Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_FL5_G08
(1076 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 40 0.003
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 40 0.003
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 40 0.003
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 35 0.087
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 35 0.087
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 35 0.087
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 32 0.81
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 32 0.81
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 31 1.4
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 31 1.4
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 31 1.9
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 31 1.9
Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical pr... 30 2.5
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 30 2.5
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 30 2.5
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 30 2.5
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 30 3.3
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 30 3.3
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 5.7
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 7.6
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 7.6
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 29 7.6
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 28 10.0
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 28 10.0
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 39.9 bits (89), Expect = 0.003
Identities = 24/87 (27%), Positives = 29/87 (33%)
Frame = +3
Query: 483 PXXSFXXPXXPRXXXXGAXXXGXPPPXXXGGAPXLSXSGXXRXXXSXXAXGXPPPSXXDX 662
P P P G PPP G+P +G + PPP
Sbjct: 232 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTG---SPPPPPAGGS 288
Query: 663 PRXXRAXAXPPXPXEKXXXXVGSXPPP 743
P RA + PP P + GS PPP
Sbjct: 289 PPPPRAGSPPPPPPPRGSPPTGSLPPP 315
Score = 39.1 bits (87), Expect = 0.005
Identities = 26/75 (34%), Positives = 29/75 (38%), Gaps = 2/75 (2%)
Frame = +3
Query: 552 PPPXXXGGAPXLSXSGXXRXXXSXXAXGXPPPSXXDXPRXXRAXAXPPXPX--EKXXXXV 725
PPP G+P L+ SG A G PPP P + PP P
Sbjct: 238 PPPPPPKGSPPLAGSGSP---PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRA 294
Query: 726 GSXPPPPPXRXRXXP 770
GS PPPPP R P
Sbjct: 295 GSPPPPPP--PRGSP 307
Score = 35.1 bits (77), Expect = 0.087
Identities = 24/93 (25%), Positives = 29/93 (31%), Gaps = 4/93 (4%)
Frame = +3
Query: 483 PXXSFXXPXXPRXXXXGAXXXGXPPPXXXGGAPXLSXSGXXRXXX----SXXAXGXPPPS 650
P + P PR G PPP GG+P +G S PPP
Sbjct: 257 PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQ 316
Query: 651 XXDXPRXXRAXAXPPXPXEKXXXXVGSXPPPPP 749
P + PP P +K S P P
Sbjct: 317 AGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSP 349
Score = 30.3 bits (65), Expect = 2.5
Identities = 23/78 (29%), Positives = 24/78 (30%)
Frame = +1
Query: 730 PXPRPPPXGXGXLPCRXXGXXXXGAGXRKAGSXXAXGPPPXXXXPPGGXXXSAXRXXAXX 909
P P PPP G L G+G PPP PP S A
Sbjct: 237 PPPPPPPKGSPPL---------AGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 287
Query: 910 PLXXXRLXXXPPPPPSPG 963
R PPPPP G
Sbjct: 288 SPPPPRAGSPPPPPPPRG 305
Score = 30.3 bits (65), Expect = 2.5
Identities = 15/49 (30%), Positives = 18/49 (36%)
Frame = +3
Query: 639 PPPSXXDXPRXXRAXAXPPXPXEKXXXXVGSXPPPPPXRXRXXPLQAGG 785
PPP P + + PP P + PPPP P AGG
Sbjct: 239 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 287
Score = 28.3 bits (60), Expect = 10.0
Identities = 27/102 (26%), Positives = 29/102 (28%), Gaps = 3/102 (2%)
Frame = +1
Query: 550 APPPXXPXGPXXSPXRXXXXHXCXXXXXXXPXPPXXXLPGXXXRXRXPRVXPKXXGXPWX 729
+PPP P P SP P PP P P P G P
Sbjct: 236 SPPPPPP--PKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPP--PPPAGGSPPP 291
Query: 730 PX---PRPPPXGXGXLPCRXXGXXXXGAGXRKAGSXXAXGPP 846
P P PPP G P G AG+ PP
Sbjct: 292 PRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 333
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 39.9 bits (89), Expect = 0.003
Identities = 24/87 (27%), Positives = 29/87 (33%)
Frame = +3
Query: 483 PXXSFXXPXXPRXXXXGAXXXGXPPPXXXGGAPXLSXSGXXRXXXSXXAXGXPPPSXXDX 662
P P P G PPP G+P +G + PPP
Sbjct: 253 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTG---SPPPPPAGGS 309
Query: 663 PRXXRAXAXPPXPXEKXXXXVGSXPPP 743
P RA + PP P + GS PPP
Sbjct: 310 PPPPRAGSPPPPPPPRGSPPTGSLPPP 336
Score = 39.1 bits (87), Expect = 0.005
Identities = 26/75 (34%), Positives = 29/75 (38%), Gaps = 2/75 (2%)
Frame = +3
Query: 552 PPPXXXGGAPXLSXSGXXRXXXSXXAXGXPPPSXXDXPRXXRAXAXPPXPX--EKXXXXV 725
PPP G+P L+ SG A G PPP P + PP P
Sbjct: 259 PPPPPPKGSPPLAGSGSP---PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRA 315
Query: 726 GSXPPPPPXRXRXXP 770
GS PPPPP R P
Sbjct: 316 GSPPPPPP--PRGSP 328
Score = 35.1 bits (77), Expect = 0.087
Identities = 24/93 (25%), Positives = 29/93 (31%), Gaps = 4/93 (4%)
Frame = +3
Query: 483 PXXSFXXPXXPRXXXXGAXXXGXPPPXXXGGAPXLSXSGXXRXXX----SXXAXGXPPPS 650
P + P PR G PPP GG+P +G S PPP
Sbjct: 278 PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQ 337
Query: 651 XXDXPRXXRAXAXPPXPXEKXXXXVGSXPPPPP 749
P + PP P +K S P P
Sbjct: 338 AGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSP 370
Score = 30.3 bits (65), Expect = 2.5
Identities = 23/78 (29%), Positives = 24/78 (30%)
Frame = +1
Query: 730 PXPRPPPXGXGXLPCRXXGXXXXGAGXRKAGSXXAXGPPPXXXXPPGGXXXSAXRXXAXX 909
P P PPP G L G+G PPP PP S A
Sbjct: 258 PPPPPPPKGSPPL---------AGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 308
Query: 910 PLXXXRLXXXPPPPPSPG 963
R PPPPP G
Sbjct: 309 SPPPPRAGSPPPPPPPRG 326
Score = 30.3 bits (65), Expect = 2.5
Identities = 15/49 (30%), Positives = 18/49 (36%)
Frame = +3
Query: 639 PPPSXXDXPRXXRAXAXPPXPXEKXXXXVGSXPPPPPXRXRXXPLQAGG 785
PPP P + + PP P + PPPP P AGG
Sbjct: 260 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 308
Score = 28.3 bits (60), Expect = 10.0
Identities = 27/102 (26%), Positives = 29/102 (28%), Gaps = 3/102 (2%)
Frame = +1
Query: 550 APPPXXPXGPXXSPXRXXXXHXCXXXXXXXPXPPXXXLPGXXXRXRXPRVXPKXXGXPWX 729
+PPP P P SP P PP P P P G P
Sbjct: 257 SPPPPPP--PKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPP--PPPAGGSPPP 312
Query: 730 PX---PRPPPXGXGXLPCRXXGXXXXGAGXRKAGSXXAXGPP 846
P P PPP G P G AG+ PP
Sbjct: 313 PRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 354
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 39.9 bits (89), Expect = 0.003
Identities = 24/87 (27%), Positives = 29/87 (33%)
Frame = +3
Query: 483 PXXSFXXPXXPRXXXXGAXXXGXPPPXXXGGAPXLSXSGXXRXXXSXXAXGXPPPSXXDX 662
P P P G PPP G+P +G + PPP
Sbjct: 238 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTG---SPPPPPAGGS 294
Query: 663 PRXXRAXAXPPXPXEKXXXXVGSXPPP 743
P RA + PP P + GS PPP
Sbjct: 295 PPPPRAGSPPPPPPPRGSPPTGSLPPP 321
Score = 39.1 bits (87), Expect = 0.005
Identities = 26/75 (34%), Positives = 29/75 (38%), Gaps = 2/75 (2%)
Frame = +3
Query: 552 PPPXXXGGAPXLSXSGXXRXXXSXXAXGXPPPSXXDXPRXXRAXAXPPXPX--EKXXXXV 725
PPP G+P L+ SG A G PPP P + PP P
Sbjct: 244 PPPPPPKGSPPLAGSGSP---PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRA 300
Query: 726 GSXPPPPPXRXRXXP 770
GS PPPPP R P
Sbjct: 301 GSPPPPPP--PRGSP 313
Score = 35.1 bits (77), Expect = 0.087
Identities = 24/93 (25%), Positives = 29/93 (31%), Gaps = 4/93 (4%)
Frame = +3
Query: 483 PXXSFXXPXXPRXXXXGAXXXGXPPPXXXGGAPXLSXSGXXRXXX----SXXAXGXPPPS 650
P + P PR G PPP GG+P +G S PPP
Sbjct: 263 PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQ 322
Query: 651 XXDXPRXXRAXAXPPXPXEKXXXXVGSXPPPPP 749
P + PP P +K S P P
Sbjct: 323 AGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSP 355
Score = 30.3 bits (65), Expect = 2.5
Identities = 23/78 (29%), Positives = 24/78 (30%)
Frame = +1
Query: 730 PXPRPPPXGXGXLPCRXXGXXXXGAGXRKAGSXXAXGPPPXXXXPPGGXXXSAXRXXAXX 909
P P PPP G L G+G PPP PP S A
Sbjct: 243 PPPPPPPKGSPPL---------AGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 293
Query: 910 PLXXXRLXXXPPPPPSPG 963
R PPPPP G
Sbjct: 294 SPPPPRAGSPPPPPPPRG 311
Score = 30.3 bits (65), Expect = 2.5
Identities = 15/49 (30%), Positives = 18/49 (36%)
Frame = +3
Query: 639 PPPSXXDXPRXXRAXAXPPXPXEKXXXXVGSXPPPPPXRXRXXPLQAGG 785
PPP P + + PP P + PPPP P AGG
Sbjct: 245 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 293
Score = 28.3 bits (60), Expect = 10.0
Identities = 27/102 (26%), Positives = 29/102 (28%), Gaps = 3/102 (2%)
Frame = +1
Query: 550 APPPXXPXGPXXSPXRXXXXHXCXXXXXXXPXPPXXXLPGXXXRXRXPRVXPKXXGXPWX 729
+PPP P P SP P PP P P P G P
Sbjct: 242 SPPPPPP--PKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPP--PPPAGGSPPP 297
Query: 730 PX---PRPPPXGXGXLPCRXXGXXXXGAGXRKAGSXXAXGPP 846
P P PPP G P G AG+ PP
Sbjct: 298 PRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 339
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 35.1 bits (77), Expect = 0.087
Identities = 21/76 (27%), Positives = 24/76 (31%)
Frame = +3
Query: 546 GXPPPXXXGGAPXLSXSGXXRXXXSXXAXGXPPPSXXDXPRXXRAXAXPPXPXEKXXXXV 725
G PPP GG P ++ G PP S P PP P
Sbjct: 725 GPPPPPPPGGLPPITGG----PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGF 780
Query: 726 GSXPPPPPXRXRXXPL 773
PPPPP P+
Sbjct: 781 KGGPPPPPPPGMFAPM 796
Score = 31.9 bits (69), Expect = 0.81
Identities = 26/87 (29%), Positives = 26/87 (29%)
Frame = +1
Query: 703 PKXXGXPWXPXPRPPPXGXGXLPCRXXGXXXXGAGXRKAGSXXAXGPPPXXXXPPGGXXX 882
P G P PPP G LP G G G PP PPGG
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPP---PGGLPPISGGPPPPPPPPGGCPP 770
Query: 883 SAXRXXAXXPLXXXRLXXXPPPPPSPG 963
P PPPPP PG
Sbjct: 771 PPP------PPPPGGFKGGPPPPPPPG 791
Score = 31.1 bits (67), Expect = 1.4
Identities = 25/89 (28%), Positives = 27/89 (30%)
Frame = +3
Query: 483 PXXSFXXPXXPRXXXXGAXXXGXPPPXXXGGAPXLSXSGXXRXXXSXXAXGXPPPSXXDX 662
P + P P G PPP GG P +S G PPP
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPIS--------------GGPPP----- 760
Query: 663 PRXXRAXAXPPXPXEKXXXXVGSXPPPPP 749
P PP P G PPPPP
Sbjct: 761 PPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
Score = 29.9 bits (64), Expect = 3.3
Identities = 18/54 (33%), Positives = 20/54 (37%)
Frame = +1
Query: 802 AGXRKAGSXXAXGPPPXXXXPPGGXXXSAXRXXAXXPLXXXRLXXXPPPPPSPG 963
AG A GPPP PPG + P + PPPPP PG
Sbjct: 700 AGGSSALPPITGGPPP----PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPG 749
Score = 28.7 bits (61), Expect = 7.6
Identities = 22/78 (28%), Positives = 24/78 (30%), Gaps = 1/78 (1%)
Frame = +3
Query: 552 PPPXXXG-GAPXLSXSGXXRXXXSXXAXGXPPPSXXDXPRXXRAXAXPPXPXEKXXXXVG 728
PPP AP S G G PPP P PP P +
Sbjct: 686 PPPTKMNLSAPSTSAGGSSALPP---ITGGPPPPPGLPPI---TGGPPPPPPPGGLPPIT 739
Query: 729 SXPPPPPXRXRXXPLQAG 782
PPPPP P+ G
Sbjct: 740 GGPPPPPPPGGLPPISGG 757
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 35.1 bits (77), Expect = 0.087
Identities = 21/76 (27%), Positives = 24/76 (31%)
Frame = +3
Query: 546 GXPPPXXXGGAPXLSXSGXXRXXXSXXAXGXPPPSXXDXPRXXRAXAXPPXPXEKXXXXV 725
G PPP GG P ++ G PP S P PP P
Sbjct: 725 GPPPPPPPGGLPPITGG----PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGF 780
Query: 726 GSXPPPPPXRXRXXPL 773
PPPPP P+
Sbjct: 781 KGGPPPPPPPGMFAPM 796
Score = 31.9 bits (69), Expect = 0.81
Identities = 26/87 (29%), Positives = 26/87 (29%)
Frame = +1
Query: 703 PKXXGXPWXPXPRPPPXGXGXLPCRXXGXXXXGAGXRKAGSXXAXGPPPXXXXPPGGXXX 882
P G P PPP G LP G G G PP PPGG
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPP---PGGLPPISGGPPPPPPPPGGCPP 770
Query: 883 SAXRXXAXXPLXXXRLXXXPPPPPSPG 963
P PPPPP PG
Sbjct: 771 PPP------PPPPGGFKGGPPPPPPPG 791
Score = 31.1 bits (67), Expect = 1.4
Identities = 25/89 (28%), Positives = 27/89 (30%)
Frame = +3
Query: 483 PXXSFXXPXXPRXXXXGAXXXGXPPPXXXGGAPXLSXSGXXRXXXSXXAXGXPPPSXXDX 662
P + P P G PPP GG P +S G PPP
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPIS--------------GGPPP----- 760
Query: 663 PRXXRAXAXPPXPXEKXXXXVGSXPPPPP 749
P PP P G PPPPP
Sbjct: 761 PPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
Score = 29.9 bits (64), Expect = 3.3
Identities = 18/54 (33%), Positives = 20/54 (37%)
Frame = +1
Query: 802 AGXRKAGSXXAXGPPPXXXXPPGGXXXSAXRXXAXXPLXXXRLXXXPPPPPSPG 963
AG A GPPP PPG + P + PPPPP PG
Sbjct: 700 AGGSSALPPITGGPPP----PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPG 749
Score = 28.7 bits (61), Expect = 7.6
Identities = 22/78 (28%), Positives = 24/78 (30%), Gaps = 1/78 (1%)
Frame = +3
Query: 552 PPPXXXG-GAPXLSXSGXXRXXXSXXAXGXPPPSXXDXPRXXRAXAXPPXPXEKXXXXVG 728
PPP AP S G G PPP P PP P +
Sbjct: 686 PPPTKMNLSAPSTSAGGSSALPP---ITGGPPPPPGLPPI---TGGPPPPPPPGGLPPIT 739
Query: 729 SXPPPPPXRXRXXPLQAG 782
PPPPP P+ G
Sbjct: 740 GGPPPPPPPGGLPPISGG 757
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 35.1 bits (77), Expect = 0.087
Identities = 21/76 (27%), Positives = 24/76 (31%)
Frame = +3
Query: 546 GXPPPXXXGGAPXLSXSGXXRXXXSXXAXGXPPPSXXDXPRXXRAXAXPPXPXEKXXXXV 725
G PPP GG P ++ G PP S P PP P
Sbjct: 308 GPPPPPPPGGLPPITGG----PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGF 363
Query: 726 GSXPPPPPXRXRXXPL 773
PPPPP P+
Sbjct: 364 KGGPPPPPPPGMFAPM 379
Score = 31.9 bits (69), Expect = 0.81
Identities = 26/87 (29%), Positives = 26/87 (29%)
Frame = +1
Query: 703 PKXXGXPWXPXPRPPPXGXGXLPCRXXGXXXXGAGXRKAGSXXAXGPPPXXXXPPGGXXX 882
P G P PPP G LP G G G PP PPGG
Sbjct: 297 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPP---PGGLPPISGGPPPPPPPPGGCPP 353
Query: 883 SAXRXXAXXPLXXXRLXXXPPPPPSPG 963
P PPPPP PG
Sbjct: 354 PPP------PPPPGGFKGGPPPPPPPG 374
Score = 31.1 bits (67), Expect = 1.4
Identities = 25/89 (28%), Positives = 27/89 (30%)
Frame = +3
Query: 483 PXXSFXXPXXPRXXXXGAXXXGXPPPXXXGGAPXLSXSGXXRXXXSXXAXGXPPPSXXDX 662
P + P P G PPP GG P +S G PPP
Sbjct: 303 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPIS--------------GGPPP----- 343
Query: 663 PRXXRAXAXPPXPXEKXXXXVGSXPPPPP 749
P PP P G PPPPP
Sbjct: 344 PPPPPGGCPPPPPPPPPGGFKGGPPPPPP 372
Score = 29.9 bits (64), Expect = 3.3
Identities = 18/54 (33%), Positives = 20/54 (37%)
Frame = +1
Query: 802 AGXRKAGSXXAXGPPPXXXXPPGGXXXSAXRXXAXXPLXXXRLXXXPPPPPSPG 963
AG A GPPP PPG + P + PPPPP PG
Sbjct: 283 AGGSSALPPITGGPPP----PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPG 332
Score = 28.7 bits (61), Expect = 7.6
Identities = 22/78 (28%), Positives = 24/78 (30%), Gaps = 1/78 (1%)
Frame = +3
Query: 552 PPPXXXG-GAPXLSXSGXXRXXXSXXAXGXPPPSXXDXPRXXRAXAXPPXPXEKXXXXVG 728
PPP AP S G G PPP P PP P +
Sbjct: 269 PPPTKMNLSAPSTSAGGSSALPP---ITGGPPPPPGLPPI---TGGPPPPPPPGGLPPIT 322
Query: 729 SXPPPPPXRXRXXPLQAG 782
PPPPP P+ G
Sbjct: 323 GGPPPPPPPGGLPPISGG 340
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.9 bits (69), Expect = 0.81
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = +3
Query: 639 PPPSXXDXPRXXRAXAXPPXPXEKXXXXVGSXPPPPPXRXR 761
PPP P PP P +G PPPPP R
Sbjct: 302 PPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMR 342
Score = 31.5 bits (68), Expect = 1.1
Identities = 19/68 (27%), Positives = 20/68 (29%), Gaps = 2/68 (2%)
Frame = +3
Query: 552 PPPXXXGGAPXLSXSGXXRXXXSXXAXGXPPPSXXDXPRXXRAXAXPPXPXEKXXXXV-- 725
PPP G P + G PPP P PP P
Sbjct: 319 PPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGH 378
Query: 726 GSXPPPPP 749
G PPPPP
Sbjct: 379 GMIPPPPP 386
Score = 31.1 bits (67), Expect = 1.4
Identities = 29/104 (27%), Positives = 29/104 (27%)
Frame = +1
Query: 646 PPXXXLPGXXXRXRXPRVXPKXXGXPWXPXPRPPPXGXGXLPCRXXGXXXXGAGXRKAGS 825
PP PG PR P W P P PPP G P G R
Sbjct: 275 PPMPPTPGMT-----PRPPPPPSSGMWPPPP-PPPPGRTPGPPGMPGMPPPPPPSRFGPP 328
Query: 826 XXAXGPPPXXXXPPGGXXXSAXRXXAXXPLXXXRLXXXPPPPPS 957
PPP PPG PPPPPS
Sbjct: 329 GMGGMPPP---PPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPS 369
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.9 bits (69), Expect = 0.81
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = +3
Query: 639 PPPSXXDXPRXXRAXAXPPXPXEKXXXXVGSXPPPPPXRXR 761
PPP P PP P +G PPPPP R
Sbjct: 312 PPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMR 352
Score = 31.5 bits (68), Expect = 1.1
Identities = 19/68 (27%), Positives = 20/68 (29%), Gaps = 2/68 (2%)
Frame = +3
Query: 552 PPPXXXGGAPXLSXSGXXRXXXSXXAXGXPPPSXXDXPRXXRAXAXPPXPXEKXXXXV-- 725
PPP G P + G PPP P PP P
Sbjct: 329 PPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGH 388
Query: 726 GSXPPPPP 749
G PPPPP
Sbjct: 389 GMIPPPPP 396
Score = 31.1 bits (67), Expect = 1.4
Identities = 29/104 (27%), Positives = 29/104 (27%)
Frame = +1
Query: 646 PPXXXLPGXXXRXRXPRVXPKXXGXPWXPXPRPPPXGXGXLPCRXXGXXXXGAGXRKAGS 825
PP PG PR P W P P PPP G P G R
Sbjct: 285 PPMPPTPGMT-----PRPPPPPSSGMWPPPP-PPPPGRTPGPPGMPGMPPPPPPSRFGPP 338
Query: 826 XXAXGPPPXXXXPPGGXXXSAXRXXAXXPLXXXRLXXXPPPPPS 957
PPP PPG PPPPPS
Sbjct: 339 GMGGMPPP---PPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPS 379
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 31.1 bits (67), Expect = 1.4
Identities = 24/88 (27%), Positives = 27/88 (30%), Gaps = 2/88 (2%)
Frame = +3
Query: 546 GXPPPXXXGGAPXLSXSGXXRXXXSXXAXGXPPPSXXDXPRXXRAXAXPPXPX--EKXXX 719
G PPP G P R PPP P+ R PP P
Sbjct: 692 GPPPPGQPYGPPGGYPPQQQRPPYQAQPYPGPPP-----PQQQRGYGYPPPPQPGHPYQQ 746
Query: 720 XVGSXPPPPPXRXRXXPLQAGGREXXGG 803
G PPPP + + Q G GG
Sbjct: 747 PYGQMPPPPHGQYQPQQQQGGPMGPPGG 774
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 31.1 bits (67), Expect = 1.4
Identities = 24/88 (27%), Positives = 27/88 (30%), Gaps = 2/88 (2%)
Frame = +3
Query: 546 GXPPPXXXGGAPXLSXSGXXRXXXSXXAXGXPPPSXXDXPRXXRAXAXPPXPX--EKXXX 719
G PPP G P R PPP P+ R PP P
Sbjct: 692 GPPPPGQPYGPPGGYPPQQQRPPYQAQPYPGPPP-----PQQQRGYGYPPPPQPGHPYQQ 746
Query: 720 XVGSXPPPPPXRXRXXPLQAGGREXXGG 803
G PPPP + + Q G GG
Sbjct: 747 PYGQMPPPPHGQYQPQQQQGGPMGPPGG 774
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 30.7 bits (66), Expect = 1.9
Identities = 15/46 (32%), Positives = 16/46 (34%)
Frame = +1
Query: 736 PRPPPXGXGXLPCRXXGXXXXGAGXRKAGSXXAXGPPPXXXXPPGG 873
P P G G PC G G A + PPP P GG
Sbjct: 30 PSQPSCGGGAPPCSSSSYATGGGGGSYAAAPALPPPPPPPPAPIGG 75
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 30.7 bits (66), Expect = 1.9
Identities = 15/46 (32%), Positives = 16/46 (34%)
Frame = +1
Query: 736 PRPPPXGXGXLPCRXXGXXXXGAGXRKAGSXXAXGPPPXXXXPPGG 873
P P G G PC G G A + PPP P GG
Sbjct: 30 PSQPSCGGGAPPCSSSSYATGGGGGSYAAAPALPPPPPPPPAPIGG 75
>Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical
protein F14F7.1 protein.
Length = 305
Score = 30.3 bits (65), Expect = 2.5
Identities = 21/83 (25%), Positives = 21/83 (25%)
Frame = +1
Query: 349 GGGXXPXPXXXFFXGPXGPPXXXXXXXXXXAXKKKKXTXGGXXGXPXXLSXXRXXPXQXX 528
GGG P P GP G P GG G P
Sbjct: 178 GGGAAPRPGPPGPKGPRGAPGNSGRAGAPGQPGNDAHGYGGGVGAPGPAGPRGAPGPAGH 237
Query: 529 XGPXGXXAPPPXXPXGPXXSPXR 597
G G P P P G P R
Sbjct: 238 PGSSGGGRPGPAGPKGAPGQPGR 260
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 30.3 bits (65), Expect = 2.5
Identities = 32/126 (25%), Positives = 33/126 (26%), Gaps = 1/126 (0%)
Frame = +1
Query: 514 PXQXXXGPXGXXAPPPXXPXGPXXSPXRXXXXHXCXXXXXXXPXPPXXXLPGXXXRXRXP 693
P Q APPP P P PP PG
Sbjct: 338 PPQGGPPQGSFGAPPPQQFHAPSPQSFGGPPPPVSSAPGNFAP-PPQSGPPGAFAPPPSA 396
Query: 694 RVXPKXXGXPWXPXPRPPPXGXGXLPCRXXGXXXXGA-GXRKAGSXXAXGPPPXXXXPPG 870
P+ G P P PPP G G G G G A GPPP P G
Sbjct: 397 FGAPQGPGGPGGYGP-PPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPPVG 455
Query: 871 GXXXSA 888
A
Sbjct: 456 APPPGA 461
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 30.3 bits (65), Expect = 2.5
Identities = 23/82 (28%), Positives = 25/82 (30%)
Frame = -1
Query: 749 GGGRGXGXHGXPXFFGWTRGXRXRXXXPGXIXXGGXGXXXXXXXXXXXXXXRXGEXXGPX 570
GGGRG G G +G G GG G R G+ GP
Sbjct: 93 GGGRGGGGRGD---WGGNNNGGGGNWGGGGNNDGGWGGNNGGGGGGRGGGGRGGDGRGPP 149
Query: 569 GXXGGGAXXPXGPXXXXXGXXR 504
G GGG G G R
Sbjct: 150 GSNGGGDWGGNGGGGRGGGGGR 171
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 30.3 bits (65), Expect = 2.5
Identities = 20/69 (28%), Positives = 21/69 (30%), Gaps = 2/69 (2%)
Frame = +3
Query: 546 GXPPPXXXGGAPXLSXSGXX--RXXXSXXAXGXPPPSXXDXPRXXRAXAXPPXPXEKXXX 719
G PPP G LS G R G PPP P+ A
Sbjct: 166 GSPPPPPTGEPQDLSTEGNASRRPPPPPKGTGTPPPPPTGEPQDLSAEGYASRRPPPPPK 225
Query: 720 XVGSXPPPP 746
GS PPP
Sbjct: 226 GTGSPTPPP 234
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.9 bits (64), Expect = 3.3
Identities = 18/49 (36%), Positives = 19/49 (38%)
Frame = +3
Query: 639 PPPSXXDXPRXXRAXAXPPXPXEKXXXXVGSXPPPPPXRXRXXPLQAGG 785
PP S P A PP P VG+ PPPP P AGG
Sbjct: 616 PPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPP--PPPPPSGAGG 662
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.9 bits (64), Expect = 3.3
Identities = 18/49 (36%), Positives = 19/49 (38%)
Frame = +3
Query: 639 PPPSXXDXPRXXRAXAXPPXPXEKXXXXVGSXPPPPPXRXRXXPLQAGG 785
PP S P A PP P VG+ PPPP P AGG
Sbjct: 442 PPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPP--PPPPPSGAGG 488
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 29.5 bits (63), Expect = 4.3
Identities = 28/112 (25%), Positives = 30/112 (26%), Gaps = 5/112 (4%)
Frame = +1
Query: 640 PXPPXXXLPGXXXRXRXPRVXPKXXGXPWXPXPRPPPXGXGXLPCR-XXGXXXXGAGXRK 816
P PP LP P P G P P PP G + G
Sbjct: 473 PGPPSSLLPLINTNAPPPPPMPSINGHAPNPPPPPPLLGIAPMSTNAPPPPPMPGMAPLS 532
Query: 817 AGSXXAXGPPP----XXXXPPGGXXXSAXRXXAXXPLXXXRLXXXPPPPPSP 960
G+ PPP PP A L PPPPP P
Sbjct: 533 TGAPTPPPPPPVGMANGGPPPPPPLPLDLLKGAVAGLKSVPGGPPPPPPPPP 584
Score = 29.5 bits (63), Expect = 4.3
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = +2
Query: 503 AAXXPXXPXXGXXXGXPPPPPXRXGPXXLLXGXXXXTXVXXGXXXPP 643
A P P G G PPPPP P LL G G PP
Sbjct: 535 APTPPPPPPVGMANGGPPPPPPL--PLDLLKGAVAGLKSVPGGPPPP 579
Score = 28.3 bits (60), Expect = 10.0
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +3
Query: 639 PPPSXXDXPRXXRAXAXPPXPXEKXXXXVGSXPPPPP 749
PPP P A PP P PPPPP
Sbjct: 506 PPPLLGIAPMSTNAPPPPPMPGMAPLSTGAPTPPPPP 542
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.1 bits (62), Expect = 5.7
Identities = 21/81 (25%), Positives = 23/81 (28%), Gaps = 2/81 (2%)
Frame = +3
Query: 552 PPPXXXGGAPXLSXSGXXRXXXSXXAXGXPPPSXX--DXPRXXRAXAXPPXPXEKXXXXV 725
PPP G P G A G PPP P PP P V
Sbjct: 66 PPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGLGV 125
Query: 726 GSXPPPPPXRXRXXPLQAGGR 788
PP P + GG+
Sbjct: 126 APQPPRPKTPVNPALAKLGGK 146
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.1 bits (62), Expect = 5.7
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +3
Query: 678 AXAXPPXPXEKXXXXVGSXPPPPPXRXRXXP 770
A PP P K S PPPPP R P
Sbjct: 120 ASPPPPPPPRKSRAGGSSPPPPPPPRVPRTP 150
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 7.6
Identities = 35/140 (25%), Positives = 35/140 (25%)
Frame = -1
Query: 953 GGGGGXXXRRXLXXGXXAXXRXAEXXXPPGGXXXXGGGPXAXXXPALRKPAPXXLXPXXL 774
GGGGG G A P GG GGG PAP
Sbjct: 27 GGGGGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAP--CGGGCG 84
Query: 773 QGXXPXPXGGGRGXGXHGXPXFFGWTRGXRXRXXXPGXIXXGGXGXXXXXXXXXXXXXXR 594
G GGG G G G G G GG G
Sbjct: 85 GGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSS 144
Query: 593 XGEXXGPXGXXGGGAXXPXG 534
G G G GGG G
Sbjct: 145 GGCGGGSSGGCGGGGGGGCG 164
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 7.6
Identities = 35/140 (25%), Positives = 35/140 (25%)
Frame = -1
Query: 953 GGGGGXXXRRXLXXGXXAXXRXAEXXXPPGGXXXXGGGPXAXXXPALRKPAPXXLXPXXL 774
GGGGG G A P GG GGG PAP
Sbjct: 27 GGGGGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAP--CGGGCG 84
Query: 773 QGXXPXPXGGGRGXGXHGXPXFFGWTRGXRXRXXXPGXIXXGGXGXXXXXXXXXXXXXXR 594
G GGG G G G G G GG G
Sbjct: 85 GGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSS 144
Query: 593 XGEXXGPXGXXGGGAXXPXG 534
G G G GGG G
Sbjct: 145 GGCGGGSSGGCGGGGGGGCG 164
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 28.7 bits (61), Expect = 7.6
Identities = 27/108 (25%), Positives = 30/108 (27%), Gaps = 2/108 (1%)
Frame = +1
Query: 646 PPXXXLPGXXXRXRXPRVXPKXXGXPWXPXPRPPPXGXGXLPCRXXGXXXXGAGXRKAGS 825
P LPG R P PW P P+ PP G P G G
Sbjct: 120 PGAPGLPGNPGRPPQQPCEP-ITPPPWKPCPQGPPGPPG--PPGPPGDSGEPGSPGLPGQ 176
Query: 826 XXAXGP--PPXXXXPPGGXXXSAXRXXAXXPLXXXRLXXXPPPPPSPG 963
A G P PPG + P + P PP G
Sbjct: 177 DAAPGEPGPKGPKGPPGAPGAPEHQESQECPRGEPLIPGEPGPPGEAG 224
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.3 bits (60), Expect = 10.0
Identities = 13/45 (28%), Positives = 16/45 (35%)
Frame = +3
Query: 639 PPPSXXDXPRXXRAXAXPPXPXEKXXXXVGSXPPPPPXRXRXXPL 773
PPP+ P PP P + PPP P + PL
Sbjct: 1361 PPPTMSKAPTGVPLPVPPPPPLFSPSMILPPPPPPLPSEEKKNPL 1405
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.3 bits (60), Expect = 10.0
Identities = 13/37 (35%), Positives = 15/37 (40%)
Frame = +3
Query: 639 PPPSXXDXPRXXRAXAXPPXPXEKXXXXVGSXPPPPP 749
PPP P+ PP P +G PPPPP
Sbjct: 561 PPPPPPPLPQNLSGAPPPPPP---PPPMLGGPPPPPP 594
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,806,649
Number of Sequences: 27780
Number of extensions: 316775
Number of successful extensions: 1633
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1287
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2887577688
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -