SPPDAYPFTNYPFFPNFAAPPP 159
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 28.7 bits (61), Expect = 8.4
Identities = 18/68 (26%), Positives = 19/68 (27%)
Frame = +3
Query: 546 GXPPPXXXGGAPXLSXSGXXRXXXSXXAXGXPPPSXXDXPRXXRAXAXPPXPXEKXXXXV 725
G PPP P G G PP P + PP P
Sbjct: 46 GAPPPFL--APPPPPPPGPPPPHQPQFNFGPGPPQQQQPPPPPQMYYQPPPPPPPYGVNS 103
Query: 726 GSXPPPPP 749
PPPPP
Sbjct: 104 SQPPPPPP 111
>05_07_0200 -
28368890-28369021,28369169-28369303,28369918-28369947,
28370019-28370093,28370222-28370333,28370440-28370621,
28370723-28370854,28372193-28373479
Length = 694
Score = 28.7 bits (61), Expect = 8.4
Identities = 12/37 (32%), Positives = 14/37 (37%)
Frame = +3
Query: 639 PPPSXXDXPRXXRAXAXPPXPXEKXXXXVGSXPPPPP 749
PPP P R+ + P P G PPPP
Sbjct: 309 PPPPPPPPPPMPRSRSASPSPSTSSSGSAGPPAPPPP 345
>04_04_1106 -
30948626-30948724,30948841-30949176,30949231-30949353,
30949425-30949517,30949603-30949806,30949884-30950134,
30951011-30952391,30952737-30953174
Length = 974
Score = 28.7 bits (61), Expect = 8.4
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +3
Query: 738 PPPPXRXRXXPLQAGGREXXGGRLX*G 818
PPPP R + PL G + G RL G
Sbjct: 57 PPPPPRRKALPLPRGAADVRGARLPCG 83
>02_05_0742 + 31415862-31417088
Length = 408
Score = 28.7 bits (61), Expect = 8.4
Identities = 17/56 (30%), Positives = 18/56 (32%)
Frame = -1
Query: 806 PAPXXLXPXXLQGXXPXPXGGGRGXGXHGXPXFFGWTRGXRXRXXXPGXIXXGGXG 639
PAP L P G P GGG G G G R + GG G
Sbjct: 325 PAPMALLPGQQLGLGPVGGGGGGGGGGEGHMGILAALNAYRTQAATDAAGQQGGGG 380
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,931,489
Number of Sequences: 37544
Number of extensions: 516192
Number of successful extensions: 3878
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1637
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3427
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3211228900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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